| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gntV [H]
Identifier: 34498412
GI number: 34498412
Start: 3237228
End: 3237785
Strand: Direct
Name: gntV [H]
Synonym: CV_2957
Alternate gene names: 34498412
Gene position: 3237228-3237785 (Clockwise)
Preceding gene: 34498411
Following gene: 34498413
Centisome position: 68.14
GC content: 69.0
Gene sequence:
>558_bases TTGCCATCCAGCCGGCCCGCGCCGGCTATCCTTTCACTTGCAAATGTTAGCGCTAACATGAAATACGGCAATATCGTGGT GATGGGCGTGGCCGGCTGCGGCAAAAGCAGCGTGGGCCGCCTGCTGGCCGAGGCCATCGGCGCCCGCTTCATCGAAGGCG ACAGTTTCCACCCTCCCGAGAACATCCAACGCATGCGCGCCGGCATTCCGCTGGGCGACGACGACCGCGCCGGCTGGCTG GCCAACCTGGCAGCCCAGCTGCGCCAGGGCCGCGACAGCGGCGAACCGCTGGTGCTGGCCTGCTCGGCGCTGAAGCGCCG CTACCGCGACGTGCTGCGCGACGGCGACCCCGGCCTGCGCTTCGTCCACCTGTACGGCGACAAGGCGTTGATCGCCGAGC GCATGCGCGAGCGCAGCGGCCACTTCATGCCGGAAAGCCTGCTGGACAGCCAGTTCCGCGACCTGGAAGCCCCCGGCGCC GATGAAAGCGCGATTCCCTGCGACGTCAGCCTGCCGCCCGAGGCGCTGTTGCCGCGCATCCTGGCCGAGCTGGGCTAG
Upstream 100 bases:
>100_bases TCATTGCAAGATTGTTGCGATACCACTACAGCATGGTCCGGACAATCGATGAAACTTGATCCAACTGCTTGTTTCCCGAT TTTTGTTAGCGCTAACATCA
Downstream 100 bases:
>100_bases CCCCGAAGATTCAACGCAAAGGCAGTAAGAAAGAGGAGAACAACAATGCACGCCCCATCCCCGCAACACAACAAGATTCC CGCCCGTCGCTGGCGCATAG
Product: gluconokinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPSSRPAPAILSLANVSANMKYGNIVVMGVAGCGKSSVGRLLAEAIGARFIEGDSFHPPENIQRMRAGIPLGDDDRAGWL ANLAAQLRQGRDSGEPLVLACSALKRRYRDVLRDGDPGLRFVHLYGDKALIAERMRERSGHFMPESLLDSQFRDLEAPGA DESAIPCDVSLPPEALLPRILAELG
Sequences:
>Translated_185_residues MPSSRPAPAILSLANVSANMKYGNIVVMGVAGCGKSSVGRLLAEAIGARFIEGDSFHPPENIQRMRAGIPLGDDDRAGWL ANLAAQLRQGRDSGEPLVLACSALKRRYRDVLRDGDPGLRFVHLYGDKALIAERMRERSGHFMPESLLDSQFRDLEAPGA DESAIPCDVSLPPEALLPRILAELG >Mature_184_residues PSSRPAPAILSLANVSANMKYGNIVVMGVAGCGKSSVGRLLAEAIGARFIEGDSFHPPENIQRMRAGIPLGDDDRAGWLA NLAAQLRQGRDSGEPLVLACSALKRRYRDVLRDGDPGLRFVHLYGDKALIAERMRERSGHFMPESLLDSQFRDLEAPGAD ESAIPCDVSLPPEALLPRILAELG
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=180, Percent_Identity=42.7777777777778, Blast_Score=137, Evalue=5e-33, Organism=Escherichia coli, GI87082265, Length=166, Percent_Identity=39.1566265060241, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1790719, Length=142, Percent_Identity=45.7746478873239, Blast_Score=134, Evalue=4e-33, Organism=Caenorhabditis elegans, GI25146487, Length=150, Percent_Identity=46.6666666666667, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6320454, Length=158, Percent_Identity=41.1392405063291, Blast_Score=129, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 19944; Mature: 19813
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSRPAPAILSLANVSANMKYGNIVVMGVAGCGKSSVGRLLAEAIGARFIEGDSFHPPE CCCCCCCHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHH NIQRMRAGIPLGDDDRAGWLANLAAQLRQGRDSGEPLVLACSALKRRYRDVLRDGDPGLR HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE FVHLYGDKALIAERMRERSGHFMPESLLDSQFRDLEAPGADESAIPCDVSLPPEALLPRI EEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH LAELG HHHCC >Mature Secondary Structure PSSRPAPAILSLANVSANMKYGNIVVMGVAGCGKSSVGRLLAEAIGARFIEGDSFHPPE CCCCCCHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHH NIQRMRAGIPLGDDDRAGWLANLAAQLRQGRDSGEPLVLACSALKRRYRDVLRDGDPGLR HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE FVHLYGDKALIAERMRERSGHFMPESLLDSQFRDLEAPGADESAIPCDVSLPPEALLPRI EEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH LAELG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]