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The map label for this gene is xerC [C]

Identifier: 34497851

GI number: 34497851

Start: 2579083

End: 2580171

Strand: Reverse

Name: xerC [C]

Synonym: CV_2396

Alternate gene names: 34497851

Gene position: 2580171-2579083 (Counterclockwise)

Preceding gene: 34497852

Following gene: 34497850

Centisome position: 54.31

GC content: 68.5

Gene sequence:

>1089_bases
ATGCTGCCAGATGTTTTCCGCGCCGATACAGGCTCCCGTTCGCTGATACAAGCCCAGTCCGACGCCCAGGCGGTGCTGAC
CTGGCTGGCCGAGCATGCCGATCGTCCCGCCACCTTGGCGGCCTACCGCAAGGAAGCGGAGCGCCTGCTGCTGTGGCTGG
CCCCTCGCCGGCAGACGCTGGCCCAGGTCAAGCGCGAGGATGTGCTGGACTACCGCCGTTTCCTCGCCTCGCCCCATCCG
GCCGAACAGTGGCTGGGGCCGGCGAGGCCGCGCAGCCATCCCGACTGGAAACCGTTCAGCAAGCCGCTGTCTCCCGCCAG
CGTCGAGCACAGCCTGACTGTGCTGGGCGCGCTGTTCGCCTATCTCAACGACGCCGGCTACTTGAACGGCAACCCATTCA
AGCTGCTGCGCCGGCGAGGCGCGAGGAAGTCGGCCCAGGAAATCGAGCGTTTTCTGGACGCCGATTGCTGGCGCCATCTC
CAGGCCACCTTGAACGGCCTGCCGCGCGGCAGCGACAGGGAAATCCGCCACGCCGAACGCGCGCTGTGGCTGTTCACCCT
GCTCTACCTGACCGGCGCGCGCCGAGCCGAAGCCGCCGCCGCGCGCGCCTGCGACCTGGCCCGTCGCAACGGCAACTGGT
GGTGGCATGTGGTCGGCAAGGGCGGCGTGTCGGCGCGCATTCCGCTGTCGGACGAATTGATGGACGCGCTCGCCCGCTAT
CGGTTGAGCCTGGGACTGCCGCCGCAGCCTGCGGCGGATGAGGATACGCCGCTGGTCTGCCGCGTCGGAAGCAAAGGCCA
GGCGAAGCCTCTGTCCGACAAGGCGATCTACCTGGTCTGCAAGGAAGTGTTCGGCCGGGCGCAAGCCGCCGCGCCCAATG
AGGATATCCGCGCCAAGCTGCGCGCGGCCAGCACGCACTGGCTGCGTCACACCGCCGCCAGCCATCAGCTGGAAGCGGGC
GTGCCGCTGCTGCTGGTCAGCCAGAACCTTCGCCACGCCAGCATCCAGACCACCCGCCGCTATCTGCACAGCGAGGAGGA
CGCCCGTCACGAAGCCAGCCGCCTGCACAAGCTGAAGCGCGATTCCTGA

Upstream 100 bases:

>100_bases
CTACGAAATCCTCACCCAGTCCGCGGGCACGCCGGACAAGCCGAGCTTCAAATAATCTTCCAGGCCGTCCGCATCCGCGG
CGGCCTTCTTCCGCTCAGCC

Downstream 100 bases:

>100_bases
GCGTTTCGCCCTTCCCTTTCCGCGCCATTCCGCGTACCATCGCGCCTCTTTTATTTTCAAGGAGATGCTAAGTGACTGAT
CAAACTGCCGCCCGCGCCTG

Product: integrase/recombinase protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase; Integrase/Recombinase Protein; Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family; Site Specific Recombinase Phage Integrase Family; Integrase; Phage Integrase Family Site Specific Recombinase; Phage IntegrasePhage Integrase N-Terminal SAM-Like; Integrase/Recombinase XerD; Tyrosine-Based Site-Specific Recombinase XerD; Integrase / Recombinase Protein; Tyrosine Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase; Integrase Domain-Containing Protein; Site-Specific Tyrosine Integrase/Recombinase; Site-Specific Recombinase XerC; Phage Integrase Family; Tyrosine-Based Site-Specific Recombinase

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLPDVFRADTGSRSLIQAQSDAQAVLTWLAEHADRPATLAAYRKEAERLLLWLAPRRQTLAQVKREDVLDYRRFLASPHP
AEQWLGPARPRSHPDWKPFSKPLSPASVEHSLTVLGALFAYLNDAGYLNGNPFKLLRRRGARKSAQEIERFLDADCWRHL
QATLNGLPRGSDREIRHAERALWLFTLLYLTGARRAEAAAARACDLARRNGNWWWHVVGKGGVSARIPLSDELMDALARY
RLSLGLPPQPAADEDTPLVCRVGSKGQAKPLSDKAIYLVCKEVFGRAQAAAPNEDIRAKLRAASTHWLRHTAASHQLEAG
VPLLLVSQNLRHASIQTTRRYLHSEEDARHEASRLHKLKRDS

Sequences:

>Translated_362_residues
MLPDVFRADTGSRSLIQAQSDAQAVLTWLAEHADRPATLAAYRKEAERLLLWLAPRRQTLAQVKREDVLDYRRFLASPHP
AEQWLGPARPRSHPDWKPFSKPLSPASVEHSLTVLGALFAYLNDAGYLNGNPFKLLRRRGARKSAQEIERFLDADCWRHL
QATLNGLPRGSDREIRHAERALWLFTLLYLTGARRAEAAAARACDLARRNGNWWWHVVGKGGVSARIPLSDELMDALARY
RLSLGLPPQPAADEDTPLVCRVGSKGQAKPLSDKAIYLVCKEVFGRAQAAAPNEDIRAKLRAASTHWLRHTAASHQLEAG
VPLLLVSQNLRHASIQTTRRYLHSEEDARHEASRLHKLKRDS
>Mature_362_residues
MLPDVFRADTGSRSLIQAQSDAQAVLTWLAEHADRPATLAAYRKEAERLLLWLAPRRQTLAQVKREDVLDYRRFLASPHP
AEQWLGPARPRSHPDWKPFSKPLSPASVEHSLTVLGALFAYLNDAGYLNGNPFKLLRRRGARKSAQEIERFLDADCWRHL
QATLNGLPRGSDREIRHAERALWLFTLLYLTGARRAEAAAARACDLARRNGNWWWHVVGKGGVSARIPLSDELMDALARY
RLSLGLPPQPAADEDTPLVCRVGSKGQAKPLSDKAIYLVCKEVFGRAQAAAPNEDIRAKLRAASTHWLRHTAASHQLEAG
VPLLLVSQNLRHASIQTTRRYLHSEEDARHEASRLHKLKRDS

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40706; Mature: 40706

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDVFRADTGSRSLIQAQSDAQAVLTWLAEHADRPATLAAYRKEAERLLLWLAPRRQTL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
AQVKREDVLDYRRFLASPHPAEQWLGPARPRSHPDWKPFSKPLSPASVEHSLTVLGALFA
HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YLNDAGYLNGNPFKLLRRRGARKSAQEIERFLDADCWRHLQATLNGLPRGSDREIRHAER
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALWLFTLLYLTGARRAEAAAARACDLARRNGNWWWHVVGKGGVSARIPLSDELMDALARY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCHHHHHHHHHH
RLSLGLPPQPAADEDTPLVCRVGSKGQAKPLSDKAIYLVCKEVFGRAQAAAPNEDIRAKL
HHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
RAASTHWLRHTAASHQLEAGVPLLLVSQNLRHASIQTTRRYLHSEEDARHEASRLHKLKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
DS
CC
>Mature Secondary Structure
MLPDVFRADTGSRSLIQAQSDAQAVLTWLAEHADRPATLAAYRKEAERLLLWLAPRRQTL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
AQVKREDVLDYRRFLASPHPAEQWLGPARPRSHPDWKPFSKPLSPASVEHSLTVLGALFA
HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YLNDAGYLNGNPFKLLRRRGARKSAQEIERFLDADCWRHLQATLNGLPRGSDREIRHAER
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALWLFTLLYLTGARRAEAAAARACDLARRNGNWWWHVVGKGGVSARIPLSDELMDALARY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCHHHHHHHHHH
RLSLGLPPQPAADEDTPLVCRVGSKGQAKPLSDKAIYLVCKEVFGRAQAAAPNEDIRAKL
HHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
RAASTHWLRHTAASHQLEAGVPLLLVSQNLRHASIQTTRRYLHSEEDARHEASRLHKLKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
DS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA