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The map label for this gene is fliD [H]

Identifier: 34497760

GI number: 34497760

Start: 2494677

End: 2496053

Strand: Reverse

Name: fliD [H]

Synonym: CV_2305

Alternate gene names: 34497760

Gene position: 2496053-2494677 (Counterclockwise)

Preceding gene: 34497763

Following gene: 34497759

Centisome position: 52.54

GC content: 62.75

Gene sequence:

>1377_bases
ATGTCATCCATCAGCGCCAGCGCAGGTCCGTTGGACGTGCAATCCATTGTCAGCCAGCTGATCCAGGCCGACTCCCAGCC
CTTGGCTCAAAGCAGGCAACGCGCTTCGACCTACCAGTCGGAGCTGAGCGTGATTGGCCAGGTCAGCTCGGCGCTGTCCG
CGCTGCAAAGCGCCGCCTCCACCTTGCAGTCCGGCTCCTTTCTGCAGCAGTTCAGCGCCACCTCTTCCGACAGCACGGTG
GCCAGCGTCTCCACCTCCTCAGGCGGCGCGGCCGGCACCTATGTGCTGAACGTCTCGCAGCTGGCCAAGTCGCGCCAGCT
GGTATTCGACCAGAATCCCAACGGCAGCGCGATCACCGATCAGAACGCCGCCATCTCCGGCGCGCCCAGCTCGCTGAGCT
TCAGCGTCGGCGGCGCCAGCTCCACCGTCCAGCTGGGCAGCAACGCGTCGCTGTCGTCGATCGCCAACAGCATCAACGGC
GCCGGCATAGGGGTCAACGCCTCCATCGTGCAGTACAACAACACCTATTCGCTGGTGTTGAGCTCGGCCCAGGCCGGGCC
CGGCAACGCCTTCAGCATCACCGCAGGCGGCACCGACAGCAACAACACCTCGGGCAATACCCTGGCCGGCCTACAGCAAA
GCGCCACCGCGGCCAGCGAATCGGCCAACGCCCAGAGCGCGCTGATGACGGTGAACGGCGTCAACGTCTCGTCAGACAGC
AACAGCGTGACCAGCGTCGTCAACGGCGCCACCATCAATCTGGAAAAGACCGGCCAGGTCACCATCAATATGGCGCAGAG
CACCACCAACATCACCAATACGCTGCAAACCTTCATCAATGCCTACAACCAGGTGATCACCACCACCGCATCGGCGACGC
AAAGCCATACCACGGTGGGCAGCACCCCGACCAATACCGACATCAGCGGCGATCTCACCTCGCTGCAGGAGCATATGGCC
TCCATCCTCGGCACCCCGGTCAAGGGCGTGGACGCCACCAGCTCCTATGCCTACCTGGCCCAGGTAGGGATCACGCAGAA
GGCGGACGGCACGCTGACGCTGGATTCCAGCGCCTTCAACGCGGCCCTGACCGCCAACCCTTCCGCGGTGGCTAATCTGT
TCGGCAATAGCCAGAACACCGGCGTCGCCAATGTGTTCAACACCACCATCAATTCGCTGCTGGGGCCTAACGGGCTGATC
ACCTCGAACCAGACCAATCTGAACAGCAAGGTCACGGCCGAGCAGCAACTGCAGGAACGGCTGCAGAACCAGCTGAACAA
CGAGCAGACCAGCCTGCTGACCGAATACTCCAACCTCAACAGCGAGCTGGCGCAAATGCAGCAAGCCTCCAGCAGCATGG
CCAATCTGATTGCCTGA

Upstream 100 bases:

>100_bases
ATTGCGGCGACAGACCGCATCCGTGATGACAAACAGACAATAGCCCTAATAGCAACACGCCCGCTTGATGGCAGATCAGG
CGGCACCGGGAGACGACGTC

Downstream 100 bases:

>100_bases
TCCTTGCCAGGCATCTTGCAGGCGGCATCCGCGCTGGAGGCCGCCTTTTCTTTTGGCGTATACTCCCGCTGACCGCGCCG
CGCCCGCCGGCCCGCGGAAC

Product: flagellar protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSSISASAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDSTV
ASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAITDQNAAISGAPSSLSFSVGGASSTVQLGSNASLSSIANSING
AGIGVNASIVQYNNTYSLVLSSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDS
NSVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVGSTPTNTDISGDLTSLQEHMA
SILGTPVKGVDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLFGNSQNTGVANVFNTTINSLLGPNGLI
TSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA

Sequences:

>Translated_458_residues
MSSISASAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDSTV
ASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAITDQNAAISGAPSSLSFSVGGASSTVQLGSNASLSSIANSING
AGIGVNASIVQYNNTYSLVLSSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDS
NSVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVGSTPTNTDISGDLTSLQEHMA
SILGTPVKGVDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLFGNSQNTGVANVFNTTINSLLGPNGLI
TSNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA
>Mature_457_residues
SSISASAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAASTLQSGSFLQQFSATSSDSTVA
SVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAITDQNAAISGAPSSLSFSVGGASSTVQLGSNASLSSIANSINGA
GIGVNASIVQYNNTYSLVLSSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDSN
SVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVGSTPTNTDISGDLTSLQEHMAS
ILGTPVKGVDATSSYAYLAQVGITQKADGTLTLDSSAFNAALTANPSAVANLFGNSQNTGVANVFNTTINSLLGPNGLIT
SNQTNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=417, Percent_Identity=30.6954436450839, Blast_Score=115, Evalue=5e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 46365; Mature: 46234

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSISASAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAAS
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLQSGSFLQQFSATSSDSTVASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAITD
HHHCCHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHCCCEEEECCCCCCEECC
QNAAISGAPSSLSFSVGGASSTVQLGSNASLSSIANSINGAGIGVNASIVQYNNTYSLVL
CCCEECCCCCCEEEEECCCCCEEEECCCCCHHHHHHHCCCCCCCCCEEEEEECCEEEEEE
SSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDS
ECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCC
NSVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVG
CCHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
STPTNTDISGDLTSLQEHMASILGTPVKGVDATSSYAYLAQVGITQKADGTLTLDSSAFN
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCC
AALTANPSAVANLFGNSQNTGVANVFNTTINSLLGPNGLITSNQTNLNSKVTAEQQLQER
EEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHH
LQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSISASAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAAS
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLQSGSFLQQFSATSSDSTVASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAITD
HHHCCHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHCCCEEEECCCCCCEECC
QNAAISGAPSSLSFSVGGASSTVQLGSNASLSSIANSINGAGIGVNASIVQYNNTYSLVL
CCCEECCCCCCEEEEECCCCCEEEECCCCCHHHHHHHCCCCCCCCCEEEEEECCEEEEEE
SSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGVNVSSDS
ECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCC
NSVTSVVNGATINLEKTGQVTINMAQSTTNITNTLQTFINAYNQVITTTASATQSHTTVG
CCHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
STPTNTDISGDLTSLQEHMASILGTPVKGVDATSSYAYLAQVGITQKADGTLTLDSSAFN
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCC
AALTANPSAVANLFGNSQNTGVANVFNTTINSLLGPNGLITSNQTNLNSKVTAEQQLQER
EEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHH
LQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]