Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497720

Identifier: 34497720

GI number: 34497720

Start: 2453995

End: 2455713

Strand: Direct

Name: 34497720

Synonym: CV_2265

Alternate gene names: NA

Gene position: 2453995-2455713 (Clockwise)

Preceding gene: 34497719

Following gene: 34497721

Centisome position: 51.65

GC content: 65.62

Gene sequence:

>1719_bases
ATGGCGTGTGCAAACCTGGATGCGGCCCGTTGCCTGCGGCGCGGCGCCGTCGGTGAGAGGATGCCAGGGTGCATCCAAGG
CGGATTCGGATCGGTCTTATATCGGCATGCCTCCATTTTTCGGCATCCCAATGTCCTTTATCTTGCCGGTTTGAAAACTG
TGGGCAAGCTCTCGCGCCGCGCCAGGCCGCGCGGCTTGCCGCGACCTTTCCATCGCCGAGGATCGCTTATGCCGTTGTTG
GATGCCAGGCTGGGTTGGAGTTGCGCGCGCCTGATCGCGCGCGGTTTGTTCATCTTGCAGCTTGGGGGCTGGCCGGCGAT
CGGCATCGCCGCCGGGCGGCCTGCCGAATGCGTGCCGGGCGAAGGCAAGAGTCCGCCATGGCTGGCCTCCCTCGACATCC
AGGGGCGGAACGCTTTGACGAGCGCGCAATGGTACCGGGACTGGCTGGCTGTGACGGCTGATCTGTGCACCGATGTCCGC
CATGCGGACCGCGACAATCCGGGCGTGAAAATCGTCTGGCGCGGATCCGGCGATGCGGACAAGAAGCTGTTGTTTTATGG
CGCGGGCAACCATCATTACGAACCGGCAGCGGTATTTGACGAGGGGTTGCAGGTGATCAAGGCCGATGGCAGCCTGAAAA
TCCGCCCCGGAACCGGGCAGTCCACAGCCAGCGCGCTCAAGAGTTCGTCGTTCTCATATGCTCTGGCCGAACGATTCGCG
CTGGTCAGCCACGATGAGCGGCATTATGTCTACGCGATCAACGCGCCCGGCGGCATCGCGGTGGACGAGTCGCTGGGAAG
CGAGGGGACCGGCAATGAGGAGGAAATCGCCTTTCCCGGCGGGGTGCAGTCCCGCTTCGTCAAAGGGATGTTCGAAAACC
GACTGGTTTATGGCGAGCCGGGGCGAACGCCCTACGTGGAAACCTTGGCGTACACGCCGAATCCGCGCTACGGGCAAGGC
GCCAAAGGCGCGGGAGACGGCGAGGTGGATGTGCTGGTTTCTTCCCGGGAGGCGGTGGATGTTTTGGGCGGTGGCCGGGC
CGTGGATGCCTCCACCTGGCGTTTCCCGGCCACGGATGGCCGCGGCGCGGCGACCCAGGCGCAGTTGAGCACGCATGACG
GCTCCGCCGCGCTGTGGGCGACGACCGGGCACCGGCAGCCGAGGTTCCCGCCAGAGGCGGGGTACCGCTGCGCGCTGGTG
GACACCGCCCTGGAGCGGAACCATGCGCTGGCGGTGACCCGGACGCCGGTTCTGGAAGTGGCTACGCCAAGACGGCGCGC
GGGCACTTGCGTCTATTTGTCCGATCGGGATGTGGCCGTGCGCGACGCCGGGGCGGAGGCCACCCGCGGTGCGGATCATT
ACTGGACGCGATTGAGCGTGCACTGGAACAGTCCGGCGGACCTGGCCCGGGTGCGGGGATACCGGATTTACTGGACGGAC
ATCTACGGCAATCCCGTCCAGATCGTGGGCGACATTCTCGATCCCAACGCCACCCGCTACGCGGTTTCGGAGAACATGGG
CCGCAAGCTGGGGCTGAGGGACCACGTGGATGGGCTGATTCCCGTGTATCTGGACATTTACACCGTCATGGAAGGCGCGC
CGGAAGCGGAGTCGTTCTCGCCGGTCCAGGTAAAGGTCAATGTGGCGCCGGCTCGGTTCAACCCCATCCGCCGGATTGCC
GGCGCGTCTTCGCCGGCGGCTGGGAGCCGCGGGCAATGA

Upstream 100 bases:

>100_bases
CAGTGCCCGGACGCTGCTGATCCACGGAGTAGCGGATCATGACGTGCTCTTCATGGAGTACGCCAGATAAGGCCTGTGAC
TGGGCCTTTCTCCAGCGGGC

Downstream 100 bases:

>100_bases
AACACAGCGCATTGGCCTGGGCGGTTCCCATTTTGATCGGCGCGATGGCCGCGTGAGTTGCCACGACGGCGTCCAGACAG
CTGCCGGTCATGGCTTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRRARPRGLPRPFHRRGSLMPLL
DARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPGEGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVR
HADRDNPGVKIVWRGSGDADKKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA
LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEPGRTPYVETLAYTPNPRYGQG
AKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDGRGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALV
DTALERNHALAVTRTPVLEVATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD
IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFSPVQVKVNVAPARFNPIRRIA
GASSPAAGSRGQ

Sequences:

>Translated_572_residues
MACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRRARPRGLPRPFHRRGSLMPLL
DARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPGEGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVR
HADRDNPGVKIVWRGSGDADKKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA
LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEPGRTPYVETLAYTPNPRYGQG
AKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDGRGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALV
DTALERNHALAVTRTPVLEVATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD
IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFSPVQVKVNVAPARFNPIRRIA
GASSPAAGSRGQ
>Mature_571_residues
ACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRRARPRGLPRPFHRRGSLMPLLD
ARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPGEGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVRH
ADRDNPGVKIVWRGSGDADKKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFAL
VSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEPGRTPYVETLAYTPNPRYGQGA
KGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDGRGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALVD
TALERNHALAVTRTPVLEVATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTDI
YGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFSPVQVKVNVAPARFNPIRRIAG
ASSPAAGSRGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61735; Mature: 61604

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRR
CCCCCCHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH
ARPRGLPRPFHRRGSLMPLLDARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPG
CCCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCC
EGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVRHADRDNPGVKIVWRGSGDAD
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
KKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA
CEEEEEECCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHH
LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEP
HCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCEEECCC
GRTPYVETLAYTPNPRYGQGAKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDG
CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEECCCCEECCCCCC
RGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALVDTALERNHALAVTRTPVLEV
CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEECCCEEEE
ATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD
CCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCEEEEEEE
IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFS
CCCCHHHEEEECCCCCCCEEEHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCC
PVQVKVNVAPARFNPIRRIAGASSPAAGSRGQ
CEEEEEEECCCCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRR
CCCCCHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH
ARPRGLPRPFHRRGSLMPLLDARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPG
CCCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCC
EGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVRHADRDNPGVKIVWRGSGDAD
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
KKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA
CEEEEEECCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHH
LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEP
HCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCEEECCC
GRTPYVETLAYTPNPRYGQGAKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDG
CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEECCCCEECCCCCC
RGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALVDTALERNHALAVTRTPVLEV
CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEECCCEEEE
ATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD
CCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCEEEEEEE
IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFS
CCCCHHHEEEECCCCCCCEEEHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCC
PVQVKVNVAPARFNPIRRIAGASSPAAGSRGQ
CEEEEEEECCCCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA