| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497705
Identifier: 34497705
GI number: 34497705
Start: 2438029
End: 2439123
Strand: Reverse
Name: 34497705
Synonym: CV_2250
Alternate gene names: NA
Gene position: 2439123-2438029 (Counterclockwise)
Preceding gene: 34497708
Following gene: 34497700
Centisome position: 51.34
GC content: 69.32
Gene sequence:
>1095_bases GTGAAACGTTACCTGATCCTGCTCCACCGCTATCTAGGCCTTGGCGCCGCCCTCTTTCTTCTGCTGATCGGCATCAGCGG CAGCCTGCTGGTTTTCCGCCCCGAAATGGAAACCCTGGCCGGCATCCGTCCCGCCGCCTCCAGCCACCCCGCCCGCTATC AGGCACTTGCCGATGCCGTGCTGGCGCGCTACCCGAACGCAGGATTCAGCTTGCGCTTCGACAAACCCGGCGAAGCCGTG CAGGCGCGGCTGCGCCAGCCGGGCAACGAGCGCCGGCTGTGGCTGGACCCGGCCACCGCCCGCATCGCCGACGATAGGCC GAATGGGGACGCATGGTTCGATTGGCTGCTGGATCTGCATGAAAAACTGCTGATGGGAGACGCCGGGGAAACGCTGGCCG GCGTCTGCGGCCTGCTGTTGATCGCGCTGGCCGCCTCCGGCCTGGTTTACTGGTGGCCGAAGGACTGGAGGCGCGCCGGA CAGGTGCGCCGGGACAAGGGCTTCCGCATCCTGGCGGCGGACCTGCACCGGCTGAGCGGCGCGCTGGCCAGCCTGCTGCT GCTATCCGCGGGACTGACCGGCGCCTACCAGGCCTTCAACCGGCCCATCAATGATGCGATCAATCGCTTATTCGGCTACC AGCAGCCCGCCAAGATCCGTTTCCATGCGCCGCCCGGCGCAGAACGGCTGCCATTGGACGCGCTGATCGCTCGGGCGGGC GCCGCGCTGCCCGGCGCCCGCCTGGTGGACATCCGCTACGAAAGCAAACCCGGCAGTCCCCTGCTGCTGCGGTGGAAACT GCCGGGAGAGCTGCATCCCAACGGCCGCAGCCAGGTGGAGGTGGACCCGTACAGCGGCGCGCTGCTGCGCGTCACGCCGG TGGACCAGGCGGCCCCCGCCATCCGGCTGACCAGCTGGGTATACGGACTGCACACCGGCAGCCTGGGCGGCGGCGCGCTG AGAGCGCTGCTCGCGCTGGCCGGCATCGCGTTGGCCTGGCTGGCCGGCAGCGGCGTCTATCAATGGGCGGCCCGCCAGCG CAAACAGAAACGCTCCAGCCGCGCCACGGCTGCCGCAGTCGGCCGGACAAGATAG
Upstream 100 bases:
>100_bases CGAAACGCATTTGATAATGATGATAATTATCATTAGTATTAAGCATTGTTGCAATGCATTTACACATCGGCCCTCCCGGC CCAACCCGCTGGACACCCCT
Downstream 100 bases:
>100_bases CGTCGCCGCGCGGTCAAATGGAGGGGGTGTGGATATCGTCCGGATTCAGCAGCCGGTGCTTGAGTCCAAGCTGCATCAAG GAAAGCAGGTACTCCTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKRYLILLHRYLGLGAALFLLLIGISGSLLVFRPEMETLAGIRPAASSHPARYQALADAVLARYPNAGFSLRFDKPGEAV QARLRQPGNERRLWLDPATARIADDRPNGDAWFDWLLDLHEKLLMGDAGETLAGVCGLLLIALAASGLVYWWPKDWRRAG QVRRDKGFRILAADLHRLSGALASLLLLSAGLTGAYQAFNRPINDAINRLFGYQQPAKIRFHAPPGAERLPLDALIARAG AALPGARLVDIRYESKPGSPLLLRWKLPGELHPNGRSQVEVDPYSGALLRVTPVDQAAPAIRLTSWVYGLHTGSLGGGAL RALLALAGIALAWLAGSGVYQWAARQRKQKRSSRATAAAVGRTR
Sequences:
>Translated_364_residues MKRYLILLHRYLGLGAALFLLLIGISGSLLVFRPEMETLAGIRPAASSHPARYQALADAVLARYPNAGFSLRFDKPGEAV QARLRQPGNERRLWLDPATARIADDRPNGDAWFDWLLDLHEKLLMGDAGETLAGVCGLLLIALAASGLVYWWPKDWRRAG QVRRDKGFRILAADLHRLSGALASLLLLSAGLTGAYQAFNRPINDAINRLFGYQQPAKIRFHAPPGAERLPLDALIARAG AALPGARLVDIRYESKPGSPLLLRWKLPGELHPNGRSQVEVDPYSGALLRVTPVDQAAPAIRLTSWVYGLHTGSLGGGAL RALLALAGIALAWLAGSGVYQWAARQRKQKRSSRATAAAVGRTR >Mature_364_residues MKRYLILLHRYLGLGAALFLLLIGISGSLLVFRPEMETLAGIRPAASSHPARYQALADAVLARYPNAGFSLRFDKPGEAV QARLRQPGNERRLWLDPATARIADDRPNGDAWFDWLLDLHEKLLMGDAGETLAGVCGLLLIALAASGLVYWWPKDWRRAG QVRRDKGFRILAADLHRLSGALASLLLLSAGLTGAYQAFNRPINDAINRLFGYQQPAKIRFHAPPGAERLPLDALIARAG AALPGARLVDIRYESKPGSPLLLRWKLPGELHPNGRSQVEVDPYSGALLRVTPVDQAAPAIRLTSWVYGLHTGSLGGGAL RALLALAGIALAWLAGSGVYQWAARQRKQKRSSRATAAAVGRTR
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39582; Mature: 39582
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLILLHRYLGLGAALFLLLIGISGSLLVFRPEMETLAGIRPAASSHPARYQALADAV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHH LARYPNAGFSLRFDKPGEAVQARLRQPGNERRLWLDPATARIADDRPNGDAWFDWLLDLH HHHCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEECCCHHEECCCCCCCHHHHHHHHHHH EKLLMGDAGETLAGVCGLLLIALAASGLVYWWPKDWRRAGQVRRDKGFRILAADLHRLSG HHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHCCHHHCCCCEEHHHHHHHHHH ALASLLLLSAGLTGAYQAFNRPINDAINRLFGYQQPAKIRFHAPPGAERLPLDALIARAG HHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHC AALPGARLVDIRYESKPGSPLLLRWKLPGELHPNGRSQVEVDPYSGALLRVTPVDQAAPA CCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCH IRLTSWVYGLHTGSLGGGALRALLALAGIALAWLAGSGVYQWAARQRKQKRSSRATAAAV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GRTR CCCC >Mature Secondary Structure MKRYLILLHRYLGLGAALFLLLIGISGSLLVFRPEMETLAGIRPAASSHPARYQALADAV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHH LARYPNAGFSLRFDKPGEAVQARLRQPGNERRLWLDPATARIADDRPNGDAWFDWLLDLH HHHCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEECCCHHEECCCCCCCHHHHHHHHHHH EKLLMGDAGETLAGVCGLLLIALAASGLVYWWPKDWRRAGQVRRDKGFRILAADLHRLSG HHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHCCHHHCCCCEEHHHHHHHHHH ALASLLLLSAGLTGAYQAFNRPINDAINRLFGYQQPAKIRFHAPPGAERLPLDALIARAG HHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHC AALPGARLVDIRYESKPGSPLLLRWKLPGELHPNGRSQVEVDPYSGALLRVTPVDQAAPA CCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCH IRLTSWVYGLHTGSLGGGALRALLALAGIALAWLAGSGVYQWAARQRKQKRSSRATAAAV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GRTR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA