| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is lpxA [H]
Identifier: 34497663
GI number: 34497663
Start: 2379038
End: 2379814
Strand: Direct
Name: lpxA [H]
Synonym: CV_2208
Alternate gene names: 34497663
Gene position: 2379038-2379814 (Clockwise)
Preceding gene: 34497662
Following gene: 34497664
Centisome position: 50.07
GC content: 64.22
Gene sequence:
>777_bases ATGGCCATTCATCCGACCGCAATCGTAGATCCCAAGGCGCAGATCGCCGACGACGTCGAAATCGGCGCCTATTCCATCAT CGGCCCCAACGTCAGCATCGGCGCCGGCAGCTGGATAGGCCCGCACGTGGTGATCGAAGGCCATACCGCCATCGGCAAGA ACAATCGCGTGTTCCAGTTCTGTTCGCTGGGCGCCATCCCGCAGGACTTGAAATACGCCGGCGAGCCGACCCGGCTGGAG ATAGGCGACAACAACACCATCCGCGAGTTCTGCACCTTCAATACCGGCACGGTGCAGGATGGCGGCGTCACCCGCGTCGG CAGCGACAACTGGATCATGGCCTATGTGCACATCGCGCACGACTGCCAGGTGGGCAACCACATCATCCTGGCCAATAACG CCACCCTGGCCGGCCATGTCCACCTCGGTGACTGGGTGTTCCTGGGCGGCTTCACCAGCGTGCACCAGTTCGTCATCGTC GGCGAGCACGCGATGACCGCCTTCGCCAGCGCGGTGGCGCAGGACATTCCGGCGTATGTGACGGCGCACGGCAACCGCGC GGTGCCGTCCGGCATCAATGCGGAAGGCATGAAGCGCCGCGGTTTCACGCCCGAGCAGATCCGCCGCGTCCGCAACGCCT ACAAGACCTTGTATCGCCAGGGCTTGAGCTACGACGAGGCCAAGGCCGCCATTCTGGCCGAAGCGGGCGAAGGCCATGCC GAGCTGGAGCCGTTCGTGCGCTTCTTCGGACAATCGGCGCGAGGCATCATCCGCTGA
Upstream 100 bases:
>100_bases CCGTCAAGCGCGGCATCGGCAAGTACGCCGCGCGCGCGCTGGTGGACGGCCAGGTGGCTTGCGAAGCCGAGATCATGTGC GCGCGCCGCGAGGTGTGAAC
Downstream 100 bases:
>100_bases GCTTATGAGCGACCAACTGTTCAAGCGCAAGGGGGCCTTGAAGGTTGCCATGGTGGCCGGGGAGGCTTCCGGCGACCTGC TGGCCGCCCACCTGATGGAT
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAIHPTAIVDPKAQIADDVEIGAYSIIGPNVSIGAGSWIGPHVVIEGHTAIGKNNRVFQFCSLGAIPQDLKYAGEPTRLE IGDNNTIREFCTFNTGTVQDGGVTRVGSDNWIMAYVHIAHDCQVGNHIILANNATLAGHVHLGDWVFLGGFTSVHQFVIV GEHAMTAFASAVAQDIPAYVTAHGNRAVPSGINAEGMKRRGFTPEQIRRVRNAYKTLYRQGLSYDEAKAAILAEAGEGHA ELEPFVRFFGQSARGIIR
Sequences:
>Translated_258_residues MAIHPTAIVDPKAQIADDVEIGAYSIIGPNVSIGAGSWIGPHVVIEGHTAIGKNNRVFQFCSLGAIPQDLKYAGEPTRLE IGDNNTIREFCTFNTGTVQDGGVTRVGSDNWIMAYVHIAHDCQVGNHIILANNATLAGHVHLGDWVFLGGFTSVHQFVIV GEHAMTAFASAVAQDIPAYVTAHGNRAVPSGINAEGMKRRGFTPEQIRRVRNAYKTLYRQGLSYDEAKAAILAEAGEGHA ELEPFVRFFGQSARGIIR >Mature_257_residues AIHPTAIVDPKAQIADDVEIGAYSIIGPNVSIGAGSWIGPHVVIEGHTAIGKNNRVFQFCSLGAIPQDLKYAGEPTRLEI GDNNTIREFCTFNTGTVQDGGVTRVGSDNWIMAYVHIAHDCQVGNHIILANNATLAGHVHLGDWVFLGGFTSVHQFVIVG EHAMTAFASAVAQDIPAYVTAHGNRAVPSGINAEGMKRRGFTPEQIRRVRNAYKTLYRQGLSYDEAKAAILAEAGEGHAE LEPFVRFFGQSARGIIR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=256, Percent_Identity=56.25, Blast_Score=299, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 27788; Mature: 27657
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHPTAIVDPKAQIADDVEIGAYSIIGPNVSIGAGSWIGPHVVIEGHTAIGKNNRVFQF CCCCCCEEECCCHHHCCCCCCCEEEEECCCEEECCCCCCCCEEEEECCEEECCCCCEEEE CSLGAIPQDLKYAGEPTRLEIGDNNTIREFCTFNTGTVQDGGVTRVGSDNWIMAYVHIAH ECCCCCCHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCEEEEEEEEEE DCQVGNHIILANNATLAGHVHLGDWVFLGGFTSVHQFVIVGEHAMTAFASAVAQDIPAYV CCCCCCEEEEECCCEEEEEEEECCEEEECCHHHHEEEEEECHHHHHHHHHHHHHHCCEEE TAHGNRAVPSGINAEGMKRRGFTPEQIRRVRNAYKTLYRQGLSYDEAKAAILAEAGEGHA EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCC ELEPFVRFFGQSARGIIR HHHHHHHHHCCCCCCCCC >Mature Secondary Structure AIHPTAIVDPKAQIADDVEIGAYSIIGPNVSIGAGSWIGPHVVIEGHTAIGKNNRVFQF CCCCCEEECCCHHHCCCCCCCEEEEECCCEEECCCCCCCCEEEEECCEEECCCCCEEEE CSLGAIPQDLKYAGEPTRLEIGDNNTIREFCTFNTGTVQDGGVTRVGSDNWIMAYVHIAH ECCCCCCHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCEEEEEEEEEE DCQVGNHIILANNATLAGHVHLGDWVFLGGFTSVHQFVIVGEHAMTAFASAVAQDIPAYV CCCCCCEEEEECCCEEEEEEEECCEEEECCHHHHEEEEEECHHHHHHHHHHHHHHCCEEE TAHGNRAVPSGINAEGMKRRGFTPEQIRRVRNAYKTLYRQGLSYDEAKAAILAEAGEGHA EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCC ELEPFVRFFGQSARGIIR HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA