| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fabZ
Identifier: 34497662
GI number: 34497662
Start: 2378583
End: 2379035
Strand: Direct
Name: fabZ
Synonym: CV_2207
Alternate gene names: 34497662
Gene position: 2378583-2379035 (Clockwise)
Preceding gene: 34497661
Following gene: 34497663
Centisome position: 50.06
GC content: 63.13
Gene sequence:
>453_bases ATGAGTGAACACGCTGTCTCGATCGATGTCCGCGAGATCATGCGCTGCCTGCCGCATCGTTACCCGTTCCTGCTGGTTGA CCGCGTCACCGAAATGGAGCCCAACGTGCGCATCAAGGCGCTGAAGAACGTCACCATCAACGAGCCGTTCTTCGTCGGCC ACTTCGAACAATATCCGGTGATGCCGGGCGTGCTGATCATCGAGGCGCTGGCCCAGGCCGCCGGCATCCTGGCGATCAAG AGCCAGGGCGAACGCTTGGAGAACGAGCTGTACTTCTTCGTCGGCATCGACAACGCCCGCTTCAAGCGCCAGGTGGTGCC GGGCGACCAACTGGTGTTCGAAGTGACGCAGATGACCGTCAAGCGCGGCATCGGCAAGTACGCCGCGCGCGCGCTGGTGG ACGGCCAGGTGGCTTGCGAAGCCGAGATCATGTGCGCGCGCCGCGAGGTGTGA
Upstream 100 bases:
>100_bases TCCAACGCCGTCCACGTGCGTCATCTGGACGATTTCGCCAAGCGCGTGAAGCAGCTTGAGCGGGAACTGGAAACACTGAA AAAATCGAAGGAAGAACCTC
Downstream 100 bases:
>100_bases ACATGGCCATTCATCCGACCGCAATCGTAGATCCCAAGGCGCAGATCGCCGACGACGTCGAAATCGGCGCCTATTCCATC ATCGGCCCCAACGTCAGCAT
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: but-2-enoyl-[acyl-carrier protein]; H2O
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSEHAVSIDVREIMRCLPHRYPFLLVDRVTEMEPNVRIKALKNVTINEPFFVGHFEQYPVMPGVLIIEALAQAAGILAIK SQGERLENELYFFVGIDNARFKRQVVPGDQLVFEVTQMTVKRGIGKYAARALVDGQVACEAEIMCARREV
Sequences:
>Translated_150_residues MSEHAVSIDVREIMRCLPHRYPFLLVDRVTEMEPNVRIKALKNVTINEPFFVGHFEQYPVMPGVLIIEALAQAAGILAIK SQGERLENELYFFVGIDNARFKRQVVPGDQLVFEVTQMTVKRGIGKYAARALVDGQVACEAEIMCARREV >Mature_149_residues SEHAVSIDVREIMRCLPHRYPFLLVDRVTEMEPNVRIKALKNVTINEPFFVGHFEQYPVMPGVLIIEALAQAAGILAIKS QGERLENELYFFVGIDNARFKRQVVPGDQLVFEVTQMTVKRGIGKYAARALVDGQVACEAEIMCARREV
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=147, Percent_Identity=55.7823129251701, Blast_Score=177, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_CHRVO (Q7NVY3)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901877.1 - ProteinModelPortal: Q7NVY3 - SMR: Q7NVY3 - GeneID: 2549205 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_2207 - NMPDR: fig|243365.1.peg.2207 - HOGENOM: HBG433282 - OMA: KERRGVA - PhylomeDB: Q7NVY3 - ProtClustDB: PRK00006 - BioCyc: CVIO243365:CV_2207-MONOMER - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084 - TIGRFAMs: TIGR01750
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.58
Molecular weight: Translated: 16978; Mature: 16847
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: ACT_SITE 54-54
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHAVSIDVREIMRCLPHRYPFLLVDRVTEMEPNVRIKALKNVTINEPFFVGHFEQYPV CCCCEEEECHHHHHHHCCCCCCEEEEEHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCC MPGVLIIEALAQAAGILAIKSQGERLENELYFFVGIDNARFKRQVVPGDQLVFEVTQMTV CCHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEEECCCCHHHEECCCCHHHHHHHHHHHH KRGIGKYAARALVDGQVACEAEIMCARREV HHHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure SEHAVSIDVREIMRCLPHRYPFLLVDRVTEMEPNVRIKALKNVTINEPFFVGHFEQYPV CCCEEEECHHHHHHHCCCCCCEEEEEHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCC MPGVLIIEALAQAAGILAIKSQGERLENELYFFVGIDNARFKRQVVPGDQLVFEVTQMTV CCHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEEECCCCHHHEECCCCHHHHHHHHHHHH KRGIGKYAARALVDGQVACEAEIMCARREV HHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (3R)-3-hydroxybutanoyl-[acyl-carrier protein]
Specific reaction: (3R)-3-hydroxybutanoyl-[acyl-carrier protein] = but-2-enoyl-[acyl-carrier protein] + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782