| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is apaG
Identifier: 34497638
GI number: 34497638
Start: 2355427
End: 2355807
Strand: Direct
Name: apaG
Synonym: CV_2183
Alternate gene names: 34497638
Gene position: 2355427-2355807 (Clockwise)
Preceding gene: 34497633
Following gene: 34497639
Centisome position: 49.58
GC content: 65.35
Gene sequence:
>381_bases ATGGCCGATAAACTCTACCAGATGGAGGTGCAGGCGGAGCCACAATACGTGGCCGAACAGTCCAGCGTCGCCAACGACGT CTACGTGTTCGCCTACCGCGTCCGCATCACCAATACCGGCAGCGAGCCGGCGCAGCTGATCAGCCGCCACTGGATCATCA CCGACGCCAATCAGCAGGTGCAGGAGGTGCGCGGCATGGGCGTGGTGGGCGAGCAGCCGCATCTCGACCCGGGCCAGGTG TTCGAGTACTCCAGCGCGGCCCACATCACCACGCCGTACGGCAGCATGAAGGGCGCCTACCAGATGATGGCGGACGACGG TCGGCGCTTCGAGGCGTCCATTCCCGAGATGACGCTGGTGGCGCCCCGGGTGCTGCACTAA
Upstream 100 bases:
>100_bases TGCTCTGACATCGATAAACGAGGAATGCCCGGCATTCTACCGCGCCAAAAGCGGTTTGGCCGGATAAAATGAAAACCAAG ATCAATCAGGAGAAGCCGCA
Downstream 100 bases:
>100_bases TCGCTGTTACAGGAAGGGTCCTTGTCGTCGCGCGGCCAGGTCCACCAGACGATGAAGGTGGCGAGCCCGCCGGCTCCCAG CGCTTCCAGCAATAGAATCC
Product: ApaG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQVQEVRGMGVVGEQPHLDPGQV FEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLVAPRVLH
Sequences:
>Translated_126_residues MADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQVQEVRGMGVVGEQPHLDPGQV FEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLVAPRVLH >Mature_125_residues ADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQVQEVRGMGVVGEQPHLDPGQVF EYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLVAPRVLH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain
Homologues:
Organism=Homo sapiens, GI15812186, Length=121, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI15812188, Length=121, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI7661672, Length=114, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786235, Length=117, Percent_Identity=44.4444444444444, Blast_Score=110, Evalue=3e-26, Organism=Drosophila melanogaster, GI21356905, Length=107, Percent_Identity=36.4485981308411, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24644238, Length=107, Percent_Identity=36.4485981308411, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAG_CHRVO (Q7NW07)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901853.1 - ProteinModelPortal: Q7NW07 - SMR: Q7NW07 - GeneID: 2549392 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_2183 - NMPDR: fig|243365.1.peg.2183 - HOGENOM: HBG746214 - OMA: SRHWVIT - PhylomeDB: Q7NW07 - ProtClustDB: PRK05461 - BioCyc: CVIO243365:CV_2183-MONOMER - HAMAP: MF_00791 - InterPro: IPR007474 - InterPro: IPR023065 - Gene3D: G3DSA:2.60.40.1470
Pfam domain/function: PF04379 DUF525; SSF110069 ApaG
EC number: NA
Molecular weight: Translated: 14106; Mature: 13975
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQV CCCCEEEEEECCCCHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHCEEEECCHHHH QEVRGMGVVGEQPHLDPGQVFEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLV HHHHCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHCCCCCEEECCCCCEEEC APRVLH CCCCCC >Mature Secondary Structure ADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQV CCCEEEEEECCCCHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHCEEEECCHHHH QEVRGMGVVGEQPHLDPGQVFEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLV HHHHCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHCCCCCEEECCCCCEEEC APRVLH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782