| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is crt [H]
Identifier: 34497538
GI number: 34497538
Start: 2268809
End: 2269627
Strand: Reverse
Name: crt [H]
Synonym: CV_2083
Alternate gene names: 34497538
Gene position: 2269627-2268809 (Counterclockwise)
Preceding gene: 34497539
Following gene: 34497537
Centisome position: 47.77
GC content: 66.42
Gene sequence:
>819_bases TTGCCGGTTCAAAACAGAATTCATAAAGGCATAAATATGAATAGCTACGCCCACCTGAACGTGGAAAAACGCGGCCACAC CGCCGTGGTGACCATAGACAACCCGCCGGCCAACACCTGGAACCGCGCCAGCCTCACCGCGCTGAAGCAGTTGGTGGCCG ACCTCAACGCCGACCGCGACATCTACGCGCTGGTGATCACCGGCCAGGGCGAGAAATTCTTCTCCGCCGGCGCCGACCTG AACCTGTTCGCCGATGGAGACAAGAAAGTCGCCACCGAGATGACCCTGCTGTTCGGCGAAGCCTTCGAGGCGCTGTCGGC TTTTCGCGGCGTCAGCATCGCCGCGATCAACGGCTACGCCATGGGCGGCGGCCTGGAGTGCGCGCTGGCCTGCGACATCC GCATCGCCGAGGAGCAGGCGCAGATGGCGCTGCCGGAAGCCGGCGTCGGCCTGCTGCCCTGCGCCGGCGGCACCCAGAAC CTGCCGTGGCTGGTCGGCGAAGGCTGGGCCAAGCGCATGATCCTGTGCGGCGAACGCGTCAACGCCGCCACCGCCGAACG CATCGGCCTGGTGGAACAGGTGGTGGCCAAGGGCGAGGCGCTGGCCGCTGCGCTCAAGCTGGCCGAAGGCGTGGCCAGGC AGTCGCCGTCGTCGGTCGGCGTGTGCAAGCAGCTGGTGCAGGCCGCCCGCACCCAGCCGCCGGCCTGGAACCTGATCAAG GAACGCGAAGCCTTCATCAAGCTGTTCGACACCCAGGACCAGGCCGAAGGCACCCGCGCCTTCCTGGAAAAGCGCGCGCC GAACTGGAAGAACGCCTGA
Upstream 100 bases:
>100_bases GCAAAATCCCTGATGCTGCGTTGCGCCGGCTGGCCGTACTCATATGTACTGTCTGCGCCGGCGCGCCTTGCCTCAGCCGC TGCGCTGGATTTTTCCAGCC
Downstream 100 bases:
>100_bases AACCCGCCCATCACCCGAACGAGGTCCCGCCATGCAAGACGTGGTGCTGTTTGACGAACTGACTACCGGCGACGGCCATC GCATCGCCGTCGCCACCCTC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MPVQNRIHKGINMNSYAHLNVEKRGHTAVVTIDNPPANTWNRASLTALKQLVADLNADRDIYALVITGQGEKFFSAGADL NLFADGDKKVATEMTLLFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEAGVGLLPCAGGTQN LPWLVGEGWAKRMILCGERVNAATAERIGLVEQVVAKGEALAAALKLAEGVARQSPSSVGVCKQLVQAARTQPPAWNLIK EREAFIKLFDTQDQAEGTRAFLEKRAPNWKNA
Sequences:
>Translated_272_residues MPVQNRIHKGINMNSYAHLNVEKRGHTAVVTIDNPPANTWNRASLTALKQLVADLNADRDIYALVITGQGEKFFSAGADL NLFADGDKKVATEMTLLFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEAGVGLLPCAGGTQN LPWLVGEGWAKRMILCGERVNAATAERIGLVEQVVAKGEALAAALKLAEGVARQSPSSVGVCKQLVQAARTQPPAWNLIK EREAFIKLFDTQDQAEGTRAFLEKRAPNWKNA >Mature_271_residues PVQNRIHKGINMNSYAHLNVEKRGHTAVVTIDNPPANTWNRASLTALKQLVADLNADRDIYALVITGQGEKFFSAGADLN LFADGDKKVATEMTLLFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEAGVGLLPCAGGTQNL PWLVGEGWAKRMILCGERVNAATAERIGLVEQVVAKGEALAAALKLAEGVARQSPSSVGVCKQLVQAARTQPPAWNLIKE REAFIKLFDTQDQAEGTRAFLEKRAPNWKNA
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=261, Percent_Identity=34.0996168582375, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI68989263, Length=201, Percent_Identity=35.8208955223881, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI20127408, Length=200, Percent_Identity=37, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI4502327, Length=257, Percent_Identity=30.3501945525292, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI37594471, Length=212, Percent_Identity=27.8301886792453, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI37594469, Length=212, Percent_Identity=27.8301886792453, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI261878539, Length=109, Percent_Identity=41.2844036697248, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI31542718, Length=251, Percent_Identity=28.2868525896414, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI150378541, Length=245, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI70995211, Length=267, Percent_Identity=27.7153558052434, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI157694516, Length=170, Percent_Identity=24.7058823529412, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI213417737, Length=170, Percent_Identity=24.7058823529412, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787659, Length=258, Percent_Identity=39.5348837209302, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI221142681, Length=256, Percent_Identity=32.8125, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1788682, Length=215, Percent_Identity=35.3488372093023, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1790281, Length=193, Percent_Identity=32.6424870466321, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87082183, Length=261, Percent_Identity=24.904214559387, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787660, Length=267, Percent_Identity=29.5880149812734, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788597, Length=250, Percent_Identity=24.8, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17554946, Length=257, Percent_Identity=35.0194552529183, Blast_Score=136, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25145438, Length=256, Percent_Identity=34.375, Blast_Score=130, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17540714, Length=192, Percent_Identity=32.8125, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17558304, Length=182, Percent_Identity=35.7142857142857, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25144276, Length=180, Percent_Identity=38.3333333333333, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17508951, Length=180, Percent_Identity=38.3333333333333, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17508953, Length=180, Percent_Identity=38.3333333333333, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560910, Length=234, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17534483, Length=200, Percent_Identity=30, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536985, Length=238, Percent_Identity=25.6302521008403, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25141363, Length=160, Percent_Identity=31.875, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25144160, Length=190, Percent_Identity=28.4210526315789, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25144157, Length=190, Percent_Identity=28.4210526315789, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17549921, Length=213, Percent_Identity=27.2300469483568, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17535521, Length=218, Percent_Identity=25.6880733944954, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI20129971, Length=273, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24653477, Length=273, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24653139, Length=252, Percent_Identity=32.9365079365079, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI21357171, Length=195, Percent_Identity=29.7435897435897, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24650670, Length=272, Percent_Identity=27.5735294117647, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24654903, Length=192, Percent_Identity=25.5208333333333, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922422, Length=247, Percent_Identity=24.6963562753036, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24583077, Length=252, Percent_Identity=30.1587301587302, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24583079, Length=252, Percent_Identity=30.1587301587302, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI19921000, Length=252, Percent_Identity=30.1587301587302, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI19920382, Length=191, Percent_Identity=29.8429319371728, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 29129; Mature: 28997
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVQNRIHKGINMNSYAHLNVEKRGHTAVVTIDNPPANTWNRASLTALKQLVADLNADRD CCCHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC IYALVITGQGEKFFSAGADLNLFADGDKKVATEMTLLFGEAFEALSAFRGVSIAAINGYA EEEEEEECCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEE MGGGLECALACDIRIAEEQAQMALPEAGVGLLPCAGGTQNLPWLVGEGWAKRMILCGERV ECCCCEEEEEEEEEECHHHHHHCCCCCCCEEEECCCCCCCCCEEECCHHHHHHHHCCCCC NAATAERIGLVEQVVAKGEALAAALKLAEGVARQSPSSVGVCKQLVQAARTQPPAWNLIK CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH EREAFIKLFDTQDQAEGTRAFLEKRAPNWKNA HHHHHHHEECCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure PVQNRIHKGINMNSYAHLNVEKRGHTAVVTIDNPPANTWNRASLTALKQLVADLNADRD CCHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC IYALVITGQGEKFFSAGADLNLFADGDKKVATEMTLLFGEAFEALSAFRGVSIAAINGYA EEEEEEECCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEE MGGGLECALACDIRIAEEQAQMALPEAGVGLLPCAGGTQNLPWLVGEGWAKRMILCGERV ECCCCEEEEEEEEEECHHHHHHCCCCCCCEEEECCCCCCCCCEEECCHHHHHHHHCCCCC NAATAERIGLVEQVVAKGEALAAALKLAEGVARQSPSSVGVCKQLVQAARTQPPAWNLIK CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH EREAFIKLFDTQDQAEGTRAFLEKRAPNWKNA HHHHHHHEECCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]