| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497415
Identifier: 34497415
GI number: 34497415
Start: 2132086
End: 2133561
Strand: Direct
Name: 34497415
Synonym: CV_1960
Alternate gene names: NA
Gene position: 2132086-2133561 (Clockwise)
Preceding gene: 34497414
Following gene: 34497417
Centisome position: 44.88
GC content: 64.36
Gene sequence:
>1476_bases ATGAAGAGGTTACTGATCAGCGCGGCGATCGCGGCCCTGCCGGGCATGGCGATGGCCGACGCCAAGGCGGACGAGATCGC CAGACTGAAGGCCCAGATGCAGAAGCTGCAGCAGCAGATGGCGGAGCTGCAGAAGGCGGTGGAGGCGGCGACGGCCCCGG CCGGCGGCCAGAAGGCGGCCGCCGCGGCGGGCGGCGAGGACGCCAACGCCGAGTTGAAGGAGAGAGTGGCCAATATGGAA TTGAAGGTGGACAAGCTCAACACCGCCTCCACCGATGGCCCGATCGCCGGCCTGAGCGTCACCGGCTATCTGGATCCCAC CTACATCTACAACCGCAACAACAACAGCTCCGGCTTCCAGTTCCTGAACCACCAGAATGTCTACGCCTACAGCAACAGCA CCTTCGGCGACGTCTATCTGGACATCAAGAAAACCTTCGGCGTAGGCCCCACCGCGCCCAGCGCCGAAATCACCATCATG CCCAATCGCGGCAGCGGCAACACGCTGCTGGATGGAGGCAGCGGCAACAACATCATCAACACCGCGGTCATCAACTTCCC GCTGTCCGATACCTGGACTTTCAACGCCGGGCTGATGAACAGCTTCGGCGGCTACGAGGTGCAGCAGTCCAACCAGATGC TGACCCTGACCCACGGCCTGTTGTACGACTTCAGCGATCCGGGCAGCTATATCGGCGCCGGCTTCAACTGGAGCCACGAC GTGTGGGCGTGGAAGTTCCTGCTGGCCAACGAGCAGTACCGCACCCATGCCAACCTGGCCAATACCGGCAACAACGCCTC CACCGGCAATCCTCAGGTGAAGAGCAACAATACGCCGACCTTCACCGCGCGCGTCGACTACACCTGGAGCAGCGCGCTGG ACCTGGGCGGCTCGTTCAACGCCGGCCGCCAGACCTTGCTGACCGGCAATGCCTGCGCGGGCGGCTTCGGCTATCTGTGC GGCTCCGCCGATCCGTATTCCAATTACTTCTTCACCGAGGCTGACGCCAGCTACACGCTGGGCGACATCCAGTACAACGC CGAGCTGGATTACGGCCAGCAGCAGAAGGCGGCCTGGAATGGCGGCAGCGCGCAGTGGTACGGCGTGTCGCTGCTGGGCC ACCGCAAATGGATGACGGACTCGCTGGGCAAGATGGGCGCCACGCTGCGCTACGACTACCTGAACAACAGCAAGAACGGC GGCGGCGGCGGCGGGGTGGCGCTGGGTTCCGGCGGCTTCGACGGCGTCAACGGCTTCGGCGTCGATCCGGCCTGCCTGGC CAGCGGTGCCGCCGACTGCAAGGGCGCCAACCGCATGGCGCTGACCGCCGCTCTGTTGTTCTTCCCGACCGACCAGTTCA CGCTGAAGTTCGAATACCGGCACGACTGGGCCAGCCAGGCCGTGTTCCAGCGCAACGACGGCAGCATGAAGAAGAGCAAC GACATGCTGGGCGCGCAGGCGGTCTACACCTTCTGA
Upstream 100 bases:
>100_bases ACGCGCAAGCGGGAAAAGGAGATGAGGCTGGCTTTCGCCAACGGTTGAGATCGAATGCGGTGAAAACGACAACGGCAGTG CGGCACAAGGAGAAATGACG
Downstream 100 bases:
>100_bases TTGTTTTCCTCTCCCTTGGGCAGCGGCCGTCCGCTGCCTTTTTTATTTTCGCCGCTTCCCGATAAATGCCTATATCATTC CCGGCCGCTGGCGGCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAAAAAGGEDANAELKERVANME LKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQFLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIM PNRGSGNTLLDGGSGNNIINTAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFNAGRQTLLTGNACAGGFGYLC GSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWNGGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNG GGGGGVALGSGGFDGVNGFGVDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN DMLGAQAVYTF
Sequences:
>Translated_491_residues MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAAAAAGGEDANAELKERVANME LKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQFLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIM PNRGSGNTLLDGGSGNNIINTAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFNAGRQTLLTGNACAGGFGYLC GSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWNGGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNG GGGGGVALGSGGFDGVNGFGVDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN DMLGAQAVYTF >Mature_491_residues MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAAAAAGGEDANAELKERVANME LKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQFLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIM PNRGSGNTLLDGGSGNNIINTAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFNAGRQTLLTGNACAGGFGYLC GSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWNGGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNG GGGGGVALGSGGFDGVNGFGVDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN DMLGAQAVYTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52381; Mature: 52381
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAA CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAAGGEDANAELKERVANMELKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQ HCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCEE FLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIMPNRGSGNTLLDGGSGNNIIN EECCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEE TAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD EEEEECCCCCCEEECCCHHCCCCCEEEECCCCEEEEEECEEEEECCCCCEEECCCCCCCC VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFN CEEEEEEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEHHHHCCCCCCC AGRQTLLTGNACAGGFGYLCGSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWN CCCEEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHCCCC GGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNGGGGGGVALGSGGFDGVNGFG CCCCEEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCC VDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN CCHHHHHCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHHHEECCCCCCCCCC DMLGAQAVYTF CCCCCEEEEEC >Mature Secondary Structure MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAA CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAAGGEDANAELKERVANMELKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQ HCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCEE FLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIMPNRGSGNTLLDGGSGNNIIN EECCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEE TAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD EEEEECCCCCCEEECCCHHCCCCCEEEECCCCEEEEEECEEEEECCCCCEEECCCCCCCC VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFN CEEEEEEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEHHHHCCCCCCC AGRQTLLTGNACAGGFGYLCGSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWN CCCEEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHCCCC GGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNGGGGGGVALGSGGFDGVNGFG CCCCEEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCC VDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN CCHHHHHCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHHHEECCCCCCCCCC DMLGAQAVYTF CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA