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The map label for this gene is chiA

Identifier: 34497352

GI number: 34497352

Start: 2063569

End: 2064888

Strand: Reverse

Name: chiA

Synonym: CV_1897

Alternate gene names: NA

Gene position: 2064888-2063569 (Counterclockwise)

Preceding gene: 34497353

Following gene: 34497347

Centisome position: 43.46

GC content: 65.15

Gene sequence:

>1320_bases
ATGAAACTGTCAGCCTTCATCATCCTGTCCCTGTTGCCGCTCCCCGCCCTGGCCGCGCCATGGCAAGCCCGCGCCATCTA
TCAGAAGGGCCAGACAGTGCAGTGGCAGGGCCGCGACTGGCAAGCCAAGTGGCCCACCCGCGGCGAAACGCCGGGAGCCA
ATCCCAAGGGCTCCTGGATCGCCCATGTCGATGGCGCCATGCGCAAGCTGGATGACGCCGCGCCCCCGGTCCCGACGCTG
CAACAGGCCTTGCAGCACGAGGCCGAGCTGACCAACAACGACTTCTTCCGCAAGGTGAAGGCTTCCATCCGCACGCTGTC
CAACGAGCAGGTGGAACAGGTGGCCCCGGGCCGCGCCGCCAATCCGGTCAACGTGCGCCGCGTCGAGCGGCTGCTGCCGT
CGGCCAAATGGGACTATTACTTCAGCCGCCGCGACGCCAGCTACACCTACACCCGCTTCCTGCAGGCGGTGGCCAAATTC
CCCGGCGTCTGCGACGACTACGGCGACGGCCGCGACGCCGATGCCATCTGCCGCCATAGCCTCGCCACCATGTTCGCCCA
CTTCGGCCAGGAAACCGGCAACCACGACGCCAGCGACACCGTGCCGCAATGGCGGCAGGGCCTGGCCTACCTGCGCGAGA
TGGGCTGCGCCGACAGCGGCAGCGCCTGCGGTTACAACACCGAGTGCAACGATCCGGTGTTCAACAAGGTATGGACCTGC
GGCAAGAACCCCGACGGCAGCTGGAAGAAATACTACGGCCGCGGCGCCAAGCAGCTGTCGTACAACTACAACTACGGTCC
GTTCTCGCAGGCGATGAACAACGGCGACCAGTCGGTGCTGCTGCAAAACCCGGACCTGGTGGCCAGCACCTGGCTCAACC
TCGCCTCCGCCACCTTCTTCTTCGTCTATCCGCAGCCGCCCAAGCCATCCATGCTGCATGTGATTGATGGCACCTGGGTG
CCCAACGCCGCGGACAAGGCGGCCGGCGCCGGCAACAACTTCGCCACCACCATCCAGATCATCAACGGCGAATGCGGCGG
CGGCACCGAGCGCCAGGCGGCGCAAAACCGCATCGACTACTACAAGCAGTTCGCCCATGACCTGGGCTGGGACTACGGCG
GCGAGCAGCTGTCCTGCGCCAATATGCAGCGCTTCACCTCGGCCAGCTCCGCCGCCTACAACATCTACTGGGAAAAGGAC
TGGCAGTGGCAGCACGACTACCAGTGCCAGCTGGTCAGCTACCAGACGCCGTACAGCGCCTTGCAGGCAGGCAACTACCA
GCGCTGCGTCGAGGACAACTGGGGCGTCAAGCTGAAATAG

Upstream 100 bases:

>100_bases
ATGGATTGAACTGACGGCACAGATTTGCAATTGACATATCTCATATTGGTTCCATAGTGGTATTACGTGCCGATCGGCAT
GCCCACCATGAGGAACCGAT

Downstream 100 bases:

>100_bases
GCGCGGAAAAGCGAAGGCCGGAACCCTCTGCGGGTTCCGGCCTGCCAACATGTCCACGCGCCCCTAAGCCGGACGCCGGC
GAGTCAGAACTGGACCTGCT

Product: endochitinase

Products: NA

Alternate protein names: Basic Endochitinase; Endochitinase

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKLSAFIILSLLPLPALAAPWQARAIYQKGQTVQWQGRDWQAKWPTRGETPGANPKGSWIAHVDGAMRKLDDAAPPVPTL
QQALQHEAELTNNDFFRKVKASIRTLSNEQVEQVAPGRAANPVNVRRVERLLPSAKWDYYFSRRDASYTYTRFLQAVAKF
PGVCDDYGDGRDADAICRHSLATMFAHFGQETGNHDASDTVPQWRQGLAYLREMGCADSGSACGYNTECNDPVFNKVWTC
GKNPDGSWKKYYGRGAKQLSYNYNYGPFSQAMNNGDQSVLLQNPDLVASTWLNLASATFFFVYPQPPKPSMLHVIDGTWV
PNAADKAAGAGNNFATTIQIINGECGGGTERQAAQNRIDYYKQFAHDLGWDYGGEQLSCANMQRFTSASSAAYNIYWEKD
WQWQHDYQCQLVSYQTPYSALQAGNYQRCVEDNWGVKLK

Sequences:

>Translated_439_residues
MKLSAFIILSLLPLPALAAPWQARAIYQKGQTVQWQGRDWQAKWPTRGETPGANPKGSWIAHVDGAMRKLDDAAPPVPTL
QQALQHEAELTNNDFFRKVKASIRTLSNEQVEQVAPGRAANPVNVRRVERLLPSAKWDYYFSRRDASYTYTRFLQAVAKF
PGVCDDYGDGRDADAICRHSLATMFAHFGQETGNHDASDTVPQWRQGLAYLREMGCADSGSACGYNTECNDPVFNKVWTC
GKNPDGSWKKYYGRGAKQLSYNYNYGPFSQAMNNGDQSVLLQNPDLVASTWLNLASATFFFVYPQPPKPSMLHVIDGTWV
PNAADKAAGAGNNFATTIQIINGECGGGTERQAAQNRIDYYKQFAHDLGWDYGGEQLSCANMQRFTSASSAAYNIYWEKD
WQWQHDYQCQLVSYQTPYSALQAGNYQRCVEDNWGVKLK
>Mature_439_residues
MKLSAFIILSLLPLPALAAPWQARAIYQKGQTVQWQGRDWQAKWPTRGETPGANPKGSWIAHVDGAMRKLDDAAPPVPTL
QQALQHEAELTNNDFFRKVKASIRTLSNEQVEQVAPGRAANPVNVRRVERLLPSAKWDYYFSRRDASYTYTRFLQAVAKF
PGVCDDYGDGRDADAICRHSLATMFAHFGQETGNHDASDTVPQWRQGLAYLREMGCADSGSACGYNTECNDPVFNKVWTC
GKNPDGSWKKYYGRGAKQLSYNYNYGPFSQAMNNGDQSVLLQNPDLVASTWLNLASATFFFVYPQPPKPSMLHVIDGTWV
PNAADKAAGAGNNFATTIQIINGECGGGTERQAAQNRIDYYKQFAHDLGWDYGGEQLSCANMQRFTSASSAAYNIYWEKD
WQWQHDYQCQLVSYQTPYSALQAGNYQRCVEDNWGVKLK

Specific function: Unknown

COG id: COG3979

COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17563934, Length=302, Percent_Identity=31.4569536423841, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI71983294, Length=161, Percent_Identity=36.6459627329193, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983301, Length=161, Percent_Identity=36.6459627329193, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17564732, Length=286, Percent_Identity=30.0699300699301, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17563086, Length=286, Percent_Identity=30.0699300699301, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17565884, Length=202, Percent_Identity=31.1881188118812, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49207; Mature: 49207

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSAFIILSLLPLPALAAPWQARAIYQKGQTVQWQGRDWQAKWPTRGETPGANPKGSWI
CCCHHHHHHHHHCCHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE
AHVDGAMRKLDDAAPPVPTLQQALQHEAELTNNDFFRKVKASIRTLSNEQVEQVAPGRAA
EEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NPVNVRRVERLLPSAKWDYYFSRRDASYTYTRFLQAVAKFPGVCDDYGDGRDADAICRHS
CCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
LATMFAHFGQETGNHDASDTVPQWRQGLAYLREMGCADSGSACGYNTECNDPVFNKVWTC
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEC
GKNPDGSWKKYYGRGAKQLSYNYNYGPFSQAMNNGDQSVLLQNPDLVASTWLNLASATFF
CCCCCCCHHHHHCCCCCEEECCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCEEE
FVYPQPPKPSMLHVIDGTWVPNAADKAAGAGNNFATTIQIINGECGGGTERQAAQNRIDY
EEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
YKQFAHDLGWDYGGEQLSCANMQRFTSASSAAYNIYWEKDWQWQHDYQCQLVSYQTPYSA
HHHHHHHCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHH
LQAGNYQRCVEDNWGVKLK
HHCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MKLSAFIILSLLPLPALAAPWQARAIYQKGQTVQWQGRDWQAKWPTRGETPGANPKGSWI
CCCHHHHHHHHHCCHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE
AHVDGAMRKLDDAAPPVPTLQQALQHEAELTNNDFFRKVKASIRTLSNEQVEQVAPGRAA
EEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NPVNVRRVERLLPSAKWDYYFSRRDASYTYTRFLQAVAKFPGVCDDYGDGRDADAICRHS
CCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
LATMFAHFGQETGNHDASDTVPQWRQGLAYLREMGCADSGSACGYNTECNDPVFNKVWTC
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEEC
GKNPDGSWKKYYGRGAKQLSYNYNYGPFSQAMNNGDQSVLLQNPDLVASTWLNLASATFF
CCCCCCCHHHHHCCCCCEEECCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCEEE
FVYPQPPKPSMLHVIDGTWVPNAADKAAGAGNNFATTIQIINGECGGGTERQAAQNRIDY
EEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
YKQFAHDLGWDYGGEQLSCANMQRFTSASSAAYNIYWEKDWQWQHDYQCQLVSYQTPYSA
HHHHHHHCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHH
LQAGNYQRCVEDNWGVKLK
HHCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA