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The map label for this gene is infA1

Identifier: 34497353

GI number: 34497353

Start: 2065091

End: 2065357

Strand: Reverse

Name: infA1

Synonym: CV_1898

Alternate gene names: 34497353

Gene position: 2065357-2065091 (Counterclockwise)

Preceding gene: 34497354

Following gene: 34497352

Centisome position: 43.47

GC content: 62.92

Gene sequence:

>267_bases
ATGTCCAAGGAAGACATGATCGAACTGGAAGGCGTCGTCATCGAAATGCTGCCCGAGTCCCGCTTTCGCGTGAGGCTGGA
CAACAATATGGAGATCCTGGCCTACGGCTCCGGCAAGATGAAGATGCACCGCATCCGCGTGCTGCTGGGCGACCGCGTGA
CCGTGGAAATGTCGCCGTACGACCTGACCAAGGGCCGCATCAATTTCCGCCACCCGACCGCCAATCCCGGCGCCGGCCCG
CGTCCGTCCCACCACCACCGCCGCTAA

Upstream 100 bases:

>100_bases
ATTCCGCAGGTCACCGAACTGAAGCTCAAACGCCTCGCCGCGGCAGTCGCACCGACCGCCGCGCGAAGCCATTTCATTAC
CGTATGAGAAAGGAAACGCT

Downstream 100 bases:

>100_bases
GCGCGCCGGGCAGTCCGCTGCCCCCGCGCTTTACGCGTCTTCTCCAGGCCGGCTTCGCGCCCAGCGCCCGCCTCGGACGC
CGCGCTTTCCATCGCTTCCG

Product: translation initiation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSKEDMIELEGVVIEMLPESRFRVRLDNNMEILAYGSGKMKMHRIRVLLGDRVTVEMSPYDLTKGRINFRHPTANPGAGP
RPSHHHRR

Sequences:

>Translated_88_residues
MSKEDMIELEGVVIEMLPESRFRVRLDNNMEILAYGSGKMKMHRIRVLLGDRVTVEMSPYDLTKGRINFRHPTANPGAGP
RPSHHHRR
>Mature_87_residues
SKEDMIELEGVVIEMLPESRFRVRLDNNMEILAYGSGKMKMHRIRVLLGDRVTVEMSPYDLTKGRINFRHPTANPGAGPR
PSHHHRR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=57.1428571428571, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF11_CHRVO (Q7NWT1)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901568.1
- ProteinModelPortal:   Q7NWT1
- SMR:   Q7NWT1
- GeneID:   2547110
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_1898
- NMPDR:   fig|243365.1.peg.1898
- HOGENOM:   HBG286099
- OMA:   VQLDAGH
- BioCyc:   CVIO243365:CV_1898-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 10181; Mature: 10050

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEDMIELEGVVIEMLPESRFRVRLDNNMEILAYGSGKMKMHRIRVLLGDRVTVEMSPY
CCCCCEEEECCEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECCEEEEEECCC
DLTKGRINFRHPTANPGAGPRPSHHHRR
CCCCCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKEDMIELEGVVIEMLPESRFRVRLDNNMEILAYGSGKMKMHRIRVLLGDRVTVEMSPY
CCCCEEEECCEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECCEEEEEECCC
DLTKGRINFRHPTANPGAGPRPSHHHRR
CCCCCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782