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The map label for this gene is yajR [H]

Identifier: 34497347

GI number: 34497347

Start: 2057747

End: 2059108

Strand: Reverse

Name: yajR [H]

Synonym: CV_1892

Alternate gene names: 34497347

Gene position: 2059108-2057747 (Counterclockwise)

Preceding gene: 34497352

Following gene: 34497345

Centisome position: 43.34

GC content: 67.18

Gene sequence:

>1362_bases
ATGAATGCCACTGAATTGCGGGCCAGCCTGGGGCTGGCCGGTATCTACGCCCTGCGCATGCTGGGCATGTTCCTGATCCT
GCCCGTCTTCGCCATCTACGCCAAAACCCTGCAGGGCGCCGACAACCACACGCTGATCGGCATCGCGCTGGGCAGCTACG
GCCTGACCCAGGCCCTGCTGCAGCTGCCGCTGGGCATGCTGTCCGACCGCATCGGCCGCAAGAAAGTGATCTACGGCGGC
CTGCTCCTGTTCGCCATCGGCAGCTTCGTCGCCGCCGGCGCGCACGACATCGCCACCCTCACCGTGGGCCGCGTGATCCA
GGGCGCCGGCGCCATCTCCGCCGCCATCACCGCGCTGCTGGCCGACCTTACCCGCGAGGAGAACCGCACCAAGGCGATGG
CGATGATAGGCATGTCCATCGGCACCACCTTCGCCGCCAGCCTGGTGCTGGGCCCCATCCTGGCCAAGTTCATCGGCGTC
AACGGCATCTTCGCCCTCACCGGCTTCCTGTCGCTGGCCGCGTTGATCGGCGTGTGGCTGCTCATCCCCGACCCGGCCCA
GTCCCGCTTCCACTCCGACACCGAGGCCAACGCCAAGCGCCTGCCGGCGGTGATGAAGAACGGCCAGCTGCTGCGGCTCA
ATTACGGCATCTTCGCGCTGCACGCGGCGCAGATGGCGATGTTCGTCACCGTGCCGTTCGCGCTGATCAAGACCGCGCAC
CTGGACAAGTCCCAGCACTGGGAGGTCTACCTGCCGGTGACGGTGATAGGTTTCATCCTGATGGTGCCGGCCATCATCTA
CGGCGAAAAGAAAGCCAGGCTGAAGCCGGTGTTCGTCGGCGCCATCGCGCTGATGACGGCCGCCCAGCTGGGCATGGCGC
TGGCGCTGGACAGCTTCTGGCTGATCGTGGTCTGGCTGTCGCTGTACTTCATCGCCTTCAACATCCTGGAAGCCACCCTG
CCCTCGCTGATCTCCAAGATCGCCCCCGCCGACGCCAAGGGCACCGCGATCGGCGTGTACAACACCTCGCAATCGTTCGG
CCTGTTCCTGGGCGCGGCCGCCGGCGGCTGGCTGTACAGCCATTACGGGCCGGCCGGCGTGTTCGGCTTCACCACGCTGC
TGATGCTGTCGTGGCTGGCCTGGTCGCTGGGCATGCAGCCGCCCAAGGCGGTGCGCTCGGTGATGTTCCACATCGGCGAG
TCCTGGCGCGGCGACGCCGACGCGCTGTCCCGCGAGCTGGCCGGCGTGGCCGGCGTGCACGAGGCTTCGGTGCTGCTGGC
CGACCGTGTCGCCTACCTGAAGGTGTCCCAGCAGCAGTGGGACGAGGCCGAGGTCAAGCGGCTGATCGAAGCCACGTTCT
GA

Upstream 100 bases:

>100_bases
GCCCGGCTCCACTTGTCCTTGCAATGACGGTGCAAAGGCGTCATCCGTTTGCCCGGCGCGGTCGTTACAATCCAGATACG
CAAAACCGAAATCTCACCGC

Downstream 100 bases:

>100_bases
TCCCGTCGCCGGCATGAATGCGACAAGGGCGGCCACCCCAAGGGGTGCCGCCCTTTTTGATCGCCCCGGATGCCGGCTTA
CTTGGCCTGCGCCGGCTCCG

Product: integral membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MNATELRASLGLAGIYALRMLGMFLILPVFAIYAKTLQGADNHTLIGIALGSYGLTQALLQLPLGMLSDRIGRKKVIYGG
LLLFAIGSFVAAGAHDIATLTVGRVIQGAGAISAAITALLADLTREENRTKAMAMIGMSIGTTFAASLVLGPILAKFIGV
NGIFALTGFLSLAALIGVWLLIPDPAQSRFHSDTEANAKRLPAVMKNGQLLRLNYGIFALHAAQMAMFVTVPFALIKTAH
LDKSQHWEVYLPVTVIGFILMVPAIIYGEKKARLKPVFVGAIALMTAAQLGMALALDSFWLIVVWLSLYFIAFNILEATL
PSLISKIAPADAKGTAIGVYNTSQSFGLFLGAAAGGWLYSHYGPAGVFGFTTLLMLSWLAWSLGMQPPKAVRSVMFHIGE
SWRGDADALSRELAGVAGVHEASVLLADRVAYLKVSQQQWDEAEVKRLIEATF

Sequences:

>Translated_453_residues
MNATELRASLGLAGIYALRMLGMFLILPVFAIYAKTLQGADNHTLIGIALGSYGLTQALLQLPLGMLSDRIGRKKVIYGG
LLLFAIGSFVAAGAHDIATLTVGRVIQGAGAISAAITALLADLTREENRTKAMAMIGMSIGTTFAASLVLGPILAKFIGV
NGIFALTGFLSLAALIGVWLLIPDPAQSRFHSDTEANAKRLPAVMKNGQLLRLNYGIFALHAAQMAMFVTVPFALIKTAH
LDKSQHWEVYLPVTVIGFILMVPAIIYGEKKARLKPVFVGAIALMTAAQLGMALALDSFWLIVVWLSLYFIAFNILEATL
PSLISKIAPADAKGTAIGVYNTSQSFGLFLGAAAGGWLYSHYGPAGVFGFTTLLMLSWLAWSLGMQPPKAVRSVMFHIGE
SWRGDADALSRELAGVAGVHEASVLLADRVAYLKVSQQQWDEAEVKRLIEATF
>Mature_453_residues
MNATELRASLGLAGIYALRMLGMFLILPVFAIYAKTLQGADNHTLIGIALGSYGLTQALLQLPLGMLSDRIGRKKVIYGG
LLLFAIGSFVAAGAHDIATLTVGRVIQGAGAISAAITALLADLTREENRTKAMAMIGMSIGTTFAASLVLGPILAKFIGV
NGIFALTGFLSLAALIGVWLLIPDPAQSRFHSDTEANAKRLPAVMKNGQLLRLNYGIFALHAAQMAMFVTVPFALIKTAH
LDKSQHWEVYLPVTVIGFILMVPAIIYGEKKARLKPVFVGAIALMTAAQLGMALALDSFWLIVVWLSLYFIAFNILEATL
PSLISKIAPADAKGTAIGVYNTSQSFGLFLGAAAGGWLYSHYGPAGVFGFTTLLMLSWLAWSLGMQPPKAVRSVMFHIGE
SWRGDADALSRELAGVAGVHEASVLLADRVAYLKVSQQQWDEAEVKRLIEATF

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=451, Percent_Identity=41.6851441241685, Blast_Score=332, Evalue=3e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48410; Mature: 48410

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATELRASLGLAGIYALRMLGMFLILPVFAIYAKTLQGADNHTLIGIALGSYGLTQALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHH
QLPLGMLSDRIGRKKVIYGGLLLFAIGSFVAAGAHDIATLTVGRVIQGAGAISAAITALL
HCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
ADLTREENRTKAMAMIGMSIGTTFAASLVLGPILAKFIGVNGIFALTGFLSLAALIGVWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIPDPAQSRFHSDTEANAKRLPAVMKNGQLLRLNYGIFALHAAQMAMFVTVPFALIKTAH
CCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LDKSQHWEVYLPVTVIGFILMVPAIIYGEKKARLKPVFVGAIALMTAAQLGMALALDSFW
CCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIVVWLSLYFIAFNILEATLPSLISKIAPADAKGTAIGVYNTSQSFGLFLGAAAGGWLYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHEEECCCCCCHHH
HYGPAGVFGFTTLLMLSWLAWSLGMQPPKAVRSVMFHIGESWRGDADALSRELAGVAGVH
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
EASVLLADRVAYLKVSQQQWDEAEVKRLIEATF
HHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MNATELRASLGLAGIYALRMLGMFLILPVFAIYAKTLQGADNHTLIGIALGSYGLTQALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHH
QLPLGMLSDRIGRKKVIYGGLLLFAIGSFVAAGAHDIATLTVGRVIQGAGAISAAITALL
HCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
ADLTREENRTKAMAMIGMSIGTTFAASLVLGPILAKFIGVNGIFALTGFLSLAALIGVWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIPDPAQSRFHSDTEANAKRLPAVMKNGQLLRLNYGIFALHAAQMAMFVTVPFALIKTAH
CCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LDKSQHWEVYLPVTVIGFILMVPAIIYGEKKARLKPVFVGAIALMTAAQLGMALALDSFW
CCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIVVWLSLYFIAFNILEATLPSLISKIAPADAKGTAIGVYNTSQSFGLFLGAAAGGWLYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHEEECCCCCCHHH
HYGPAGVFGFTTLLMLSWLAWSLGMQPPKAVRSVMFHIGESWRGDADALSRELAGVAGVH
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
EASVLLADRVAYLKVSQQQWDEAEVKRLIEATF
HHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]