| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is bvgS [H]
Identifier: 34497307
GI number: 34497307
Start: 2006736
End: 2008394
Strand: Reverse
Name: bvgS [H]
Synonym: CV_1852
Alternate gene names: 34497307
Gene position: 2008394-2006736 (Counterclockwise)
Preceding gene: 34497309
Following gene: 34497306
Centisome position: 42.27
GC content: 67.33
Gene sequence:
>1659_bases CTGGAGATGGCCATCACCCGCATGCCTGAGCTGGATGGCATCGGCTTCAACATGACGCTGCGCGACATCTCTGCCCGCAA GGCGGCCGAACAGGAGCTGCGCCGCGCCCACGATCAGGCCAACGCCGCCAATCAGGCCAAGACCGCCTTCCTCACCACCA TCAGCCATGAGATACGCACGCCGATGAACGGCGTGCTGGGGATGCTGGAGTTGCTGCAGATGAGCCGCCTGGACGAGGAA CAGCAGGACACGCTGGCCACGGCCCGCGAATCGGCTCAATTGCTGCTGAGGCTGATAGACGACATCCTGGACTTCGCCAA AATAGAGGCGGACCAGATGGAAGTGGTGTACGCCGCCACCCCTATCCGCCCCCTGCTGCAACAGGTGCACAGCCTGTATG CCCAGGCGGCCGAACGCAAGGGTCTGAGGATGGAGCTGGAGATGGACGACGCGCTGGCCGGCGCGCTGCGGGTCGACCCC CTGCGCCTGCGCCAGGTGCTGCAGAACTTCCTCAGCAACGCGGTGAAATTCACGGCCACCGGCAGCGTGAAGCTTCGCGC CGCGGTGGAAGCCGACGACGGCCGCCGCCAGCGGCTGCGCTTCGACGTGACGGATACCGGCATCGGCATGGACCGCGACC AGCTGGCCCGGCTGTTCCAGCCCTTCACCCAGGCAGAGTCCGATACCGCCCGGCATTACGGCGGAGCCGGCCTGGGACTC AGCATCAGCCGCCGCCTGGCGACGCTGATGGGCGGCGCGGTGGAGCTGCAGAGCGAGCTCGGCCTCGGAACCTGCGCGTC GCTGCTACTTTCGGCGGACATCGCCGACGCGGCCGACATCCAGCCTACGCTGCCGCCCGCCCCCCGCGCCGTGGCCGCCC ACGACGCGCCCCCCGCCGTGCTGCTGGTCGAGGACAACCCCACCAATCTCAAGCTGGCGAAACTGCAGCTGGAAAAGCTG GGCTACCGCGTCGAATGCGCCGAAGACGGCGCCCAGGCCTTCGAGAAATGGCAACGCGGCCGTTACCAGCTGCTGTTGAC CGACTGCCAGATGCCCAATGTGGACGGTTACCAGCTCTCCCGGCTGGTCCGCTCCTACGAGGCCGGCAATCCCCACCGGC CCCGCATCCCCATCATCGCCTGCACCGCCAACTCCGGCGAGGCGGAGCAGGAGGCGACGGCGGCGGCCGGCATGGATGGC TACCTGCTCAAACCGCTGGCGTTGTCGGAACTGGCCGAGATGCTGGAAAGCAAGCTGTACCCGCCATCCGCCGAGCGCCC CGCGCCGCCGTTGCCCGCCCATGCGCCGCCGGTGAACCTGGCTACGCTCAGCCTCAGCTGCGAAGGCAACCGCAAACTGG AAAACCGGCTGTTGACCGAGTTCCTGCTCAACGCCAGGCATGACATCGCCCGCATGCGCGCCGCGATCGCCAGCGGCAAT CTGCAGCACCTGCGCGCCATATCCGACGGTCTGCGCGACAGCGCCGCGATTGTCGGCGCCGGCTTGATTTCCACTATGGC CGCACTGATGGCGCAGGCTACCCGGGAGGGACAAATGGACAGCGCGCCCAGGCTGCTGCTTTTGCTGGAAGGATGCTGCC GAGAGCTGGAGCAATGGTTGACCCAGCGCGAGGAAAGCGGCAGCCTGAGTCCAGGCTGA
Upstream 100 bases:
>100_bases GGACGCGCTGATGTCCATCGTGCTGGGCGACGGCGACGCCGGCCAGCTCGGCCAGCTGCAGCAGCTGACCGCCGCGCGCG CCGACGGCAGCCTGTTCCCG
Downstream 100 bases:
>100_bases ACCGGAGCGAGCGGAACATGAAAGCGGACATGAAGGTCAGACGCCTGCTGGACAGCATCATCATCCGCCTGCTGGCGCTG TCTCTGGCCATCATGATCAT
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MEMAITRMPELDGIGFNMTLRDISARKAAEQELRRAHDQANAANQAKTAFLTTISHEIRTPMNGVLGMLELLQMSRLDEE QQDTLATARESAQLLLRLIDDILDFAKIEADQMEVVYAATPIRPLLQQVHSLYAQAAERKGLRMELEMDDALAGALRVDP LRLRQVLQNFLSNAVKFTATGSVKLRAAVEADDGRRQRLRFDVTDTGIGMDRDQLARLFQPFTQAESDTARHYGGAGLGL SISRRLATLMGGAVELQSELGLGTCASLLLSADIADAADIQPTLPPAPRAVAAHDAPPAVLLVEDNPTNLKLAKLQLEKL GYRVECAEDGAQAFEKWQRGRYQLLLTDCQMPNVDGYQLSRLVRSYEAGNPHRPRIPIIACTANSGEAEQEATAAAGMDG YLLKPLALSELAEMLESKLYPPSAERPAPPLPAHAPPVNLATLSLSCEGNRKLENRLLTEFLLNARHDIARMRAAIASGN LQHLRAISDGLRDSAAIVGAGLISTMAALMAQATREGQMDSAPRLLLLLEGCCRELEQWLTQREESGSLSPG
Sequences:
>Translated_552_residues MEMAITRMPELDGIGFNMTLRDISARKAAEQELRRAHDQANAANQAKTAFLTTISHEIRTPMNGVLGMLELLQMSRLDEE QQDTLATARESAQLLLRLIDDILDFAKIEADQMEVVYAATPIRPLLQQVHSLYAQAAERKGLRMELEMDDALAGALRVDP LRLRQVLQNFLSNAVKFTATGSVKLRAAVEADDGRRQRLRFDVTDTGIGMDRDQLARLFQPFTQAESDTARHYGGAGLGL SISRRLATLMGGAVELQSELGLGTCASLLLSADIADAADIQPTLPPAPRAVAAHDAPPAVLLVEDNPTNLKLAKLQLEKL GYRVECAEDGAQAFEKWQRGRYQLLLTDCQMPNVDGYQLSRLVRSYEAGNPHRPRIPIIACTANSGEAEQEATAAAGMDG YLLKPLALSELAEMLESKLYPPSAERPAPPLPAHAPPVNLATLSLSCEGNRKLENRLLTEFLLNARHDIARMRAAIASGN LQHLRAISDGLRDSAAIVGAGLISTMAALMAQATREGQMDSAPRLLLLLEGCCRELEQWLTQREESGSLSPG >Mature_552_residues MEMAITRMPELDGIGFNMTLRDISARKAAEQELRRAHDQANAANQAKTAFLTTISHEIRTPMNGVLGMLELLQMSRLDEE QQDTLATARESAQLLLRLIDDILDFAKIEADQMEVVYAATPIRPLLQQVHSLYAQAAERKGLRMELEMDDALAGALRVDP LRLRQVLQNFLSNAVKFTATGSVKLRAAVEADDGRRQRLRFDVTDTGIGMDRDQLARLFQPFTQAESDTARHYGGAGLGL SISRRLATLMGGAVELQSELGLGTCASLLLSADIADAADIQPTLPPAPRAVAAHDAPPAVLLVEDNPTNLKLAKLQLEKL GYRVECAEDGAQAFEKWQRGRYQLLLTDCQMPNVDGYQLSRLVRSYEAGNPHRPRIPIIACTANSGEAEQEATAAAGMDG YLLKPLALSELAEMLESKLYPPSAERPAPPLPAHAPPVNLATLSLSCEGNRKLENRLLTEFLLNARHDIARMRAAIASGN LQHLRAISDGLRDSAAIVGAGLISTMAALMAQATREGQMDSAPRLLLLLEGCCRELEQWLTQREESGSLSPG
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=423, Percent_Identity=37.1158392434988, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1788713, Length=420, Percent_Identity=32.8571428571429, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI87081816, Length=407, Percent_Identity=34.1523341523341, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI145693157, Length=246, Percent_Identity=36.9918699186992, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1789149, Length=244, Percent_Identity=36.8852459016393, Blast_Score=166, Evalue=4e-42, Organism=Escherichia coli, GI87082128, Length=269, Percent_Identity=27.5092936802974, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1786600, Length=240, Percent_Identity=27.9166666666667, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788393, Length=213, Percent_Identity=27.2300469483568, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1786783, Length=221, Percent_Identity=27.1493212669683, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788549, Length=275, Percent_Identity=23.6363636363636, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1790436, Length=263, Percent_Identity=25.8555133079848, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786912, Length=249, Percent_Identity=28.5140562248996, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788279, Length=224, Percent_Identity=24.1071428571429, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788191, Length=116, Percent_Identity=35.3448275862069, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1787894, Length=229, Percent_Identity=30.1310043668122, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=72, Percent_Identity=41.6666666666667, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322000, Length=116, Percent_Identity=34.4827586206897, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 60175; Mature: 60175
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMAITRMPELDGIGFNMTLRDISARKAAEQELRRAHDQANAANQAKTAFLTTISHEIRT CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC PMNGVLGMLELLQMSRLDEEQQDTLATARESAQLLLRLIDDILDFAKIEADQMEVVYAAT CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC PIRPLLQQVHSLYAQAAERKGLRMELEMDDALAGALRVDPLRLRQVLQNFLSNAVKFTAT CHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEC GSVKLRAAVEADDGRRQRLRFDVTDTGIGMDRDQLARLFQPFTQAESDTARHYGGAGLGL CCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCH SISRRLATLMGGAVELQSELGLGTCASLLLSADIADAADIQPTLPPAPRAVAAHDAPPAV HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEE LLVEDNPTNLKLAKLQLEKLGYRVECAEDGAQAFEKWQRGRYQLLLTDCQMPNVDGYQLS EEEECCCCCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH RLVRSYEAGNPHRPRIPIIACTANSGEAEQEATAAAGMDGYLLKPLALSELAEMLESKLY HHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCCC PPSAERPAPPLPAHAPPVNLATLSLSCEGNRKLENRLLTEFLLNARHDIARMRAAIASGN CCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LQHLRAISDGLRDSAAIVGAGLISTMAALMAQATREGQMDSAPRLLLLLEGCCRELEQWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TQREESGSLSPG HHHHCCCCCCCC >Mature Secondary Structure MEMAITRMPELDGIGFNMTLRDISARKAAEQELRRAHDQANAANQAKTAFLTTISHEIRT CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC PMNGVLGMLELLQMSRLDEEQQDTLATARESAQLLLRLIDDILDFAKIEADQMEVVYAAT CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC PIRPLLQQVHSLYAQAAERKGLRMELEMDDALAGALRVDPLRLRQVLQNFLSNAVKFTAT CHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEC GSVKLRAAVEADDGRRQRLRFDVTDTGIGMDRDQLARLFQPFTQAESDTARHYGGAGLGL CCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCH SISRRLATLMGGAVELQSELGLGTCASLLLSADIADAADIQPTLPPAPRAVAAHDAPPAV HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEE LLVEDNPTNLKLAKLQLEKLGYRVECAEDGAQAFEKWQRGRYQLLLTDCQMPNVDGYQLS EEEECCCCCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH RLVRSYEAGNPHRPRIPIIACTANSGEAEQEATAAAGMDGYLLKPLALSELAEMLESKLY HHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHCCC PPSAERPAPPLPAHAPPVNLATLSLSCEGNRKLENRLLTEFLLNARHDIARMRAAIASGN CCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LQHLRAISDGLRDSAAIVGAGLISTMAALMAQATREGQMDSAPRLLLLLEGCCRELEQWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TQREESGSLSPG HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]