| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ptxB [H]
Identifier: 34497309
GI number: 34497309
Start: 2009892
End: 2010731
Strand: Reverse
Name: ptxB [H]
Synonym: CV_1854
Alternate gene names: 34497309
Gene position: 2010731-2009892 (Counterclockwise)
Preceding gene: 34497318
Following gene: 34497307
Centisome position: 42.32
GC content: 67.74
Gene sequence:
>840_bases ATGAATACGAAACCGCTGAACCGTTTGGCAAGCTGGATTTTCCTGGCCCTGGCATGCGCCGCCGCGCCGGCCCCGCGCGC CGCCCCGCTGCTTCGCGTCGGCGTGGTTCCCCAGCAATCGGCATTGAGCCTGGCGCAAGCCTGGGGTCCGCTGCTGCAAT ATTTGGGGGCGCAATGCGCGATGGAGCTGCGGTTTGAAACCGCCCCCGACATTCCCGCCTTCGAGCAGCGCGTCGCCGCC GGCAGCTACGATCTGGTCTACGTCAATCCGCTGCACTACGTCCAATTCCACGAGAAGCCGGGCTACTTGCCATTGGCGCG CGAAAAGGACCGCAAGCTGGTCGGGCTGATCGTGGTCCGCGGCGACAGCCCTGTGACCGAAGTGCGCCAGCTGGACGGCA TGGACCTGGCGCTGCCCGCGCCGGAGGCCTTCGCCGCCAGCGTGCTGCCGCGCATCGAACTGGAAAACATGGGCGTGCGC GCCAGGATTCATTACGTCGGCTCCCACGATTCGGTGTACCTGGGCGTCGCCCAAGGCCTGTTCGCCGCCGGCGGCGGCAT CAACCGCACCTGGCAACAGCAGCCCGAGGCGCTGCGCGGCAAGCTGCGCATCCTGTGGCAGACGCCGCCCTACACTCCGC ACGCCTTCGCCGCGCACCCGCGGCTGCCGGCCGCGCAGAAACGATGCCTGCAACGGGAGCTTGTCGGACTCTCCGAGCAG CCAGAGGGACAACGATTGCTGCGCCAGCTACAGCTGACGCCGCTGACCGAGGCGCAGGATAGCGACTGGAACGACATCCG CCGCCTCAAGCTGCGCTACCAGCCGCCGGTGGAGCGCTGA
Upstream 100 bases:
>100_bases GTGAATCGGGCATGAAGCTTGTCTTGCCGCGCTAGACCTATGCGCACGGAAAGCCCCGCCGCTCTTATCTATAGTGATGG CAGGACACAGGCGACGACAG
Downstream 100 bases:
>100_bases ACAATGTCATTCCGGCTGAAAACCATATTGGGGATCGCGCTGATCGAGATGATCATGCTCGGTCTGCTGCTGCATTTCGG CCTGGCGCTGCTGCACGACA
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNTKPLNRLASWIFLALACAAAPAPRAAPLLRVGVVPQQSALSLAQAWGPLLQYLGAQCAMELRFETAPDIPAFEQRVAA GSYDLVYVNPLHYVQFHEKPGYLPLAREKDRKLVGLIVVRGDSPVTEVRQLDGMDLALPAPEAFAASVLPRIELENMGVR ARIHYVGSHDSVYLGVAQGLFAAGGGINRTWQQQPEALRGKLRILWQTPPYTPHAFAAHPRLPAAQKRCLQRELVGLSEQ PEGQRLLRQLQLTPLTEAQDSDWNDIRRLKLRYQPPVER
Sequences:
>Translated_279_residues MNTKPLNRLASWIFLALACAAAPAPRAAPLLRVGVVPQQSALSLAQAWGPLLQYLGAQCAMELRFETAPDIPAFEQRVAA GSYDLVYVNPLHYVQFHEKPGYLPLAREKDRKLVGLIVVRGDSPVTEVRQLDGMDLALPAPEAFAASVLPRIELENMGVR ARIHYVGSHDSVYLGVAQGLFAAGGGINRTWQQQPEALRGKLRILWQTPPYTPHAFAAHPRLPAAQKRCLQRELVGLSEQ PEGQRLLRQLQLTPLTEAQDSDWNDIRRLKLRYQPPVER >Mature_279_residues MNTKPLNRLASWIFLALACAAAPAPRAAPLLRVGVVPQQSALSLAQAWGPLLQYLGAQCAMELRFETAPDIPAFEQRVAA GSYDLVYVNPLHYVQFHEKPGYLPLAREKDRKLVGLIVVRGDSPVTEVRQLDGMDLALPAPEAFAASVLPRIELENMGVR ARIHYVGSHDSVYLGVAQGLFAAGGGINRTWQQQPEALRGKLRILWQTPPYTPHAFAAHPRLPAAQKRCLQRELVGLSEQ PEGQRLLRQLQLTPLTEAQDSDWNDIRRLKLRYQPPVER
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 31038; Mature: 31038
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKPLNRLASWIFLALACAAAPAPRAAPLLRVGVVPQQSALSLAQAWGPLLQYLGAQCA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHE MELRFETAPDIPAFEQRVAAGSYDLVYVNPLHYVQFHEKPGYLPLAREKDRKLVGLIVVR EEEEECCCCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEE GDSPVTEVRQLDGMDLALPAPEAFAASVLPRIELENMGVRARIHYVGSHDSVYLGVAQGL CCCCHHHHHHCCCCEEECCCCHHHHHHHCCCEEECCCCEEEEEEEECCCCCEEEEHHHHH FAAGGGINRTWQQQPEALRGKLRILWQTPPYTPHAFAAHPRLPAAQKRCLQRELVGLSEQ HHCCCCCCCCHHHCHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PEGQRLLRQLQLTPLTEAQDSDWNDIRRLKLRYQPPVER CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCCC >Mature Secondary Structure MNTKPLNRLASWIFLALACAAAPAPRAAPLLRVGVVPQQSALSLAQAWGPLLQYLGAQCA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHE MELRFETAPDIPAFEQRVAAGSYDLVYVNPLHYVQFHEKPGYLPLAREKDRKLVGLIVVR EEEEECCCCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEE GDSPVTEVRQLDGMDLALPAPEAFAASVLPRIELENMGVRARIHYVGSHDSVYLGVAQGL CCCCHHHHHHCCCCEEECCCCHHHHHHHCCCEEECCCCEEEEEEEECCCCCEEEEHHHHH FAAGGGINRTWQQQPEALRGKLRILWQTPPYTPHAFAAHPRLPAAQKRCLQRELVGLSEQ HHCCCCCCCCHHHCHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PEGQRLLRQLQLTPLTEAQDSDWNDIRRLKLRYQPPVER CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]