| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497257
Identifier: 34497257
GI number: 34497257
Start: 1957074
End: 1957583
Strand: Reverse
Name: 34497257
Synonym: CV_1802
Alternate gene names: NA
Gene position: 1957583-1957074 (Counterclockwise)
Preceding gene: 34497258
Following gene: 34497256
Centisome position: 41.2
GC content: 59.02
Gene sequence:
>510_bases CTGGCGCACAAAGGATCGGACACCATCGCACGCCACCAGCCAGTCGCAATGGATCTGATAGCCGCCCTGGTCGGTTGCGA TATCGACAATGGCGCGGCGCGGCTCGCGCTGAACGCCTGCAACGCGATGCCCCCAGCGGAATTCGACCAAGCCCGATGCC AGGCAGGCATCGATCAACCACTCCTCCAGATAGTACTGCTGAAGATTGATGAAGGCCGGGTACTGGTGCCCCGGCTCAGG CAGATAATTGAACTCGAACAACTGCCGGTCTCCGTGCAACACCTTGCCCAGATGCCAACTGACGCCTTTTTCCAACAGTT GCTCGCCCAAACCCAGCCGTCCCAGTATTTCCAGACTGCGCTTGGCAAAAACAATCGCACGCGATCCATCAGAAACCTTG TCATCCTGATCGACCACCAGCGTGCGCACCCCCCGCCTAGCCAGATCCAGAGCCAGCACCAGCCCCACCAACCCCGCACC AGCGATGACAATTCCCCTTTCAATCAATGA
Upstream 100 bases:
>100_bases ACCAAAAGCGGCGCTCCGCAGGCAAAGCGGCAGGCATGCGCACATCGGCGATCAGGAAGCGGTCATTGAACGTCCGTCCC TCGAAAGGCAGCTGTAGCGC
Downstream 100 bases:
>100_bases ATTGCCATCAAATCTAGTGCGTTCAAAAGTACGACGTTTCACCACCATGACCTGCTCCCGCGGAAAAGTGACAAAGCCAT TCACCGCGGCGGAATTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAHKGSDTIARHQPVAMDLIAALVGCDIDNGAARLALNACNAMPPAEFDQARCQAGIDQPLLQIVLLKIDEGRVLVPRLR QIIELEQLPVSVQHLAQMPTDAFFQQLLAQTQPSQYFQTALGKNNRTRSIRNLVILIDHQRAHPPPSQIQSQHQPHQPRT SDDNSPFNQ
Sequences:
>Translated_169_residues MAHKGSDTIARHQPVAMDLIAALVGCDIDNGAARLALNACNAMPPAEFDQARCQAGIDQPLLQIVLLKIDEGRVLVPRLR QIIELEQLPVSVQHLAQMPTDAFFQQLLAQTQPSQYFQTALGKNNRTRSIRNLVILIDHQRAHPPPSQIQSQHQPHQPRT SDDNSPFNQ >Mature_168_residues AHKGSDTIARHQPVAMDLIAALVGCDIDNGAARLALNACNAMPPAEFDQARCQAGIDQPLLQIVLLKIDEGRVLVPRLRQ IIELEQLPVSVQHLAQMPTDAFFQQLLAQTQPSQYFQTALGKNNRTRSIRNLVILIDHQRAHPPPSQIQSQHQPHQPRTS DDNSPFNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18801; Mature: 18670
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHKGSDTIARHQPVAMDLIAALVGCDIDNGAARLALNACNAMPPAEFDQARCQAGIDQP CCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCHH LLQIVLLKIDEGRVLVPRLRQIIELEQLPVSVQHLAQMPTDAFFQQLLAQTQPSQYFQTA HHHHHHHHCCCCCEEHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH LGKNNRTRSIRNLVILIDHQRAHPPPSQIQSQHQPHQPRTSDDNSPFNQ HCCCCCHHHHCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AHKGSDTIARHQPVAMDLIAALVGCDIDNGAARLALNACNAMPPAEFDQARCQAGIDQP CCCCCCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCHH LLQIVLLKIDEGRVLVPRLRQIIELEQLPVSVQHLAQMPTDAFFQQLLAQTQPSQYFQTA HHHHHHHHCCCCCEEHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH LGKNNRTRSIRNLVILIDHQRAHPPPSQIQSQHQPHQPRTSDDNSPFNQ HCCCCCHHHHCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA