| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497258
Identifier: 34497258
GI number: 34497258
Start: 1957710
End: 1958582
Strand: Reverse
Name: 34497258
Synonym: CV_1803
Alternate gene names: NA
Gene position: 1958582-1957710 (Counterclockwise)
Preceding gene: 34497265
Following gene: 34497257
Centisome position: 41.22
GC content: 65.29
Gene sequence:
>873_bases ATGCTGGTCGGGGCGGATCAGATAAACGCGGCGTTGCGCCGCTCGGTAACGCTCATGGGCCAGCCCGGCGTCATCGACAA CATGAATGCGGCCATCGCCGCCTTCGCTTCCCGAACGGCCCACCGTCAACAGCGCCGCGCCGTGCAGGCGGCAGAAATGC CACGCGGCATCCACGTCGGACTCGCCATCGACGAAATACAGCAAAGTGAAGCGGTTGCCGATGCGCTCCAGCAGCCAGGC GGGTTGGCCCGCCAGCGACACCGGCGCGTCCAGAGCGGCATCGCCCGGCCCCGGTCCTTCCCGATGTCCGGCAGGCTGCA GCAAGCTGCAACCCGCCAGCGACGCCGGCCGCGACAACCGTCCGGAATTGACCATGGGGCGGATGGCCTCCTGCTCGGCG GACAACAGCAGCACAGCCTCCTTGAGCAGCCTGGCGCGCTCCGAACGCGGCGTAATGAAGTCAGCGCTGCGGCTGGAGTT GAGAATATTCTCGTCAGCCGCCAGACCACGCTCCTCGCCGTAACTGTCCAGCAAAGCCGGCCCCGCCCGTCCTGTAATGA TTTCAGCCAGCTTCCAACCCAAGTTGTCAGCGTCCTGAATGCCGCCATTTCCGCCGCGGCCGCCGAAAGGGCTAACCTCA TGCGCGCTGTCTCCGGCGAACACCACCGGTCCATGCACGAAGCGAGCCAGCCGGCGGCAACGGAAGGTATAGACGCTGAC CCATTCAAGTTCGAAATCGATATCGTCGCCGAACATCCTGCGCAGCCTGGCCGCCACGCGCTCCGGCTCGCGCTCCAGCA CTGGGTCTGCATCCGGCCCCAGCTGGAAATCGACGCGCCAGACATCATCAGGCTGTTTGTGGATCAGGACTGA
Upstream 100 bases:
>100_bases AGGCGCGCCTTTCGAAAGTGGAGGAAACGGAGTGGCCCAAAGCCAGCCGCAGAGCCGCGGCCAGCTCGACCGGGTCAAGC AGGTCGGCGGCATAGCAGAT
Downstream 100 bases:
>100_bases CTGCCCCTCATGGAAGGATGGCGAGAACCAAAAGCGGCGCTCCGCAGGCAAAGCGGCAGGCATGCGCACATCGGCGATCA GGAAGCGGTCATTGAACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLVGADQINAALRRSVTLMGQPGVIDNMNAAIAAFASRTAHRQQRRAVQAAEMPRGIHVGLAIDEIQQSEAVADALQQPG GLARQRHRRVQSGIARPRSFPMSGRLQQAATRQRRRPRQPSGIDHGADGLLLGGQQQHSLLEQPGALRTRRNEVSAAAGV ENILVSRQTTLLAVTVQQSRPRPSCNDFSQLPTQVVSVLNAAISAAAAERANLMRAVSGEHHRSMHEASQPAATEGIDAD PFKFEIDIVAEHPAQPGRHALRLALQHWVCIRPQLEIDAPDIIRLFVDQD
Sequences:
>Translated_290_residues MLVGADQINAALRRSVTLMGQPGVIDNMNAAIAAFASRTAHRQQRRAVQAAEMPRGIHVGLAIDEIQQSEAVADALQQPG GLARQRHRRVQSGIARPRSFPMSGRLQQAATRQRRRPRQPSGIDHGADGLLLGGQQQHSLLEQPGALRTRRNEVSAAAGV ENILVSRQTTLLAVTVQQSRPRPSCNDFSQLPTQVVSVLNAAISAAAAERANLMRAVSGEHHRSMHEASQPAATEGIDAD PFKFEIDIVAEHPAQPGRHALRLALQHWVCIRPQLEIDAPDIIRLFVDQD >Mature_290_residues MLVGADQINAALRRSVTLMGQPGVIDNMNAAIAAFASRTAHRQQRRAVQAAEMPRGIHVGLAIDEIQQSEAVADALQQPG GLARQRHRRVQSGIARPRSFPMSGRLQQAATRQRRRPRQPSGIDHGADGLLLGGQQQHSLLEQPGALRTRRNEVSAAAGV ENILVSRQTTLLAVTVQQSRPRPSCNDFSQLPTQVVSVLNAAISAAAAERANLMRAVSGEHHRSMHEASQPAATEGIDAD PFKFEIDIVAEHPAQPGRHALRLALQHWVCIRPQLEIDAPDIIRLFVDQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31557; Mature: 31557
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGADQINAALRRSVTLMGQPGVIDNMNAAIAAFASRTAHRQQRRAVQAAEMPRGIHVG CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LAIDEIQQSEAVADALQQPGGLARQRHRRVQSGIARPRSFPMSGRLQQAATRQRRRPRQP EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC SGIDHGADGLLLGGQQQHSLLEQPGALRTRRNEVSAAAGVENILVSRQTTLLAVTVQQSR CCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC PRPSCNDFSQLPTQVVSVLNAAISAAAAERANLMRAVSGEHHRSMHEASQPAATEGIDAD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC PFKFEIDIVAEHPAQPGRHALRLALQHWVCIRPQLEIDAPDIIRLFVDQD CEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCC >Mature Secondary Structure MLVGADQINAALRRSVTLMGQPGVIDNMNAAIAAFASRTAHRQQRRAVQAAEMPRGIHVG CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LAIDEIQQSEAVADALQQPGGLARQRHRRVQSGIARPRSFPMSGRLQQAATRQRRRPRQP EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC SGIDHGADGLLLGGQQQHSLLEQPGALRTRRNEVSAAAGVENILVSRQTTLLAVTVQQSR CCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC PRPSCNDFSQLPTQVVSVLNAAISAAAAERANLMRAVSGEHHRSMHEASQPAATEGIDAD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC PFKFEIDIVAEHPAQPGRHALRLALQHWVCIRPQLEIDAPDIIRLFVDQD CEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA