| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497256
Identifier: 34497256
GI number: 34497256
Start: 1955476
End: 1956621
Strand: Reverse
Name: 34497256
Synonym: CV_1801
Alternate gene names: NA
Gene position: 1956621-1955476 (Counterclockwise)
Preceding gene: 34497257
Following gene: 34497255
Centisome position: 41.18
GC content: 62.22
Gene sequence:
>1146_bases ATGAACCTGTCGCGACGCGCGTTTCTGGAACATAGCCTGCTGTATGCAGCGCTGGCCCCCTTCGCTTCGCAAGCGGCCCA GGCCGAAGGAATGAAGCCTCGAGCCTTCTCCAACACGCAAGGATCCAACATGAAGCTGTCCCGCAACGAATACGACTACC GTCCGCCGCGCCTGCAAGACCTGCAGACAGCAAGCGACCCTCTGATCGTCTTGTGCACCCTGCTCGCCCGGGCCGACAAC TCGCCGCTCAGCGAGCGACGGCGCGACCCCGGCTTTCTGATCGACCGCGACGGCCAATCCATCCAGGATCCGGCTGGCCA CGATCAACGCCCCGCTTTCGATAGCCCGGTCAACGTATCGTTTGAAAAATGGGGTGAGTATTGGCGAAAAGTGCATGGCC CGCGCTTCCTGTATGCTCAAAAACCGCAGGATGGCGGCATCCAGCGCATGGTGCGCTACGATCAGGTGCACCGCCTCGCT TTCGGCCCGAGCAAGGGCAGCCCGCTGCCGTACCTCCCGCCCGTCGACAATGACGGCGAGCTGTTCCATACGGTGGTAGA CCACGTGCCGGCATACCGTCGCCCAGACTGGGACGGCATCGCCTACCTGGGATTCAAAAGCACCGACGACATGGGCGCCG TCTTCTCCCAACCCAGCCTCGCCGCCACCATCATCCCGGAAGACAAGGCCATCTTCCGCGAATTGGCCCCGGTTTTGTCC CGCCAGCACATCATCATTCCCAGCGCGACTCAGCGAGACCCCATCCTGCTGGTCAAAACCCACCAGCGCCGCGCCGGCTT GAGCCGTCAGGAATTCCAGCATCAATGGCTGGCCGAGCACGCCGACCTGGTTCGCACCACACCCGCCACCGCGCGTTATG TCCGCCGCTACGTCCAGTTGCACGCGATCGGCCCGGAACAGGAAGGCCAACCGTTCTGGCACCCCGCCAGCAGCAAGATA GACGGCGTGACCTTGATGGCTTTTTCCAGCCTGAACGATCTGGAGGACTTCATGTTGAGCGAAGACTATCAGGCCATTGA ACGCGACGAACAGCGCTTCGCCGATGCGGAACGCTCGGACTTCTGGACCGCGATGGGGATCAATGTAGTGAACCGCATCC AACAGGAAGTCGCCACCCCGCGCTAA
Upstream 100 bases:
>100_bases TATTTGAAGGTCATAAAGACCGGGCTGAAAACACCCTTTGGCATGACCGCCTCACCCCATCCGGCACGCTCCACTCGGTG GCCAACGGAGGGGATGGCGC
Downstream 100 bases:
>100_bases GCCAGATGTCCCGCCATCGGCGGACAACCGACTGCGATGCGCCCGAGCCGGCAGGCCGGGCGCATCCCGCCCTTCACGCA CCAGGCAATCACGAGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNLSRRAFLEHSLLYAALAPFASQAAQAEGMKPRAFSNTQGSNMKLSRNEYDYRPPRLQDLQTASDPLIVLCTLLARADN SPLSERRRDPGFLIDRDGQSIQDPAGHDQRPAFDSPVNVSFEKWGEYWRKVHGPRFLYAQKPQDGGIQRMVRYDQVHRLA FGPSKGSPLPYLPPVDNDGELFHTVVDHVPAYRRPDWDGIAYLGFKSTDDMGAVFSQPSLAATIIPEDKAIFRELAPVLS RQHIIIPSATQRDPILLVKTHQRRAGLSRQEFQHQWLAEHADLVRTTPATARYVRRYVQLHAIGPEQEGQPFWHPASSKI DGVTLMAFSSLNDLEDFMLSEDYQAIERDEQRFADAERSDFWTAMGINVVNRIQQEVATPR
Sequences:
>Translated_381_residues MNLSRRAFLEHSLLYAALAPFASQAAQAEGMKPRAFSNTQGSNMKLSRNEYDYRPPRLQDLQTASDPLIVLCTLLARADN SPLSERRRDPGFLIDRDGQSIQDPAGHDQRPAFDSPVNVSFEKWGEYWRKVHGPRFLYAQKPQDGGIQRMVRYDQVHRLA FGPSKGSPLPYLPPVDNDGELFHTVVDHVPAYRRPDWDGIAYLGFKSTDDMGAVFSQPSLAATIIPEDKAIFRELAPVLS RQHIIIPSATQRDPILLVKTHQRRAGLSRQEFQHQWLAEHADLVRTTPATARYVRRYVQLHAIGPEQEGQPFWHPASSKI DGVTLMAFSSLNDLEDFMLSEDYQAIERDEQRFADAERSDFWTAMGINVVNRIQQEVATPR >Mature_381_residues MNLSRRAFLEHSLLYAALAPFASQAAQAEGMKPRAFSNTQGSNMKLSRNEYDYRPPRLQDLQTASDPLIVLCTLLARADN SPLSERRRDPGFLIDRDGQSIQDPAGHDQRPAFDSPVNVSFEKWGEYWRKVHGPRFLYAQKPQDGGIQRMVRYDQVHRLA FGPSKGSPLPYLPPVDNDGELFHTVVDHVPAYRRPDWDGIAYLGFKSTDDMGAVFSQPSLAATIIPEDKAIFRELAPVLS RQHIIIPSATQRDPILLVKTHQRRAGLSRQEFQHQWLAEHADLVRTTPATARYVRRYVQLHAIGPEQEGQPFWHPASSKI DGVTLMAFSSLNDLEDFMLSEDYQAIERDEQRFADAERSDFWTAMGINVVNRIQQEVATPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43304; Mature: 43304
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSRRAFLEHSLLYAALAPFASQAAQAEGMKPRAFSNTQGSNMKLSRNEYDYRPPRLQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHH LQTASDPLIVLCTLLARADNSPLSERRRDPGFLIDRDGQSIQDPAGHDQRPAFDSPVNVS HHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC FEKWGEYWRKVHGPRFLYAQKPQDGGIQRMVRYDQVHRLAFGPSKGSPLPYLPPVDNDGE HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH LFHTVVDHVPAYRRPDWDGIAYLGFKSTDDMGAVFSQPSLAATIIPEDKAIFRELAPVLS HHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHC RQHIIIPSATQRDPILLVKTHQRRAGLSRQEFQHQWLAEHADLVRTTPATARYVRRYVQL CCEEEECCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HAIGPEQEGQPFWHPASSKIDGVTLMAFSSLNDLEDFMLSEDYQAIERDEQRFADAERSD HCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FWTAMGINVVNRIQQEVATPR HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLSRRAFLEHSLLYAALAPFASQAAQAEGMKPRAFSNTQGSNMKLSRNEYDYRPPRLQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHH LQTASDPLIVLCTLLARADNSPLSERRRDPGFLIDRDGQSIQDPAGHDQRPAFDSPVNVS HHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC FEKWGEYWRKVHGPRFLYAQKPQDGGIQRMVRYDQVHRLAFGPSKGSPLPYLPPVDNDGE HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH LFHTVVDHVPAYRRPDWDGIAYLGFKSTDDMGAVFSQPSLAATIIPEDKAIFRELAPVLS HHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHC RQHIIIPSATQRDPILLVKTHQRRAGLSRQEFQHQWLAEHADLVRTTPATARYVRRYVQL CCEEEECCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HAIGPEQEGQPFWHPASSKIDGVTLMAFSSLNDLEDFMLSEDYQAIERDEQRFADAERSD HCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FWTAMGINVVNRIQQEVATPR HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA