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The map label for this gene is bdlA [H]

Identifier: 34496909

GI number: 34496909

Start: 1541910

End: 1543244

Strand: Reverse

Name: bdlA [H]

Synonym: CV_1454

Alternate gene names: 34496909

Gene position: 1543244-1541910 (Counterclockwise)

Preceding gene: 34496910

Following gene: 34496907

Centisome position: 32.48

GC content: 60.37

Gene sequence:

>1335_bases
ATGTTCGATCAAAAGCTGAAATCCTCCTTGAATGACGCCCTGGCTCAACTGGAAAATCAAAAAAACGTGCTGGACGCGCT
GAACCAATCGACCGCCATCATAGAATTCAGCCCGGACGGCATCATCCTCTCCGCCAACGCCAATTTCGAGCAGACCCTGG
GCTACAGCGCCGAGGAAATCATCGGCCAGCACCATAGCATGTTTTGCCTGCCGCAATTCACGGCCAGCCAGGAATACAAG
GCCTTTTGGCATGTGTTGCGGACCGGGGGCATCATCAAGGATCAGTTCCGGCGCATCGCCAAGGATGGTCGCACCGTATG
GCTGGAGGCCAGCTACAACCCGGTCCACGACAAACAGGGCCAGGTGGTCAAAGTGATGGTGTTCGCGCTGGACGTCACCC
AGGAGGTCAAGCTCGCCCATGAGGCGAGAAACATCATGAAAGCCGTTGAGCGCTCAATGGCCGTCATCGAGTTCACCCCG
GAAGGCGTCATCCTGACCGCCAACGCCAATTTTCTCGGCGCCACCGGCTATACCGCCGAGGAAATCATCGGCAAGCACCA
CCGCATCTTCTGCCCAGCCGACTTTGTGCACAGCCCCGCCTATGAGCATCTGTGGCAACAGCTGAAACAGGGCGTGTTCG
TCTCCGGCAGGTTCGAACGCCTGCATAAATCGGGCCGCCCGATTTGGCTGGAGGCCAGCTACAATCCGATCTTCGACGAC
GATGGCGTGGTGTTCAAGGTCATCAAGTTCGCCACCGACATCACCGACCAGGAAACCGCGCGCCAGCAAGATCTCCGCCT
GGTGCAGGAAGCGCATCGGCTGTCGGCGGCGTCGGACAACGCCTCCAGCAACGGCCAGCAGGTGATCCGCGACACCATCC
AGGCGATGAGCGTGATCGCCGACAGCGCGGGACAGTCGGCGCGGCTGATCGAAGACCTGGAACAGAAAACCAGCCGCATC
ACCACCATCGTCAACACCATCCATGAAATCGCCGATCAGACCAATCTGCTGGCGTTGAACGCGGCGATCGAAGCCGCCCG
CGCCGGCGAGCAGGGCCGCGGCTTCGCCGTGGTGGCCGACGAGGTGCGCAAACTGGCGGAACGCACCAGCACCTCCACCA
AGGAGGTGACCGAGATGATAGACGACATCAAGAACGGCACCGGCAGCGCCACCGAAAGCATCCACGAAATGCTGGTGAAG
GCGCAGAAAGGCGAGGAACACGCCAGCGAGGCCAGCAGTTCGATCGAGCAGATACGCAACAGCACCTCGCGGCTGGCCGA
TGTGGTCAACCACTTCTCAGCCGTTCAAGCCGGCGCCAATCCCCCCAATCCCTGA

Upstream 100 bases:

>100_bases
CAGACTCTCCTTGACTAATCTCACCCATATTTCATACACCAAATAAGCGATATCGCGCGCCTTGCATTCCCGACCATCCC
TATCCCGCGAGGATGAAACG

Downstream 100 bases:

>100_bases
GCGCCAGCGCGCTGGCTGGCGCGTTTTTCGGCAAAGGATCACGCCCCTCCCCTCAGCATCCTGACGCCCGCGTAAGCGAA
AGCCAGCGCCAGCGCGCCAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MFDQKLKSSLNDALAQLENQKNVLDALNQSTAIIEFSPDGIILSANANFEQTLGYSAEEIIGQHHSMFCLPQFTASQEYK
AFWHVLRTGGIIKDQFRRIAKDGRTVWLEASYNPVHDKQGQVVKVMVFALDVTQEVKLAHEARNIMKAVERSMAVIEFTP
EGVILTANANFLGATGYTAEEIIGKHHRIFCPADFVHSPAYEHLWQQLKQGVFVSGRFERLHKSGRPIWLEASYNPIFDD
DGVVFKVIKFATDITDQETARQQDLRLVQEAHRLSAASDNASSNGQQVIRDTIQAMSVIADSAGQSARLIEDLEQKTSRI
TTIVNTIHEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTSTSTKEVTEMIDDIKNGTGSATESIHEMLVK
AQKGEEHASEASSSIEQIRNSTSRLADVVNHFSAVQAGANPPNP

Sequences:

>Translated_444_residues
MFDQKLKSSLNDALAQLENQKNVLDALNQSTAIIEFSPDGIILSANANFEQTLGYSAEEIIGQHHSMFCLPQFTASQEYK
AFWHVLRTGGIIKDQFRRIAKDGRTVWLEASYNPVHDKQGQVVKVMVFALDVTQEVKLAHEARNIMKAVERSMAVIEFTP
EGVILTANANFLGATGYTAEEIIGKHHRIFCPADFVHSPAYEHLWQQLKQGVFVSGRFERLHKSGRPIWLEASYNPIFDD
DGVVFKVIKFATDITDQETARQQDLRLVQEAHRLSAASDNASSNGQQVIRDTIQAMSVIADSAGQSARLIEDLEQKTSRI
TTIVNTIHEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTSTSTKEVTEMIDDIKNGTGSATESIHEMLVK
AQKGEEHASEASSSIEQIRNSTSRLADVVNHFSAVQAGANPPNP
>Mature_444_residues
MFDQKLKSSLNDALAQLENQKNVLDALNQSTAIIEFSPDGIILSANANFEQTLGYSAEEIIGQHHSMFCLPQFTASQEYK
AFWHVLRTGGIIKDQFRRIAKDGRTVWLEASYNPVHDKQGQVVKVMVFALDVTQEVKLAHEARNIMKAVERSMAVIEFTP
EGVILTANANFLGATGYTAEEIIGKHHRIFCPADFVHSPAYEHLWQQLKQGVFVSGRFERLHKSGRPIWLEASYNPIFDD
DGVVFKVIKFATDITDQETARQQDLRLVQEAHRLSAASDNASSNGQQVIRDTIQAMSVIADSAGQSARLIEDLEQKTSRI
TTIVNTIHEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTSTSTKEVTEMIDDIKNGTGSATESIHEMLVK
AQKGEEHASEASSSIEQIRNSTSRLADVVNHFSAVQAGANPPNP

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=157, Percent_Identity=38.8535031847134, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788195, Length=166, Percent_Identity=33.1325301204819, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI2367378, Length=114, Percent_Identity=42.9824561403509, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788194, Length=125, Percent_Identity=37.6, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1787690, Length=112, Percent_Identity=43.75, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 49011; Mature: 49011

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDQKLKSSLNDALAQLENQKNVLDALNQSTAIIEFSPDGIILSANANFEQTLGYSAEEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHCCCHHHH
IGQHHSMFCLPQFTASQEYKAFWHVLRTGGIIKDQFRRIAKDGRTVWLEASYNPVHDKQG
HCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC
QVVKVMVFALDVTQEVKLAHEARNIMKAVERSMAVIEFTPEGVILTANANFLGATGYTAE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCEECCCCCCHH
EIIGKHHRIFCPADFVHSPAYEHLWQQLKQGVFVSGRFERLHKSGRPIWLEASYNPIFDD
HHHCCCCEEECCHHHHCCCHHHHHHHHHHCCCEECHHHHHHHHCCCCEEEEECCCCCCCC
DGVVFKVIKFATDITDQETARQQDLRLVQEAHRLSAASDNASSNGQQVIRDTIQAMSVIA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DSAGQSARLIEDLEQKTSRITTIVNTIHEIADQTNLLALNAAIEAARAGEQGRGFAVVAD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEHHH
EVRKLAERTSTSTKEVTEMIDDIKNGTGSATESIHEMLVKAQKGEEHASEASSSIEQIRN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
STSRLADVVNHFSAVQAGANPPNP
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFDQKLKSSLNDALAQLENQKNVLDALNQSTAIIEFSPDGIILSANANFEQTLGYSAEEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHHHHCCCHHHH
IGQHHSMFCLPQFTASQEYKAFWHVLRTGGIIKDQFRRIAKDGRTVWLEASYNPVHDKQG
HCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC
QVVKVMVFALDVTQEVKLAHEARNIMKAVERSMAVIEFTPEGVILTANANFLGATGYTAE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCEECCCCCCHH
EIIGKHHRIFCPADFVHSPAYEHLWQQLKQGVFVSGRFERLHKSGRPIWLEASYNPIFDD
HHHCCCCEEECCHHHHCCCHHHHHHHHHHCCCEECHHHHHHHHCCCCEEEEECCCCCCCC
DGVVFKVIKFATDITDQETARQQDLRLVQEAHRLSAASDNASSNGQQVIRDTIQAMSVIA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DSAGQSARLIEDLEQKTSRITTIVNTIHEIADQTNLLALNAAIEAARAGEQGRGFAVVAD
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEHHH
EVRKLAERTSTSTKEVTEMIDDIKNGTGSATESIHEMLVKAQKGEEHASEASSSIEQIRN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
STSRLADVVNHFSAVQAGANPPNP
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]