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The map label for this gene is ychE [H]

Identifier: 34496910

GI number: 34496910

Start: 1543504

End: 1544133

Strand: Reverse

Name: ychE [H]

Synonym: CV_1455

Alternate gene names: 34496910

Gene position: 1544133-1543504 (Counterclockwise)

Preceding gene: 34496911

Following gene: 34496909

Centisome position: 32.5

GC content: 63.02

Gene sequence:

>630_bases
ATGGAAATCGAAATCGCAAAAATCTTCATCGCGCTGCTGGTGCTGGTCAATCCGCTTGGCGCCATCCCCATCTTCATCAG
CTTGACGCCCAACGCCGGCCAGGAGGAAAGGCGGAAAATCGCCAAGACCACCGCCATCGCCGTCGCCATCGTGCTCAGCC
TGTTCGCGGTGGTGGGCGAGACGCTGCTGCGCTTTCTGGGCATCAGCATAGGCTCGTTCCAAGTCGGCGGCGGCATCCTG
GTGATGCTGATCGCCATCGCGCTGATGAACGCCAAGCCCGGTCCGACCAAGACCACCAAGCAGGAACGCGAGGAGGCGGG
CCACAAGACCAATATCGCGGTGGTGCCGATGGCCATCCCGCTGATGACCGGCCCGGGCACCATCTCCACGGTGATCATCT
ACGCCAGCACCGCCCACTCCTGGATACAGGTGGTCTACCTGCTGATCAGCGGCCTCCTGGTGGCCGTCACCTGCTACGGC
GCGCTGGTGCTGGCCTCGCCGCTGTCCCGGCTGCTGGGCCAGACCGGGATCAATATCGTCAACCGGGTGATGGGCATGCT
GCTCGCCGCGGTATCGGTGGAAATCATCGTCGACGGCGTTTACCGGCTGTTTCCGCAACTGACTCGCTGA

Upstream 100 bases:

>100_bases
CGGTTTTTTCACATCCACGCCGCGTCCCTGGCGCAACCATGGTTTTTCGCGTCTCCACGCCGAATGTTGCGGATCGAACT
AACAGGTAAGCTCCATCATC

Downstream 100 bases:

>100_bases
AGGCTCGCGGCGCCGCTGCGGGCCCTCCCCGGCCGGCGCGGCCGCCATTTCACGCCTCCTCCGAACAATCTGGACTGGCC
ATCGCCGCCCGAGCGTCTGC

Product: multiple antibiotic resistance protein MarC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEIEIAKIFIALLVLVNPLGAIPIFISLTPNAGQEERRKIAKTTAIAVAIVLSLFAVVGETLLRFLGISIGSFQVGGGIL
VMLIAIALMNAKPGPTKTTKQEREEAGHKTNIAVVPMAIPLMTGPGTISTVIIYASTAHSWIQVVYLLISGLLVAVTCYG
ALVLASPLSRLLGQTGINIVNRVMGMLLAAVSVEIIVDGVYRLFPQLTR

Sequences:

>Translated_209_residues
MEIEIAKIFIALLVLVNPLGAIPIFISLTPNAGQEERRKIAKTTAIAVAIVLSLFAVVGETLLRFLGISIGSFQVGGGIL
VMLIAIALMNAKPGPTKTTKQEREEAGHKTNIAVVPMAIPLMTGPGTISTVIIYASTAHSWIQVVYLLISGLLVAVTCYG
ALVLASPLSRLLGQTGINIVNRVMGMLLAAVSVEIIVDGVYRLFPQLTR
>Mature_209_residues
MEIEIAKIFIALLVLVNPLGAIPIFISLTPNAGQEERRKIAKTTAIAVAIVLSLFAVVGETLLRFLGISIGSFQVGGGIL
VMLIAIALMNAKPGPTKTTKQEREEAGHKTNIAVVPMAIPLMTGPGTISTVIIYASTAHSWIQVVYLLISGLLVAVTCYG
ALVLASPLSRLLGQTGINIVNRVMGMLLAAVSVEIIVDGVYRLFPQLTR

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=201, Percent_Identity=43.2835820895522, Blast_Score=170, Evalue=6e-44,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=30.9278350515464, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1789842, Length=197, Percent_Identity=29.9492385786802, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22128; Mature: 22128

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEIAKIFIALLVLVNPLGAIPIFISLTPNAGQEERRKIAKTTAIAVAIVLSLFAVVGE
CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLRFLGISIGSFQVGGGILVMLIAIALMNAKPGPTKTTKQEREEAGHKTNIAVVPMAIP
HHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEHEEE
LMTGPGTISTVIIYASTAHSWIQVVYLLISGLLVAVTCYGALVLASPLSRLLGQTGINIV
EECCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NRVMGMLLAAVSVEIIVDGVYRLFPQLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIEIAKIFIALLVLVNPLGAIPIFISLTPNAGQEERRKIAKTTAIAVAIVLSLFAVVGE
CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLRFLGISIGSFQVGGGILVMLIAIALMNAKPGPTKTTKQEREEAGHKTNIAVVPMAIP
HHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEHEEE
LMTGPGTISTVIIYASTAHSWIQVVYLLISGLLVAVTCYGALVLASPLSRLLGQTGINIV
EECCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NRVMGMLLAAVSVEIIVDGVYRLFPQLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]