Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is fixG [H]

Identifier: 34496907

GI number: 34496907

Start: 1539682

End: 1541088

Strand: Reverse

Name: fixG [H]

Synonym: CV_1452

Alternate gene names: 34496907

Gene position: 1541088-1539682 (Counterclockwise)

Preceding gene: 34496909

Following gene: 34496906

Centisome position: 32.44

GC content: 63.61

Gene sequence:

>1407_bases
TTGTTTGTACTGATCCCCAGCAGTAAAAATAGCCATCTTCATAGCGTGGTGGCAGCCATGTCCAAGCCTGAAATCAAACC
CGTCCCCATCAAGATCCATCCCCGGCTCACCAGCGGCCGCTTCAACAATGTCCGCGTCGGCATGGTGGTGCTGACGCAGC
TGGCGTTCTTCGGCATGCCCTGGCTGCTGTGGAACGGCCGCCAGGCGGTGCATTTCAATCTGGCGGAGCATCATTTCCTG
ATCTTCGGCATCAGCCTGTGGCCGCAGGATTTCATCTACCTGGCGGCGCTGCTGGTGGTATCGGCGCTGGGCCTGTTCCT
GTGGACCACGCTGGCCGGCCGGCTGTGGTGCGGCTACAGCTGCCCGCAAACGGTGTATACCCAGATCATGATCTGGATCG
AACGGGCGATTCAGGGCGACCACAACGCCCGCCGCAAGCTGGACGCCGCGCCGATGAGCGTCGGCAAGTTCGCCAAGAAA
GGCGCCACCCAGGCGATCATGGCCGCGTTCTCCTTGTGGACCGGCCTCACCTTCGTCGGCTACTTCACGCCGATGCGCGA
GCTGGCCACGCTGCAGATGGGGCCATGGGATCTGTTCTGGACGCTGTTCTACGGCGGCTTCACCTGGCTGATGGCCGGCG
TGCTGCGCGAGAAGGTCTGTTTGCACATGTGCCCGTACGCGCGCTTCCAGGGTTCGATGTTCGACGACCACACCCTGGTC
ATTTCCTATGACGCCAAGCGCGGCGAGCCGCGCGGCAAGACCCAGGCCAAGAGCGACGCCCAGACCAAGGGTTGCATAGA
TTGCGGCATCTGCGTGCAGGTCTGCCCCACCGGCATCGACATCCGCAACGGCCTGCAGTACGAATGCATAGGCTGCGCCG
CCTGTATCGACGCCTGCGACCAGGTGATGGACAAGCTGAAGTCGCCGCGCGGGCTGATCCGCTACACCAGCGCCCAGGCG
CTGCAGGGCAAGCCGGCGCAGAGCGGCCCGTCCTTCCACCGCCCGCGCATCGTCATCTACTCCTGCCTCTTGGCCGGCAT
CATCACCATGTCCACCACCGCGCTGGTGTTGAAGAAGCCGTTCAAGGTGGACGTGCTGCGCGACCGCGCCAGCCTGGTGG
AGCAATCCGACGACGGCCTGCTGCAGAACCGCTACAGCCTGCGGGTGATCAACACCACCGAGCAGGCGCAGCGCTACGTG
GTATCGGTCGAGGGCCTGCCCGGCATCCGCATGGAGAAGCCGGGCCAGGTAATCGAGGTCAAGCCGGCCCAGACCGAAAC
CGTGCCGGTGCGCGTGCAGGTCGAGCCGGAAAGCGCGCCGCGCGGCTCGCATCGCATCCACTTCGTGATACGCTCGCTGA
ACGATGACGTTTCGATAAGGGAAAAATCCAGCTTCATCGGCGAGTAA

Upstream 100 bases:

>100_bases
CGGCATTCTCCAGCAATCACGGGACATTATGCCAAAACGCTATCCATTCCTGTAAATATACAGCGGCATCTGTACTGATA
TTTTCATCATTGTCTGTTCA

Downstream 100 bases:

>100_bases
GCCGGGTCAGGAAAACAATATATGAACAAAACCGGCCAATTGAGCCAACGCTTCCGCCATGCGATAGAACAGGGCCATCT
GCGCGCCGGCGACCGCATGC

Product: iron-sulfur 4Fe-4S ferredoxin transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MFVLIPSSKNSHLHSVVAAMSKPEIKPVPIKIHPRLTSGRFNNVRVGMVVLTQLAFFGMPWLLWNGRQAVHFNLAEHHFL
IFGISLWPQDFIYLAALLVVSALGLFLWTTLAGRLWCGYSCPQTVYTQIMIWIERAIQGDHNARRKLDAAPMSVGKFAKK
GATQAIMAAFSLWTGLTFVGYFTPMRELATLQMGPWDLFWTLFYGGFTWLMAGVLREKVCLHMCPYARFQGSMFDDHTLV
ISYDAKRGEPRGKTQAKSDAQTKGCIDCGICVQVCPTGIDIRNGLQYECIGCAACIDACDQVMDKLKSPRGLIRYTSAQA
LQGKPAQSGPSFHRPRIVIYSCLLAGIITMSTTALVLKKPFKVDVLRDRASLVEQSDDGLLQNRYSLRVINTTEQAQRYV
VSVEGLPGIRMEKPGQVIEVKPAQTETVPVRVQVEPESAPRGSHRIHFVIRSLNDDVSIREKSSFIGE

Sequences:

>Translated_468_residues
MFVLIPSSKNSHLHSVVAAMSKPEIKPVPIKIHPRLTSGRFNNVRVGMVVLTQLAFFGMPWLLWNGRQAVHFNLAEHHFL
IFGISLWPQDFIYLAALLVVSALGLFLWTTLAGRLWCGYSCPQTVYTQIMIWIERAIQGDHNARRKLDAAPMSVGKFAKK
GATQAIMAAFSLWTGLTFVGYFTPMRELATLQMGPWDLFWTLFYGGFTWLMAGVLREKVCLHMCPYARFQGSMFDDHTLV
ISYDAKRGEPRGKTQAKSDAQTKGCIDCGICVQVCPTGIDIRNGLQYECIGCAACIDACDQVMDKLKSPRGLIRYTSAQA
LQGKPAQSGPSFHRPRIVIYSCLLAGIITMSTTALVLKKPFKVDVLRDRASLVEQSDDGLLQNRYSLRVINTTEQAQRYV
VSVEGLPGIRMEKPGQVIEVKPAQTETVPVRVQVEPESAPRGSHRIHFVIRSLNDDVSIREKSSFIGE
>Mature_468_residues
MFVLIPSSKNSHLHSVVAAMSKPEIKPVPIKIHPRLTSGRFNNVRVGMVVLTQLAFFGMPWLLWNGRQAVHFNLAEHHFL
IFGISLWPQDFIYLAALLVVSALGLFLWTTLAGRLWCGYSCPQTVYTQIMIWIERAIQGDHNARRKLDAAPMSVGKFAKK
GATQAIMAAFSLWTGLTFVGYFTPMRELATLQMGPWDLFWTLFYGGFTWLMAGVLREKVCLHMCPYARFQGSMFDDHTLV
ISYDAKRGEPRGKTQAKSDAQTKGCIDCGICVQVCPTGIDIRNGLQYECIGCAACIDACDQVMDKLKSPRGLIRYTSAQA
LQGKPAQSGPSFHRPRIVIYSCLLAGIITMSTTALVLKKPFKVDVLRDRASLVEQSDDGLLQNRYSLRVINTTEQAQRYV
VSVEGLPGIRMEKPGQVIEVKPAQTETVPVRVQVEPESAPRGSHRIHFVIRSLNDDVSIREKSSFIGE

Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR012285
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52257; Mature: 52257

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVLIPSSKNSHLHSVVAAMSKPEIKPVPIKIHPRLTSGRFNNVRVGMVVLTQLAFFGMP
CEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHCCC
WLLWNGRQAVHFNLAEHHFLIFGISLWPQDFIYLAALLVVSALGLFLWTTLAGRLWCGYS
EEEECCCEEEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
CPQTVYTQIMIWIERAIQGDHNARRKLDAAPMSVGKFAKKGATQAIMAAFSLWTGLTFVG
CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YFTPMRELATLQMGPWDLFWTLFYGGFTWLMAGVLREKVCLHMCPYARFQGSMFDDHTLV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEE
ISYDAKRGEPRGKTQAKSDAQTKGCIDCGICVQVCPTGIDIRNGLQYECIGCAACIDACD
EEECCCCCCCCCCCCCCCCCCCCCCEECCHHEEECCCCCCCCCCCCEEHHHHHHHHHHHH
QVMDKLKSPRGLIRYTSAQALQGKPAQSGPSFHRPRIVIYSCLLAGIITMSTTALVLKKP
HHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
FKVDVLRDRASLVEQSDDGLLQNRYSLRVINTTEQAQRYVVSVEGLPGIRMEKPGQVIEV
CEEEHHHHHHHHHHCCCCCHHHCCEEEEEECCHHHCCEEEEEECCCCCCCCCCCCCEEEE
KPAQTETVPVRVQVEPESAPRGSHRIHFVIRSLNDDVSIREKSSFIGE
CCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEHHHHCCCC
>Mature Secondary Structure
MFVLIPSSKNSHLHSVVAAMSKPEIKPVPIKIHPRLTSGRFNNVRVGMVVLTQLAFFGMP
CEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHCCC
WLLWNGRQAVHFNLAEHHFLIFGISLWPQDFIYLAALLVVSALGLFLWTTLAGRLWCGYS
EEEECCCEEEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
CPQTVYTQIMIWIERAIQGDHNARRKLDAAPMSVGKFAKKGATQAIMAAFSLWTGLTFVG
CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YFTPMRELATLQMGPWDLFWTLFYGGFTWLMAGVLREKVCLHMCPYARFQGSMFDDHTLV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEE
ISYDAKRGEPRGKTQAKSDAQTKGCIDCGICVQVCPTGIDIRNGLQYECIGCAACIDACD
EEECCCCCCCCCCCCCCCCCCCCCCEECCHHEEECCCCCCCCCCCCEEHHHHHHHHHHHH
QVMDKLKSPRGLIRYTSAQALQGKPAQSGPSFHRPRIVIYSCLLAGIITMSTTALVLKKP
HHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
FKVDVLRDRASLVEQSDDGLLQNRYSLRVINTTEQAQRYVVSVEGLPGIRMEKPGQVIEV
CEEEHHHHHHHHHHCCCCCHHHCCEEEEEECCHHHCCEEEEEECCCCCCCCCCCCCEEEE
KPAQTETVPVRVQVEPESAPRGSHRIHFVIRSLNDDVSIREKSSFIGE
CCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2536685; 11481432 [H]