| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pgsA [H]
Identifier: 34496761
GI number: 34496761
Start: 1376752
End: 1377333
Strand: Direct
Name: pgsA [H]
Synonym: CV_1306
Alternate gene names: 34496761
Gene position: 1376752-1377333 (Clockwise)
Preceding gene: 34496760
Following gene: 34496762
Centisome position: 28.98
GC content: 60.48
Gene sequence:
>582_bases ATGCCCTTCAATTTGCCGATATTACTGACCTGGCTCAGGGTCGCCCTGATCCCGATCTGCGTGGCGGTATTCTTCCTGCC GGACTCCATTCTGCTGCTGCATAGCCGCAACGCTGTGGGGGCCGGCATTTTCGCATTGGCGGCCGCCACCGACTGGCTGG ACGGCTACCTGGCGCGCAAGCTGGGGCAGACCTCGGCCTTCGGCGCCTTTCTCGACCCGGTGGCGGACAAGCTGATCGTG GCCGCGGCGCTGATCCTGCTGGTGCAATTGGGCCGCACCGAGGGTTGGATGGCGATGATCATCATCGGCCGCGAGATCAC CATTTCGGCGCTGCGCGAATGGATGGCGGGCATGGGCAGCCGCAGCAGCGTCGCCGTCGCCTATATCGGCAAGTTGAAGA CCGCTGCCCAGATGTTGGCGATCACGCTGCTGCTGTACGACGGCGCGCTTGTCCCGGGCCTGGATGCGCGCGGGTTGGGA AATTTTTCGATGTACGTTGCTGTCATATTGACTTTGTGGTCAATGATTTATTACCTGCAAATGGCGGCCAAGGAGTTCGC GGGTAAAAAAATAGACGTTTGA
Upstream 100 bases:
>100_bases GATCGTTGCATTGATACATGAAAGCGGCGGGTGCCCCTGATCCAGGCTCGGGGCGCCGGCCGGCGTTGTTGACGAGCCTG AAGCGACAAGACCAAGACCA
Downstream 100 bases:
>100_bases GGTGTTGACAGAACGAACAAATCTCTATAATTCGCAGTCTCTCGCCGCCGCTGACGAAGCAGCAGCGAGATCAAGCAAAG CGTTGTAGCAAGTTACGCAG
Product: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPFNLPILLTWLRVALIPICVAVFFLPDSILLLHSRNAVGAGIFALAAATDWLDGYLARKLGQTSAFGAFLDPVADKLIV AAALILLVQLGRTEGWMAMIIIGREITISALREWMAGMGSRSSVAVAYIGKLKTAAQMLAITLLLYDGALVPGLDARGLG NFSMYVAVILTLWSMIYYLQMAAKEFAGKKIDV
Sequences:
>Translated_193_residues MPFNLPILLTWLRVALIPICVAVFFLPDSILLLHSRNAVGAGIFALAAATDWLDGYLARKLGQTSAFGAFLDPVADKLIV AAALILLVQLGRTEGWMAMIIIGREITISALREWMAGMGSRSSVAVAYIGKLKTAAQMLAITLLLYDGALVPGLDARGLG NFSMYVAVILTLWSMIYYLQMAAKEFAGKKIDV >Mature_192_residues PFNLPILLTWLRVALIPICVAVFFLPDSILLLHSRNAVGAGIFALAAATDWLDGYLARKLGQTSAFGAFLDPVADKLIVA AALILLVQLGRTEGWMAMIIIGREITISALREWMAGMGSRSSVAVAYIGKLKTAAQMLAITLLLYDGALVPGLDARGLGN FSMYVAVILTLWSMIYYLQMAAKEFAGKKIDV
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=186, Percent_Identity=49.4623655913978, Blast_Score=157, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20835; Mature: 20704
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNLPILLTWLRVALIPICVAVFFLPDSILLLHSRNAVGAGIFALAAATDWLDGYLARK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LGQTSAFGAFLDPVADKLIVAAALILLVQLGRTEGWMAMIIIGREITISALREWMAGMGS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCC RSSVAVAYIGKLKTAAQMLAITLLLYDGALVPGLDARGLGNFSMYVAVILTLWSMIYYLQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MAAKEFAGKKIDV HHHHHHCCCCCCC >Mature Secondary Structure PFNLPILLTWLRVALIPICVAVFFLPDSILLLHSRNAVGAGIFALAAATDWLDGYLARK CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LGQTSAFGAFLDPVADKLIVAAALILLVQLGRTEGWMAMIIIGREITISALREWMAGMGS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCC RSSVAVAYIGKLKTAAQMLAITLLLYDGALVPGLDARGLGNFSMYVAVILTLWSMIYYLQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MAAKEFAGKKIDV HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]