Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is ybgO [C]

Identifier: 34496752

GI number: 34496752

Start: 1365748

End: 1366761

Strand: Direct

Name: ybgO [C]

Synonym: CV_1297

Alternate gene names: 34496752

Gene position: 1365748-1366761 (Clockwise)

Preceding gene: 34496751

Following gene: 34496756

Centisome position: 28.75

GC content: 60.75

Gene sequence:

>1014_bases
ATGAGGCCCGGAAAGGGCAGCCAGAGATACCGGGAAAGCGATAGGAATATGAAAAAACTGATTTGCCGAGGATTGCGGGG
ATGGCTGTTGGCCTTGCTGTTGGCCATGCCGCTGACCAGCCACGCGCTGGGCTGCTGGAATGGAAGCAACAGCTCCGGCA
ACGTCACGTCCACTTTCAACCTGCCCGGCAACTTGTTCGTCTCTGCCAACGCGCCGGTCGGAACCATCATCTGGCAATCG
TCATTGCAGAATCTCAGCCTGTATTGCTCGCAGAGCATAGGCGAAAACGTGTATTTCTGGGTGAATCCGAAGAGGGCGAC
GCTGGCGCCTGGGCTGCAGATCGGCATTATTTTCAATGGCCAGACCTATACCCAGAGCAGCGGCGCCATCGACACCGGCA
TTTACGTGCCGCGGGGAGGCTACGTCAATACCGTCCTGCAATACTCCATCGTGCTGCTGAAGACCGCGGGCGCGCCGTCC
AGCGGCTCTTCCTCGATCAACCAGTACTCGGTGTTCCAGCTGGACGGCATCGGCGGCATCAACGCCGCGCCGGGCATCAA
CTTCAACCAGCTGATCAACGGCAGCGTGACTTTCACGCCCGGCGGCACCTGCGATCTGAGCGCCAACGGCCAGTACACGA
TCAATCTGCCGACTGTCGCCAGCGGACAGTTTCCGGCGGTGGGCAGCGCGATGTCGCGCAATGCTTTCACCATCAGCGCC
GTCAATTGCTCCACCGGCGTCAGGACGGCGACTTTCCGCTTCTCGGGAACGGCCGATTCCAACAACCCGGTGTTGTTCGC
CAACACCGGCGGTACGGCGCGGGGCGTGGCCATCAATCTGGGCAGCTCGGCCGACGGCGCCAACATCGGCGCCAACACCA
CCAACAATACCCGGGTGGTGAACGTGCAGTCTCAGCAAGCGCAGCTGGGCTTGTTCGTGGAATACATGCGGACGGCGAAC
ATCGTGCCGGGAAGCTTGCAGACGGCGGTGACGATAGACATGCTGTACCAGTAG

Upstream 100 bases:

>100_bases
GCAAGCAGCTGATGGCCAGCTGGGGCAGCGAAGCGGGCCAGCAATGCCGCTTCAGCTACCAATTGCCGCAGAAGCAGGCG
GATGCCGTCTGCGCGCCGCA

Downstream 100 bases:

>100_bases
GCGGCCCCTCCGCCGGCAATGAAAAAAGCCTTCGGCTGTTCGCGCCGAAGGCTTTTTTGCGTTGCGCCAGGTCAGTTGTA
AACGATGGTGACCAGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRPGKGSQRYRESDRNMKKLICRGLRGWLLALLLAMPLTSHALGCWNGSNSSGNVTSTFNLPGNLFVSANAPVGTIIWQS
SLQNLSLYCSQSIGENVYFWVNPKRATLAPGLQIGIIFNGQTYTQSSGAIDTGIYVPRGGYVNTVLQYSIVLLKTAGAPS
SGSSSINQYSVFQLDGIGGINAAPGINFNQLINGSVTFTPGGTCDLSANGQYTINLPTVASGQFPAVGSAMSRNAFTISA
VNCSTGVRTATFRFSGTADSNNPVLFANTGGTARGVAINLGSSADGANIGANTTNNTRVVNVQSQQAQLGLFVEYMRTAN
IVPGSLQTAVTIDMLYQ

Sequences:

>Translated_337_residues
MRPGKGSQRYRESDRNMKKLICRGLRGWLLALLLAMPLTSHALGCWNGSNSSGNVTSTFNLPGNLFVSANAPVGTIIWQS
SLQNLSLYCSQSIGENVYFWVNPKRATLAPGLQIGIIFNGQTYTQSSGAIDTGIYVPRGGYVNTVLQYSIVLLKTAGAPS
SGSSSINQYSVFQLDGIGGINAAPGINFNQLINGSVTFTPGGTCDLSANGQYTINLPTVASGQFPAVGSAMSRNAFTISA
VNCSTGVRTATFRFSGTADSNNPVLFANTGGTARGVAINLGSSADGANIGANTTNNTRVVNVQSQQAQLGLFVEYMRTAN
IVPGSLQTAVTIDMLYQ
>Mature_337_residues
MRPGKGSQRYRESDRNMKKLICRGLRGWLLALLLAMPLTSHALGCWNGSNSSGNVTSTFNLPGNLFVSANAPVGTIIWQS
SLQNLSLYCSQSIGENVYFWVNPKRATLAPGLQIGIIFNGQTYTQSSGAIDTGIYVPRGGYVNTVLQYSIVLLKTAGAPS
SGSSSINQYSVFQLDGIGGINAAPGINFNQLINGSVTFTPGGTCDLSANGQYTINLPTVASGQFPAVGSAMSRNAFTISA
VNCSTGVRTATFRFSGTADSNNPVLFANTGGTARGVAINLGSSADGANIGANTTNNTRVVNVQSQQAQLGLFVEYMRTAN
IVPGSLQTAVTIDMLYQ

Specific function: May Be Involved In A Fimbrial System Chaperoned By Ybgp And Exported By Ybgq. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35366; Mature: 35366

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGKGSQRYRESDRNMKKLICRGLRGWLLALLLAMPLTSHALGCWNGSNSSGNVTSTFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECCCCCCCCEEEEEE
LPGNLFVSANAPVGTIIWQSSLQNLSLYCSQSIGENVYFWVNPKRATLAPGLQIGIIFNG
CCCEEEEECCCCEEEEEECCCHHCEEEEEECCCCCCEEEEECCCCCEECCCEEEEEEECC
QTYTQSSGAIDTGIYVPRGGYVNTVLQYSIVLLKTAGAPSSGSSSINQYSVFQLDGIGGI
CEEECCCCCEECCEEECCCCHHHHHHEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCC
NAAPGINFNQLINGSVTFTPGGTCDLSANGQYTINLPTVASGQFPAVGSAMSRNAFTISA
CCCCCCCHHHEECCEEEECCCCEEEECCCCEEEEECCEECCCCCCCCCHHHCCCEEEEEE
VNCSTGVRTATFRFSGTADSNNPVLFANTGGTARGVAINLGSSADGANIGANTTNNTRVV
EECCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE
NVQSQQAQLGLFVEYMRTANIVPGSLQTAVTIDMLYQ
EEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRPGKGSQRYRESDRNMKKLICRGLRGWLLALLLAMPLTSHALGCWNGSNSSGNVTSTFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECCCCCCCCEEEEEE
LPGNLFVSANAPVGTIIWQSSLQNLSLYCSQSIGENVYFWVNPKRATLAPGLQIGIIFNG
CCCEEEEECCCCEEEEEECCCHHCEEEEEECCCCCCEEEEECCCCCEECCCEEEEEEECC
QTYTQSSGAIDTGIYVPRGGYVNTVLQYSIVLLKTAGAPSSGSSSINQYSVFQLDGIGGI
CEEECCCCCEECCEEECCCCHHHHHHEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCC
NAAPGINFNQLINGSVTFTPGGTCDLSANGQYTINLPTVASGQFPAVGSAMSRNAFTISA
CCCCCCCHHHEECCEEEECCCCEEEECCCCEEEEECCEECCCCCCCCCHHHCCCEEEEEE
VNCSTGVRTATFRFSGTADSNNPVLFANTGGTARGVAINLGSSADGANIGANTTNNTRVV
EECCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE
NVQSQQAQLGLFVEYMRTANIVPGSLQTAVTIDMLYQ
EEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA