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The map label for this gene is ycaC [H]

Identifier: 34496739

GI number: 34496739

Start: 1350713

End: 1351366

Strand: Direct

Name: ycaC [H]

Synonym: CV_1284

Alternate gene names: 34496739

Gene position: 1350713-1351366 (Clockwise)

Preceding gene: 34496738

Following gene: 34496740

Centisome position: 28.43

GC content: 67.58

Gene sequence:

>654_bases
ATGAAACCCACCGCTAGCGCCGCCCCCAGCCCGTTGCTGCTGACCCCGCGCGATCACACCTTGATCCTGATCGACTACCA
GTCGCAGATGGCCTTCGCCACCCATTCCATCGATATCCCGACGCTGCGCAACAACGCCGGCCTGGTCGCCAGCGCCGCCG
CCGGATTCGGCGTGTCCGCCATCCTCACCACCGTGGCCGAGAAAAGCTTTTCCGGCCCGATGTTCGACGAGGTGACCGCG
CCGTTCCCGGACTTGCGCATGCTGGACCGCACGTCGATGAACACCTGGGAAGACGCCGCGGTGATCGACCGCGTCAACCA
GATCGGCAAGGGCCGCATCGTGCTGGCCGGCCTGTGGACCAGCGTCTGCATCGTCGGGCCGGCGCTGTCCGCGCTGGACC
AGGGCTTCGAGGTTTACGTGATCGCCGACGCCTGCGGCGACATTTCGGCCGAGGCGCACGAGCGCGCGATGCAGCGCATG
GTGCAGGCCGGGGCGCGGCCCATCACTTCGCTGCAGTATCTGCTGGAACTGCAGCGCGACTGGGCGCGCACGGACACCTA
TGAGCTGACCACCGGCATCGCCGCCAAGCTGGGCGGCGGCTACGGCCTGGGCATCCGCTACGCGAAAACCATGTTCGGCG
GCCACGAAGGCTGA

Upstream 100 bases:

>100_bases
GGACACCCGGGAATGACACGCCTGGCGCGCAGGGGCGGCGGCCCCTCTGGCGCCGGCTCATCGAATCGGCCGCCGCCATG
CACACAATGGAGAAACCGTG

Downstream 100 bases:

>100_bases
TTGCCGCGCCGCCGCCGGCCGCGCGTCCGCCGGCGGCGGCCGATATCCAGGGGAGAAGCCACCATGGCTATAGCTGATGT
GATTCTGCGCAATGGCCGCA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKPTASAAPSPLLLTPRDHTLILIDYQSQMAFATHSIDIPTLRNNAGLVASAAAGFGVSAILTTVAEKSFSGPMFDEVTA
PFPDLRMLDRTSMNTWEDAAVIDRVNQIGKGRIVLAGLWTSVCIVGPALSALDQGFEVYVIADACGDISAEAHERAMQRM
VQAGARPITSLQYLLELQRDWARTDTYELTTGIAAKLGGGYGLGIRYAKTMFGGHEG

Sequences:

>Translated_217_residues
MKPTASAAPSPLLLTPRDHTLILIDYQSQMAFATHSIDIPTLRNNAGLVASAAAGFGVSAILTTVAEKSFSGPMFDEVTA
PFPDLRMLDRTSMNTWEDAAVIDRVNQIGKGRIVLAGLWTSVCIVGPALSALDQGFEVYVIADACGDISAEAHERAMQRM
VQAGARPITSLQYLLELQRDWARTDTYELTTGIAAKLGGGYGLGIRYAKTMFGGHEG
>Mature_217_residues
MKPTASAAPSPLLLTPRDHTLILIDYQSQMAFATHSIDIPTLRNNAGLVASAAAGFGVSAILTTVAEKSFSGPMFDEVTA
PFPDLRMLDRTSMNTWEDAAVIDRVNQIGKGRIVLAGLWTSVCIVGPALSALDQGFEVYVIADACGDISAEAHERAMQRM
VQAGARPITSLQYLLELQRDWARTDTYELTTGIAAKLGGGYGLGIRYAKTMFGGHEG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=179, Percent_Identity=34.0782122905028, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23220; Mature: 23220

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTASAAPSPLLLTPRDHTLILIDYQSQMAFATHSIDIPTLRNNAGLVASAAAGFGVSA
CCCCCCCCCCCEEECCCCCEEEEEECCCCEEEHCCCCCCCCCCCCCCEEEEHHCCCCHHH
ILTTVAEKSFSGPMFDEVTAPFPDLRMLDRTSMNTWEDAAVIDRVNQIGKGRIVLAGLWT
HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEHHH
SVCIVGPALSALDQGFEVYVIADACGDISAEAHERAMQRMVQAGARPITSLQYLLELQRD
HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
WARTDTYELTTGIAAKLGGGYGLGIRYAKTMFGGHEG
HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKPTASAAPSPLLLTPRDHTLILIDYQSQMAFATHSIDIPTLRNNAGLVASAAAGFGVSA
CCCCCCCCCCCEEECCCCCEEEEEECCCCEEEHCCCCCCCCCCCCCCEEEEHHCCCCHHH
ILTTVAEKSFSGPMFDEVTAPFPDLRMLDRTSMNTWEDAAVIDRVNQIGKGRIVLAGLWT
HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEHHH
SVCIVGPALSALDQGFEVYVIADACGDISAEAHERAMQRMVQAGARPITSLQYLLELQRD
HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
WARTDTYELTTGIAAKLGGGYGLGIRYAKTMFGGHEG
HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]