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The map label for this gene is yhhW [C]

Identifier: 34496738

GI number: 34496738

Start: 1349927

End: 1350628

Strand: Direct

Name: yhhW [C]

Synonym: CV_1283

Alternate gene names: 34496738

Gene position: 1349927-1350628 (Clockwise)

Preceding gene: 34496736

Following gene: 34496739

Centisome position: 28.41

GC content: 69.8

Gene sequence:

>702_bases
ATGATCGAACGCCGCCCCTTCGCCAGCTTGGGCGCAGCCCAACACGGATGGCTGGACGCCAAGCACCATTTCTCCTTCGC
CGACTACCGCGATCCGGCGCGCATGCACTGGGGCGCGCTGCGGGTGTGGAACGACGACACCATCGCCGCCGGCAGCGGCT
TCGCACCGCATCCGCACGCCGACATGGAGATCATCACCTATGTCCGCGAGGGCGCGATCAGCCACCAGGACAACCTGGGC
AACCGCGGCCGCACCGAGGCCGGCGACGTGCAGGTGATGAGCGCCGGCAGCGGCATCGTCCATTCCGAATACAACCTGGA
GCCTGTCGCCACCCGCATCTTCCAGATCTGGATCTATCCGGACAGCCGCGGCGGCGAGCCGTCTTGGGGCAGCAAGCCTT
TTCCCAAGGCCGACCGCTCCGGCGCCTTCGTCGCGCTGGCCAGCGGCATGGATGGTGACGACGGCGCGCTGCCGATACGC
GCCGACGCCCGGGTGCTGGGCGCCACGCTGAAGGCAGGCGAAAGCGCCGACTACCGGCTGGGCGCCGGCCGCCGCGGCTA
TCTGGTGCTGTCGGCCGGATCGGCCCGGGTGAACGGCGTGGCGCTGGAGACCGGCGACGGCGCGGCCATCCGCCATGAAG
ACCTGGTCCGCGTCGAGGCCGGCGAGGATGCCGAACTGATCCTGGTGGACACCCGGGAATGA

Upstream 100 bases:

>100_bases
ATTGATCATGATAAAAATAGAAATGATGCTATTCAATCTATTCCATTTTAATCCTACTCCCGGCTGCTTATAGTGTGCGT
ATCCATTTCAGGAGACCGAC

Downstream 100 bases:

>100_bases
CACGCCTGGCGCGCAGGGGCGGCGGCCCCTCTGGCGCCGGCTCATCGAATCGGCCGCCGCCATGCACACAATGGAGAAAC
CGTGATGAAACCCACCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MIERRPFASLGAAQHGWLDAKHHFSFADYRDPARMHWGALRVWNDDTIAAGSGFAPHPHADMEIITYVREGAISHQDNLG
NRGRTEAGDVQVMSAGSGIVHSEYNLEPVATRIFQIWIYPDSRGGEPSWGSKPFPKADRSGAFVALASGMDGDDGALPIR
ADARVLGATLKAGESADYRLGAGRRGYLVLSAGSARVNGVALETGDGAAIRHEDLVRVEAGEDAELILVDTRE

Sequences:

>Translated_233_residues
MIERRPFASLGAAQHGWLDAKHHFSFADYRDPARMHWGALRVWNDDTIAAGSGFAPHPHADMEIITYVREGAISHQDNLG
NRGRTEAGDVQVMSAGSGIVHSEYNLEPVATRIFQIWIYPDSRGGEPSWGSKPFPKADRSGAFVALASGMDGDDGALPIR
ADARVLGATLKAGESADYRLGAGRRGYLVLSAGSARVNGVALETGDGAAIRHEDLVRVEAGEDAELILVDTRE
>Mature_233_residues
MIERRPFASLGAAQHGWLDAKHHFSFADYRDPARMHWGALRVWNDDTIAAGSGFAPHPHADMEIITYVREGAISHQDNLG
NRGRTEAGDVQVMSAGSGIVHSEYNLEPVATRIFQIWIYPDSRGGEPSWGSKPFPKADRSGAFVALASGMDGDDGALPIR
ADARVLGATLKAGESADYRLGAGRRGYLVLSAGSARVNGVALETGDGAAIRHEDLVRVEAGEDAELILVDTRE

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=42.4892703862661, Blast_Score=183, Evalue=9e-48,
Organism=Escherichia coli, GI1789493, Length=238, Percent_Identity=29.8319327731092, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25047; Mature: 25047

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERRPFASLGAAQHGWLDAKHHFSFADYRDPARMHWGALRVWNDDTIAAGSGFAPHPHA
CCCCCCCHHCCCCCCCCCCCHHCCCCCCCCCCCHHCCCEEEEECCCEEECCCCCCCCCCC
DMEIITYVREGAISHQDNLGNRGRTEAGDVQVMSAGSGIVHSEYNLEPVATRIFQIWIYP
CHHHEEEHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHEEEEEEEEEEE
DSRGGEPSWGSKPFPKADRSGAFVALASGMDGDDGALPIRADARVLGATLKAGESADYRL
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCEEE
GAGRRGYLVLSAGSARVNGVALETGDGAAIRHEDLVRVEAGEDAELILVDTRE
CCCCCCEEEEECCCCEEEEEEEECCCCCEEECCCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MIERRPFASLGAAQHGWLDAKHHFSFADYRDPARMHWGALRVWNDDTIAAGSGFAPHPHA
CCCCCCCHHCCCCCCCCCCCHHCCCCCCCCCCCHHCCCEEEEECCCEEECCCCCCCCCCC
DMEIITYVREGAISHQDNLGNRGRTEAGDVQVMSAGSGIVHSEYNLEPVATRIFQIWIYP
CHHHEEEHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHEEEEEEEEEEE
DSRGGEPSWGSKPFPKADRSGAFVALASGMDGDDGALPIRADARVLGATLKAGESADYRL
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCEEE
GAGRRGYLVLSAGSARVNGVALETGDGAAIRHEDLVRVEAGEDAELILVDTRE
CCCCCCEEEEECCCCEEEEEEEECCCCCEEECCCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]