| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is chrA [H]
Identifier: 34496726
GI number: 34496726
Start: 1336594
End: 1337907
Strand: Reverse
Name: chrA [H]
Synonym: CV_1271
Alternate gene names: 34496726
Gene position: 1337907-1336594 (Counterclockwise)
Preceding gene: 34496728
Following gene: 34496724
Centisome position: 28.16
GC content: 74.35
Gene sequence:
>1314_bases ATGCGGCATCGCGCCGCCGGCGGGAAAGCCCGCCGGTCAAATCCCGGCGCAAACGCGCCGGCCGCTTCAAGCCGCCTGGG TTTTCCGTTATCGTGTGGCGCTCCACCACCCGCCATGCGCGCCATGATTCCACACGACACCGTACGCGACCGCGGCTTCT GGCGCATTCTGCTGGTTTTCCTGAAGCTCGGCCTGACCTCGTTCGGCGGCCCGGTCGCCCACCTCGGCTACTTCCGCGCC GAATTCGTCGAGCGCCGACGCTGGCTGCCGGAGCGCGATTACGCCGACCTGGTGGCGCTGTGCCAATTCCTGCCGGGCCC GGCCAGCAGCCAGGTGGGCATGGGTTTGGGCCTGGCCCGTGGCGGGCTGCCCGGCGCGCTGGCGGCCTGGCTGGGCTTCA CGCTGCCGTCTGCGCTGATCATGCTGGCGCTGGCGGCAGGCCTCTCCGGCCAGGCGCAGGCGATTCCGCCCGGTCTGCTG CACGGACTGAAGCTGGCGGCGGTCGCCGTGGTGGCGCAGGCGGTGTGGAGCATGGCGCGCCAGCTATGCCCGGACCGCCC GCGGCTGACGCTGATGGCGGCGGCCTGCTGCCTGGCCCTGCTGATCCATGCGCCCTGGCTGCCGCTGGCGGTGATCGCGC TGGCGGGCGTCGCCGGCCGTTGCTGTTTGCCCGCCGCAGCCGCGCCTCCCATCGCCGCCGACTCCGCGCTCCCGCCGTCC CGCCGCCGCGGCGCGCTGTGGCTGGCGCTGTTCTTCGCGCTGCTGGCCGGCCTGCCGCTGCTCGCCGCCATCGTTCCCGG CCGCGGCCTGGCGATGTTCGACGCCTTCTACCGCAGCGGCGCGCTGGTGTTCGGCGGCGGCCACGTGGTGCTGCCGCTGC TGGAGAACGCCGCCGTGGCCAGCGGCTGGGTGGAGAAGGATGCTTTTCTGGCCGGCTACGGCGCGGCGCAGGCGCTGCCC GGACCGCTGTTCGCCTTCGCGGCCTTTCTCGGCGCCGCCGGCGGCGGCTGGCTGGACGGCGCGCTGGCGCTGGCCGCCAT CTTCCTGCCCGGCTTCCTGCTGCTGGCCGGCGCGCTGCCGTTCTGGCGCCGCTTGCGCGCCGCGCCCGGCGCCCAATCGG CGCTGGCCGGGGTCAACGCCGCGGTGGTCGGCCTGCTGCTGGCCGCGTTCTACCACCCAGTCTGGACTGAAACGGTGCGC GCGCCGGCCGATTTCGCCGCCGCGCTGCTTGCCCTGCTGGCGCTGGCCGCATGGAGGCTGCCGCCCTGGCTGGTGGTGGG CCTGTGCGCGGCGGCGGGTTGGCTGACGCGGTAA
Upstream 100 bases:
>100_bases TCATCGGGGAAAGGCTTGAGGCTGGGGTGATGCATGCTGGTCTCCGGTGAAAACGGCTATGCCCTGTTGGTCGGCGCGGC GGCCGGCAAGTTCGGCGATG
Downstream 100 bases:
>100_bases ACGAAACAGCCCGCCGGGCGGCGGGCTGAGATGGCTGACGCAGCGGACGATCAGTCCAGGTATTTCTTGAAGAACCGCTC CATCGCGCCGTAGGCGGCGA
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MRHRAAGGKARRSNPGANAPAASSRLGFPLSCGAPPPAMRAMIPHDTVRDRGFWRILLVFLKLGLTSFGGPVAHLGYFRA EFVERRRWLPERDYADLVALCQFLPGPASSQVGMGLGLARGGLPGALAAWLGFTLPSALIMLALAAGLSGQAQAIPPGLL HGLKLAAVAVVAQAVWSMARQLCPDRPRLTLMAAACCLALLIHAPWLPLAVIALAGVAGRCCLPAAAAPPIAADSALPPS RRRGALWLALFFALLAGLPLLAAIVPGRGLAMFDAFYRSGALVFGGGHVVLPLLENAAVASGWVEKDAFLAGYGAAQALP GPLFAFAAFLGAAGGGWLDGALALAAIFLPGFLLLAGALPFWRRLRAAPGAQSALAGVNAAVVGLLLAAFYHPVWTETVR APADFAAALLALLALAAWRLPPWLVVGLCAAAGWLTR
Sequences:
>Translated_437_residues MRHRAAGGKARRSNPGANAPAASSRLGFPLSCGAPPPAMRAMIPHDTVRDRGFWRILLVFLKLGLTSFGGPVAHLGYFRA EFVERRRWLPERDYADLVALCQFLPGPASSQVGMGLGLARGGLPGALAAWLGFTLPSALIMLALAAGLSGQAQAIPPGLL HGLKLAAVAVVAQAVWSMARQLCPDRPRLTLMAAACCLALLIHAPWLPLAVIALAGVAGRCCLPAAAAPPIAADSALPPS RRRGALWLALFFALLAGLPLLAAIVPGRGLAMFDAFYRSGALVFGGGHVVLPLLENAAVASGWVEKDAFLAGYGAAQALP GPLFAFAAFLGAAGGGWLDGALALAAIFLPGFLLLAGALPFWRRLRAAPGAQSALAGVNAAVVGLLLAAFYHPVWTETVR APADFAAALLALLALAAWRLPPWLVVGLCAAAGWLTR >Mature_437_residues MRHRAAGGKARRSNPGANAPAASSRLGFPLSCGAPPPAMRAMIPHDTVRDRGFWRILLVFLKLGLTSFGGPVAHLGYFRA EFVERRRWLPERDYADLVALCQFLPGPASSQVGMGLGLARGGLPGALAAWLGFTLPSALIMLALAAGLSGQAQAIPPGLL HGLKLAAVAVVAQAVWSMARQLCPDRPRLTLMAAACCLALLIHAPWLPLAVIALAGVAGRCCLPAAAAPPIAADSALPPS RRRGALWLALFFALLAGLPLLAAIVPGRGLAMFDAFYRSGALVFGGGHVVLPLLENAAVASGWVEKDAFLAGYGAAQALP GPLFAFAAFLGAAGGGWLDGALALAAIFLPGFLLLAGALPFWRRLRAAPGAQSALAGVNAAVVGLLLAAFYHPVWTETVR APADFAAALLALLALAAWRLPPWLVVGLCAAAGWLTR
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 45102; Mature: 45102
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRAAGGKARRSNPGANAPAASSRLGFPLSCGAPPPAMRAMIPHDTVRDRGFWRILLVF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCHHHHHHHHH LKLGLTSFGGPVAHLGYFRAEFVERRRWLPERDYADLVALCQFLPGPASSQVGMGLGLAR HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHC GGLPGALAAWLGFTLPSALIMLALAAGLSGQAQAIPPGLLHGLKLAAVAVVAQAVWSMAR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLCPDRPRLTLMAAACCLALLIHAPWLPLAVIALAGVAGRCCLPAAAAPPIAADSALPPS HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC RRRGALWLALFFALLAGLPLLAAIVPGRGLAMFDAFYRSGALVFGGGHVVLPLLENAAVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCEEEEHHHHHHHHH SGWVEKDAFLAGYGAAQALPGPLFAFAAFLGAAGGGWLDGALALAAIFLPGFLLLAGALP HCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FWRRLRAAPGAQSALAGVNAAVVGLLLAAFYHPVWTETVRAPADFAAALLALLALAAWRL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PPWLVVGLCAAAGWLTR CHHHHHHHHHHHHHCCC >Mature Secondary Structure MRHRAAGGKARRSNPGANAPAASSRLGFPLSCGAPPPAMRAMIPHDTVRDRGFWRILLVF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCHHHHHHHHH LKLGLTSFGGPVAHLGYFRAEFVERRRWLPERDYADLVALCQFLPGPASSQVGMGLGLAR HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHC GGLPGALAAWLGFTLPSALIMLALAAGLSGQAQAIPPGLLHGLKLAAVAVVAQAVWSMAR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLCPDRPRLTLMAAACCLALLIHAPWLPLAVIALAGVAGRCCLPAAAAPPIAADSALPPS HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC RRRGALWLALFFALLAGLPLLAAIVPGRGLAMFDAFYRSGALVFGGGHVVLPLLENAAVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCEEEEHHHHHHHHH SGWVEKDAFLAGYGAAQALPGPLFAFAAFLGAAGGGWLDGALALAAIFLPGFLLLAGALP HCCHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FWRRLRAAPGAQSALAGVNAAVVGLLLAAFYHPVWTETVRAPADFAAALLALLALAAWRL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PPWLVVGLCAAAGWLTR CHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2152903 [H]