| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496724
Identifier: 34496724
GI number: 34496724
Start: 1332507
End: 1334402
Strand: Reverse
Name: 34496724
Synonym: CV_1269
Alternate gene names: NA
Gene position: 1334402-1332507 (Counterclockwise)
Preceding gene: 34496726
Following gene: 34496723
Centisome position: 28.09
GC content: 65.93
Gene sequence:
>1896_bases ATGAGCCGCCTCCTCCCTTCGCTGACTTTCCTCGCCGCCGCGCTGGCCAGCCTGCCGGCCGCCGCCGCACCGGCCGCGCC GGACTATGTCGATCCCGGCCAGTTCCTCAAGGCCGCCGGCCAGCGCGTGCTGCCCCCCGACATTCCCTGGCACGGCAAAA GCCAGCAGTTCGCCGCCGCCAAAGACGATCCGTGGGCCACGCCGCTGGAAGCCTCGGGCTTCGCCCACACGCCGCCCTAC CCGGAAACGCTGGCCTATCTGCAAAAGCTGGCGGCAGCGAAGCCTGACTTGATCCAGTTGACCGAGCTGCAGGAGAAAAC CGGCGAGGGCCGGCCGTTCATGATGGCGGTGGCGTCCAGCAGCGCCGACAAGTCCGCGGCCGGACTCAAGGCTTCCGGCA AGCCGACGATCTACATCGAAGCCGGCATCCACCCGGGCGAAGCCAACGGCAAGGACGCCGGCCTGATGCTGCTGCGCGAC CTCACCGTCGGCGGCGCGCAACGCGCCTTGCTGGACAAGGTGAACATCCTGTTCGTTCCCACCGTCAACATCGACGGCGA CGTGCGCTACGGCAAATACGGCCGCATCAACCAGAACGGTCCCGACGAGACCGGCTGGCGCGTCAACAGCCGCAACCTCA ACCTGAACCGCGACTTCGCCAAGCTGGACAGCCCGGAAATCCGCAACGTGGCGCGGGTGCTGGGCCAATACCAGCCGGAC TTCTTCATCGACACCCACAGCACCGACGGCGTCAATTACCAGTACGACGTCACCTACTGCAACAACGGCCAGGGCTGGTC GCCGGCCTCCAGCCGCTGGATGGACCAGGTGATGACGCCCTATGTCTACCGCCAGCTGCGCGCCTACGGCCATGAGCCCA ATGTCTGCATCTCGATGAACGACAACGAGGACATCGGCAAGGGCTACTACCCCTATTACAGCGATCTGGCGCGCTTCTCC AACCAGTACGCCGACGTGCGCGGCATTCCCGCCATCCTGGTGGAGCTGCACGCGCTCAAGCCGTACAGACAGCAGGTGCT GGGCAATTACGCGCTGTACAAGGCCATCCTGGAAAGCGTGGCCGCCAATAAGGACAGCTTGCGCGCCGCCATCGCCGCAG ACCGCGCGGCGCGGCCCAAGAACGTGACGCTGACCTGGAAGGCAGCCGACGGCCAGCCGCAGATGGTGGACTTCAAGGGC GTCAAGTTCGAGAAAACGCAATCGCCGATCACCGGCGACAAGATCGTGCGCTGGAGCAACCAGCCGCAGCACTACCAGAT CCCGATCACGCCGCAGTCCGAGCCCGATCTGGTCGTCGCGCGGCCCAAGGCCTACGTGGTGCCGGCGCAATGGCGGGAAG TGATAGAGCGGCTGAAGGTGCACGGTATCGCCATGACCACGCTGGACAAGCCGACCGCGCTGGACGTCACCGCCTACCGG CTGGACGAGGTCAAGCTGGGCACGCCGTTCGAGCCCGACCGCGAATCCGCCGACAAGATTCCCGGTTACGAAGGCCGGCT GCTGATCAGCGGCAAGCCGGTGGCGATGCCGCGCAAGGTCACTTATCCGGCCGGCTCGGCGGTGATCGATCCCGATCAGC CTTTGGGCGCGCTGGCCATGGTGCTGCTGGAGCCGTCGAGTCCGGACTCCTTCCTGAGCTGGGGCTTCTTCAACGCCAAC CTGACCTCGGCCGAAGCGCCCGAAGCCTACGTGATGGAGCCGATGGCGCGGCGGATGCTGGCGGAAAGCCCCGAACTTCG CAAAGCCTTCGCCGACAAGCTCAAGGCCGACCCCAAGTTCGCCAAGGACCGCAACGCCCGGCTCAACTGGTTCTACGAGC GCACGCCGTTCGCCGACAGCAACCGCTACCTCTACCCGGTGGGCATCATCCGCTGA
Upstream 100 bases:
>100_bases AAACCTCCTGTTTGACAGCCATCAAGCAGGATGGATCAGGCGATCCGAAACCCGCGGCACAAGGCGTAAGCTGGCGCGAT TCCAACTCCCGGAGCCTTCC
Downstream 100 bases:
>100_bases CGGCGTCCCGGCCGCGCCTTGGCGACGGCCGGGCCTACAATGCAAGTATGAGGCTCGGAGCCCGGCATGCGCATCAGGAT GCTGGCCGCAGCCGCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxypeptidase; M14 Family Peptidase; Peptidase Family M; Zink-Carboxypeptidase; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family; Zinc Carboxypeptidase Family Protein; Zinc-Carboxypeptidase; Secreted Protein
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MSRLLPSLTFLAAALASLPAAAAPAAPDYVDPGQFLKAAGQRVLPPDIPWHGKSQQFAAAKDDPWATPLEASGFAHTPPY PETLAYLQKLAAAKPDLIQLTELQEKTGEGRPFMMAVASSSADKSAAGLKASGKPTIYIEAGIHPGEANGKDAGLMLLRD LTVGGAQRALLDKVNILFVPTVNIDGDVRYGKYGRINQNGPDETGWRVNSRNLNLNRDFAKLDSPEIRNVARVLGQYQPD FFIDTHSTDGVNYQYDVTYCNNGQGWSPASSRWMDQVMTPYVYRQLRAYGHEPNVCISMNDNEDIGKGYYPYYSDLARFS NQYADVRGIPAILVELHALKPYRQQVLGNYALYKAILESVAANKDSLRAAIAADRAARPKNVTLTWKAADGQPQMVDFKG VKFEKTQSPITGDKIVRWSNQPQHYQIPITPQSEPDLVVARPKAYVVPAQWREVIERLKVHGIAMTTLDKPTALDVTAYR LDEVKLGTPFEPDRESADKIPGYEGRLLISGKPVAMPRKVTYPAGSAVIDPDQPLGALAMVLLEPSSPDSFLSWGFFNAN LTSAEAPEAYVMEPMARRMLAESPELRKAFADKLKADPKFAKDRNARLNWFYERTPFADSNRYLYPVGIIR
Sequences:
>Translated_631_residues MSRLLPSLTFLAAALASLPAAAAPAAPDYVDPGQFLKAAGQRVLPPDIPWHGKSQQFAAAKDDPWATPLEASGFAHTPPY PETLAYLQKLAAAKPDLIQLTELQEKTGEGRPFMMAVASSSADKSAAGLKASGKPTIYIEAGIHPGEANGKDAGLMLLRD LTVGGAQRALLDKVNILFVPTVNIDGDVRYGKYGRINQNGPDETGWRVNSRNLNLNRDFAKLDSPEIRNVARVLGQYQPD FFIDTHSTDGVNYQYDVTYCNNGQGWSPASSRWMDQVMTPYVYRQLRAYGHEPNVCISMNDNEDIGKGYYPYYSDLARFS NQYADVRGIPAILVELHALKPYRQQVLGNYALYKAILESVAANKDSLRAAIAADRAARPKNVTLTWKAADGQPQMVDFKG VKFEKTQSPITGDKIVRWSNQPQHYQIPITPQSEPDLVVARPKAYVVPAQWREVIERLKVHGIAMTTLDKPTALDVTAYR LDEVKLGTPFEPDRESADKIPGYEGRLLISGKPVAMPRKVTYPAGSAVIDPDQPLGALAMVLLEPSSPDSFLSWGFFNAN LTSAEAPEAYVMEPMARRMLAESPELRKAFADKLKADPKFAKDRNARLNWFYERTPFADSNRYLYPVGIIR >Mature_630_residues SRLLPSLTFLAAALASLPAAAAPAAPDYVDPGQFLKAAGQRVLPPDIPWHGKSQQFAAAKDDPWATPLEASGFAHTPPYP ETLAYLQKLAAAKPDLIQLTELQEKTGEGRPFMMAVASSSADKSAAGLKASGKPTIYIEAGIHPGEANGKDAGLMLLRDL TVGGAQRALLDKVNILFVPTVNIDGDVRYGKYGRINQNGPDETGWRVNSRNLNLNRDFAKLDSPEIRNVARVLGQYQPDF FIDTHSTDGVNYQYDVTYCNNGQGWSPASSRWMDQVMTPYVYRQLRAYGHEPNVCISMNDNEDIGKGYYPYYSDLARFSN QYADVRGIPAILVELHALKPYRQQVLGNYALYKAILESVAANKDSLRAAIAADRAARPKNVTLTWKAADGQPQMVDFKGV KFEKTQSPITGDKIVRWSNQPQHYQIPITPQSEPDLVVARPKAYVVPAQWREVIERLKVHGIAMTTLDKPTALDVTAYRL DEVKLGTPFEPDRESADKIPGYEGRLLISGKPVAMPRKVTYPAGSAVIDPDQPLGALAMVLLEPSSPDSFLSWGFFNANL TSAEAPEAYVMEPMARRMLAESPELRKAFADKLKADPKFAKDRNARLNWFYERTPFADSNRYLYPVGIIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69752; Mature: 69621
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLPSLTFLAAALASLPAAAAPAAPDYVDPGQFLKAAGQRVLPPDIPWHGKSQQFAAA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC KDDPWATPLEASGFAHTPPYPETLAYLQKLAAAKPDLIQLTELQEKTGEGRPFMMAVASS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCEEEEEECC SADKSAAGLKASGKPTIYIEAGIHPGEANGKDAGLMLLRDLTVGGAQRALLDKVNILFVP CCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEE TVNIDGDVRYGKYGRINQNGPDETGWRVNSRNLNLNRDFAKLDSPEIRNVARVLGQYQPD EECCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCCCC FFIDTHSTDGVNYQYDVTYCNNGQGWSPASSRWMDQVMTPYVYRQLRAYGHEPNVCISMN EEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC DNEDIGKGYYPYYSDLARFSNQYADVRGIPAILVELHALKPYRQQVLGNYALYKAILESV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AANKDSLRAAIAADRAARPKNVTLTWKAADGQPQMVDFKGVKFEKTQSPITGDKIVRWSN HCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCEEECCCCCCCCCCEEEECC QPQHYQIPITPQSEPDLVVARPKAYVVPAQWREVIERLKVHGIAMTTLDKPTALDVTAYR CCCEEEEECCCCCCCCEEEECCCEEEECHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEE LDEVKLGTPFEPDRESADKIPGYEGRLLISGKPVAMPRKVTYPAGSAVIDPDQPLGALAM ECEEECCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCEEECCCCCHHHEEE VLLEPSSPDSFLSWGFFNANLTSAEAPEAYVMEPMARRMLAESPELRKAFADKLKADPKF EEECCCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC AKDRNARLNWFYERTPFADSNRYLYPVGIIR CCCCCCCEEEEEECCCCCCCCCEEEEEECCC >Mature Secondary Structure SRLLPSLTFLAAALASLPAAAAPAAPDYVDPGQFLKAAGQRVLPPDIPWHGKSQQFAAA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC KDDPWATPLEASGFAHTPPYPETLAYLQKLAAAKPDLIQLTELQEKTGEGRPFMMAVASS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCEEEEEECC SADKSAAGLKASGKPTIYIEAGIHPGEANGKDAGLMLLRDLTVGGAQRALLDKVNILFVP CCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEE TVNIDGDVRYGKYGRINQNGPDETGWRVNSRNLNLNRDFAKLDSPEIRNVARVLGQYQPD EECCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCCCC FFIDTHSTDGVNYQYDVTYCNNGQGWSPASSRWMDQVMTPYVYRQLRAYGHEPNVCISMN EEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC DNEDIGKGYYPYYSDLARFSNQYADVRGIPAILVELHALKPYRQQVLGNYALYKAILESV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AANKDSLRAAIAADRAARPKNVTLTWKAADGQPQMVDFKGVKFEKTQSPITGDKIVRWSN HCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCEEECCCCCCCCCCEEEECC QPQHYQIPITPQSEPDLVVARPKAYVVPAQWREVIERLKVHGIAMTTLDKPTALDVTAYR CCCEEEEECCCCCCCCEEEECCCEEEECHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEE LDEVKLGTPFEPDRESADKIPGYEGRLLISGKPVAMPRKVTYPAGSAVIDPDQPLGALAM ECEEECCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEECCCCCEEECCCCCHHHEEE VLLEPSSPDSFLSWGFFNANLTSAEAPEAYVMEPMARRMLAESPELRKAFADKLKADPKF EEECCCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC AKDRNARLNWFYERTPFADSNRYLYPVGIIR CCCCCCCEEEEEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA