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The map label for this gene is yafS [H]

Identifier: 34496710

GI number: 34496710

Start: 1320899

End: 1321663

Strand: Direct

Name: yafS [H]

Synonym: CV_1255

Alternate gene names: 34496710

Gene position: 1320899-1321663 (Clockwise)

Preceding gene: 34496707

Following gene: 34496711

Centisome position: 27.8

GC content: 66.8

Gene sequence:

>765_bases
ATGAAAAATTCGTTTGGCGCCTGGCTGACCGGCACCGAGCTCGGACGCTACCTGCTTGAACGCGAGCAGGCGTATTTCGA
GCGCGCGGTGGCCGATGCCTTCGGCTACCACGCGGTGCAGGTCGGGTTGCCGGAGATGGATTGCCTGCGCGGCAACCGCA
TCCCCTGGCAGTGCCGGGTGGCCGAGTCCGGCGAGGTCGACGTGCGCTGCGATCCCGCTTTCCTGCCGTTCGAGACCCGC
AGCCTGGATTTGCTGGTGATGCCTCATGTGCTGGATTTTACCACTCAGCCGCACCAGGTATTGCGCGAAGCGGACCGCGT
GCTGATGCCGGAAGGGCGCCTGATCCTGACCGGCTTCAATCCCTTGTCGCTGTGGGGCGTGCGCCGGCTGATCCAGGGCA
AGGAGTCGGCGCCGTGGAACGGCAGCTTCTTCACCCAGCTGCGGATCAAGGACTGGCTGGCGCTGCTGGAGCTGGAGCTG
GACGACAGCGCCTTCATGGCGTACGCGCCGCCGTTTTCCCGCCAGGACTGGCTGGGCCGCTGCGGCTTCATGGAAGACGC
CGGCGAGCGCTGGTGGCCGCTGGCGGGCGGGGTGTACGGCATAGAAGCGGTCAAGCGGCAGCGCGGCATGCGGCTGATCA
CGCCCAACTGGAAGCAGCAGGGCAAGAAAAAGGGCGCGCTGGGCGTGGTGGCGGGCAATGAGCGCCAGCACACGCACAAG
CGGCCGGAAACCACCGAGCGGGACGGCGCATCGTCCTGCCAATGA

Upstream 100 bases:

>100_bases
GGCGACGGCGCGCGCGCCCTCGCGCAAAACCCAGATATAATTGTCAGTGAATGCCCCAACCGGGGCGATGCTAAACATGG
CTGCCATAAGGCTTTCCCCC

Downstream 100 bases:

>100_bases
ACGAGACAGCATGACGACAGAAGACAGAGTCGAGATCTATACCGACGGCGCCTGCAAGGGCAACCCGGGGCCCGGGGGCT
GGGGCGCGCTGATGCGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKNSFGAWLTGTELGRYLLEREQAYFERAVADAFGYHAVQVGLPEMDCLRGNRIPWQCRVAESGEVDVRCDPAFLPFETR
SLDLLVMPHVLDFTTQPHQVLREADRVLMPEGRLILTGFNPLSLWGVRRLIQGKESAPWNGSFFTQLRIKDWLALLELEL
DDSAFMAYAPPFSRQDWLGRCGFMEDAGERWWPLAGGVYGIEAVKRQRGMRLITPNWKQQGKKKGALGVVAGNERQHTHK
RPETTERDGASSCQ

Sequences:

>Translated_254_residues
MKNSFGAWLTGTELGRYLLEREQAYFERAVADAFGYHAVQVGLPEMDCLRGNRIPWQCRVAESGEVDVRCDPAFLPFETR
SLDLLVMPHVLDFTTQPHQVLREADRVLMPEGRLILTGFNPLSLWGVRRLIQGKESAPWNGSFFTQLRIKDWLALLELEL
DDSAFMAYAPPFSRQDWLGRCGFMEDAGERWWPLAGGVYGIEAVKRQRGMRLITPNWKQQGKKKGALGVVAGNERQHTHK
RPETTERDGASSCQ
>Mature_254_residues
MKNSFGAWLTGTELGRYLLEREQAYFERAVADAFGYHAVQVGLPEMDCLRGNRIPWQCRVAESGEVDVRCDPAFLPFETR
SLDLLVMPHVLDFTTQPHQVLREADRVLMPEGRLILTGFNPLSLWGVRRLIQGKESAPWNGSFFTQLRIKDWLALLELEL
DDSAFMAYAPPFSRQDWLGRCGFMEDAGERWWPLAGGVYGIEAVKRQRGMRLITPNWKQQGKKKGALGVVAGNERQHTHK
RPETTERDGASSCQ

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=229, Percent_Identity=33.1877729257642, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28909; Mature: 28909

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSFGAWLTGTELGRYLLEREQAYFERAVADAFGYHAVQVGLPEMDCLRGNRIPWQCRV
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHCCCCCCEEEEE
AESGEVDVRCDPAFLPFETRSLDLLVMPHVLDFTTQPHQVLREADRVLMPEGRLILTGFN
CCCCCEEEEECCCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHEECCCCCEEEECCC
PLSLWGVRRLIQGKESAPWNGSFFTQLRIKDWLALLELELDDSAFMAYAPPFSRQDWLGR
HHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHH
CGFMEDAGERWWPLAGGVYGIEAVKRQRGMRLITPNWKQQGKKKGALGVVAGNERQHTHK
CCCHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHCCCCCCEEEEECCCCCCCCC
RPETTERDGASSCQ
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKNSFGAWLTGTELGRYLLEREQAYFERAVADAFGYHAVQVGLPEMDCLRGNRIPWQCRV
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHCCCCCCEEEEE
AESGEVDVRCDPAFLPFETRSLDLLVMPHVLDFTTQPHQVLREADRVLMPEGRLILTGFN
CCCCCEEEEECCCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHEECCCCCEEEECCC
PLSLWGVRRLIQGKESAPWNGSFFTQLRIKDWLALLELELDDSAFMAYAPPFSRQDWLGR
HHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHH
CGFMEDAGERWWPLAGGVYGIEAVKRQRGMRLITPNWKQQGKKKGALGVVAGNERQHTHK
CCCHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHCCCCCCEEEEECCCCCCCCC
RPETTERDGASSCQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]