| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yeeA [H]
Identifier: 34496707
GI number: 34496707
Start: 1316968
End: 1318029
Strand: Direct
Name: yeeA [H]
Synonym: CV_1252
Alternate gene names: 34496707
Gene position: 1316968-1318029 (Clockwise)
Preceding gene: 34496706
Following gene: 34496710
Centisome position: 27.72
GC content: 68.93
Gene sequence:
>1062_bases ATGGGCGGGAGGTGGCAGCATCCGTGGCGGGTTCTGGTGGTGCCCTATTATTTGAACCGCTACGCGCGCCAGGTGCACGT GCTGAGAGTGGCGTTGGCTTTCCTGTTCGGGTTGGCGCTGGTGCTGGCCAGCGGCATTCCCCATGGCGGCTGGATGCTGG TGACGATATTGATCGTGCTGGGCGGCGTGCCGCACTGGGGCGGGGTGAGGCGCAAGGCGCTGGAACGGATGGGCGGCTCG CTGCTGGGCGCGCTGGCGGGGCTGGCGGCCATCCTGCTGCATGGCGTATCGCCCTATCTTTGCTACGCCTGGATGCTGCT GGTGGTGGCGCTAAGCAGTTGGCACGCCCAAGGGCGCGGCGGTTATCTGGCCTTGCTTACCGGCATCACGCTGGTGATCG TGGGCGGCCTGGGAGACGAGCCGATCAACGAGGCTTTGTGGCGCAGCTGCAATGTATTGATCGGCTCGCTGATCGGCATG GTCGCCGCCGCCACCCTGCCGCTGCGGGCGTTGGACAGCTGGCGCTTCCTGCTGGCGGACAATCTGCGCGAGGCGGCGCT GCTGTATAGCCGCATCGCGCGGCGCTTGCCGGTGGAGGGCGATGCGGCGCTGGACCAGTTCAACAGCCGCCTGGTCCGGC TGCGAGGACTGTTGCCCGCGGTGACGCAGGAGTCGGCGCTGACGCATCGCCAGCTGGATCAGGTGCAGCGCTGCCAGCGC AGCATCTGGACCCTGCTCGACCGGATGGACGAGGTGTCCGCGTCCACGCCTGCATTGGCGGAGGATCGCTCGCCGCGGCG CGCCATCGTCCGCACGCTGCTGCGCGCGGCCCATGCGCTGCGTTTCAACCAGCCGCAGCTGCTGGCCGATTCCTTGCCGG CCGCCGACAATCCGGCGCGGATGCGCGAGCCCACGCATTGCCACTGGCTGGTGGCGGAGTTGTCGTTGACGGTGGAGGAG CTGCGCGGCCAGTTGCAGGACATCCTGCCGCAACTGATCGCCGCGCCGCCGCCGGCGCGCAGCCTGGTGCGGCGGATGCG CGGCGCGCCGAGGAAAACCTGA
Upstream 100 bases:
>100_bases ACCGTCCCAACCGGGGTGTTCGGCGCGGACATGCGGGTCAGCCTGGTCAATGACGGGCCGGTCACCATCTGGCTGGACAG CCGGAATCCGGAGTAGGGCG
Downstream 100 bases:
>100_bases TCATCCAATCAGAAACGGCCCGGAGTTCCGGGCCGTTTTCATGCGGGAGTCTGCGCTTACAGGCCGACGATCTTGACCTT TTGGCCTGGTTGCAGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MGGRWQHPWRVLVVPYYLNRYARQVHVLRVALAFLFGLALVLASGIPHGGWMLVTILIVLGGVPHWGGVRRKALERMGGS LLGALAGLAAILLHGVSPYLCYAWMLLVVALSSWHAQGRGGYLALLTGITLVIVGGLGDEPINEALWRSCNVLIGSLIGM VAAATLPLRALDSWRFLLADNLREAALLYSRIARRLPVEGDAALDQFNSRLVRLRGLLPAVTQESALTHRQLDQVQRCQR SIWTLLDRMDEVSASTPALAEDRSPRRAIVRTLLRAAHALRFNQPQLLADSLPAADNPARMREPTHCHWLVAELSLTVEE LRGQLQDILPQLIAAPPPARSLVRRMRGAPRKT
Sequences:
>Translated_353_residues MGGRWQHPWRVLVVPYYLNRYARQVHVLRVALAFLFGLALVLASGIPHGGWMLVTILIVLGGVPHWGGVRRKALERMGGS LLGALAGLAAILLHGVSPYLCYAWMLLVVALSSWHAQGRGGYLALLTGITLVIVGGLGDEPINEALWRSCNVLIGSLIGM VAAATLPLRALDSWRFLLADNLREAALLYSRIARRLPVEGDAALDQFNSRLVRLRGLLPAVTQESALTHRQLDQVQRCQR SIWTLLDRMDEVSASTPALAEDRSPRRAIVRTLLRAAHALRFNQPQLLADSLPAADNPARMREPTHCHWLVAELSLTVEE LRGQLQDILPQLIAAPPPARSLVRRMRGAPRKT >Mature_352_residues GGRWQHPWRVLVVPYYLNRYARQVHVLRVALAFLFGLALVLASGIPHGGWMLVTILIVLGGVPHWGGVRRKALERMGGSL LGALAGLAAILLHGVSPYLCYAWMLLVVALSSWHAQGRGGYLALLTGITLVIVGGLGDEPINEALWRSCNVLIGSLIGMV AAATLPLRALDSWRFLLADNLREAALLYSRIARRLPVEGDAALDQFNSRLVRLRGLLPAVTQESALTHRQLDQVQRCQRS IWTLLDRMDEVSASTPALAEDRSPRRAIVRTLLRAAHALRFNQPQLLADSLPAADNPARMREPTHCHWLVAELSLTVEEL RGQLQDILPQLIAAPPPARSLVRRMRGAPRKT
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=300, Percent_Identity=31, Blast_Score=135, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 38917; Mature: 38786
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRWQHPWRVLVVPYYLNRYARQVHVLRVALAFLFGLALVLASGIPHGGWMLVTILIVL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GGVPHWGGVRRKALERMGGSLLGALAGLAAILLHGVSPYLCYAWMLLVVALSSWHAQGRG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC GYLALLTGITLVIVGGLGDEPINEALWRSCNVLIGSLIGMVAAATLPLRALDSWRFLLAD CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLREAALLYSRIARRLPVEGDAALDQFNSRLVRLRGLLPAVTQESALTHRQLDQVQRCQR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIWTLLDRMDEVSASTPALAEDRSPRRAIVRTLLRAAHALRFNQPQLLADSLPAADNPAR HHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHH MREPTHCHWLVAELSLTVEELRGQLQDILPQLIAAPPPARSLVRRMRGAPRKT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure GGRWQHPWRVLVVPYYLNRYARQVHVLRVALAFLFGLALVLASGIPHGGWMLVTILIVL CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GGVPHWGGVRRKALERMGGSLLGALAGLAAILLHGVSPYLCYAWMLLVVALSSWHAQGRG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC GYLALLTGITLVIVGGLGDEPINEALWRSCNVLIGSLIGMVAAATLPLRALDSWRFLLAD CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLREAALLYSRIARRLPVEGDAALDQFNSRLVRLRGLLPAVTQESALTHRQLDQVQRCQR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIWTLLDRMDEVSASTPALAEDRSPRRAIVRTLLRAAHALRFNQPQLLADSLPAADNPAR HHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHH MREPTHCHWLVAELSLTVEELRGQLQDILPQLIAAPPPARSLVRRMRGAPRKT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]