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The map label for this gene is hspC2 [H]

Identifier: 34496632

GI number: 34496632

Start: 1238992

End: 1239417

Strand: Reverse

Name: hspC2 [H]

Synonym: CV_1177

Alternate gene names: 34496632

Gene position: 1239417-1238992 (Counterclockwise)

Preceding gene: 34496633

Following gene: 34496629

Centisome position: 26.09

GC content: 63.15

Gene sequence:

>426_bases
ATGAGCATGCTGCCTGCCCGCCATAGCCTGTTTGACGAGTTTTTCCGCGATTTCACCCCGGGTTTCCTCGTCAAGCCGCT
GCACGGCGACGCGCTGCCGTCGCAGATCAAGATGGACGTCAAGGAAACCGGCGAGGCTTACCAGGTGGAGGCCGAACTGC
CCGGCGTCGGCAAGGAGGACATCCATGTCGAGATCGACGGCGCGCTGGTGACGATCAAGGCCGAGATCAAGCAGTTCGAC
CAGCAAGGCAAGGATGAGCGTTCGCTGCGCAGCGAACGCTATTACGGCCTGGTGTCGCGCAGCTTCCAGCTGCCGCAGGA
GATCGACCGCGACGCCGCCGGCGCCAAATATGAGAACGGCGTGCTGAGCCTGACCCTGCCCAAGCGCCGCAACAGCGGCG
TCGGCCAGCGGCTGAGGATAGAATAA

Upstream 100 bases:

>100_bases
AAATCCCGGTTCGGCGGCACTTGAATCCCGGGGGCACCGTCCCTATCTTCGACAACAGGACGGCATCCGCCGTAAGCCCA
TGAACTGAAAGGAGAACCAG

Downstream 100 bases:

>100_bases
GCGCCTCGCCCATGGCGGAAATGCAAAACGCGCCGGATAAACCGGCGCGTTTTGCATTGCCTGGCGCAGCGATCAGGCCA
GGATCTTGGACACGATCTCG

Product: small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSMLPARHSLFDEFFRDFTPGFLVKPLHGDALPSQIKMDVKETGEAYQVEAELPGVGKEDIHVEIDGALVTIKAEIKQFD
QQGKDERSLRSERYYGLVSRSFQLPQEIDRDAAGAKYENGVLSLTLPKRRNSGVGQRLRIE

Sequences:

>Translated_141_residues
MSMLPARHSLFDEFFRDFTPGFLVKPLHGDALPSQIKMDVKETGEAYQVEAELPGVGKEDIHVEIDGALVTIKAEIKQFD
QQGKDERSLRSERYYGLVSRSFQLPQEIDRDAAGAKYENGVLSLTLPKRRNSGVGQRLRIE
>Mature_140_residues
SMLPARHSLFDEFFRDFTPGFLVKPLHGDALPSQIKMDVKETGEAYQVEAELPGVGKEDIHVEIDGALVTIKAEIKQFDQ
QGKDERSLRSERYYGLVSRSFQLPQEIDRDAAGAKYENGVLSLTLPKRRNSGVGQRLRIE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15921; Mature: 15790

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLPARHSLFDEFFRDFTPGFLVKPLHGDALPSQIKMDVKETGEAYQVEAELPGVGKED
CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEECHHHCCCEEEEEECCCCCCCCC
IHVEIDGALVTIKAEIKQFDQQGKDERSLRSERYYGLVSRSFQLPQEIDRDAAGAKYENG
EEEEECCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
VLSLTLPKRRNSGVGQRLRIE
EEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
SMLPARHSLFDEFFRDFTPGFLVKPLHGDALPSQIKMDVKETGEAYQVEAELPGVGKED
CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEECHHHCCCEEEEEECCCCCCCCC
IHVEIDGALVTIKAEIKQFDQQGKDERSLRSERYYGLVSRSFQLPQEIDRDAAGAKYENG
EEEEECCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
VLSLTLPKRRNSGVGQRLRIE
EEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA