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The map label for this gene is fixN [H]

Identifier: 34496629

GI number: 34496629

Start: 1232527

End: 1233951

Strand: Reverse

Name: fixN [H]

Synonym: CV_1174

Alternate gene names: 34496629

Gene position: 1233951-1232527 (Counterclockwise)

Preceding gene: 34496632

Following gene: 34496628

Centisome position: 25.97

GC content: 62.32

Gene sequence:

>1425_bases
ATGGAAACGCAATCCACTTATAACTATAAGGTGGTGCGCCAATTTGCCATCATGACCGTAGTTTGGGGCATAGTCGGCAT
GTTGGTGGGCGTCATCATTGCGGCCCAGTTGGTGTGGCCGGAGCTCAATTTCGGGCCCTGGTTCCACTTCGGCCGCCTGC
GCCCCTTGCACACCAACGCCGTCATCTTCGCCTTCGGCGGCTGCGGTCTGTTCGCCACCTCCTACTACGTGGTGCAGCGC
ACCTGTAACGTCAGGCTGATTTCCGACAAGCTGGCCGCCGTCACCTTCTGGGGCTGGCAGCTGGTGATCGTGCTGGCGGC
CATCACGCTGCCGCTGGGCTTCACCACCTCCAAGGAATACGCTGAACTGGAATGGCCGATCAAGCTGCTGATCGCCGTGA
TCTGGGTGATCTACGCGATCGTGTTCTTCGGCACCATCGCCATCCGCAAGGTCAAGCACATCTACGTGGCCAACTGGTTC
TACGGCGCCTTCATCCTGGCCGTGGCCCTGCTGCACATCGTCAACTCCGCCTTCGTGCCGGTGACCATGTGGAAGTCCTA
TTCGGTCTACTCCGGCGCCGTCGACGCGATGGTGCAGTGGTGGTACGGCCACAACGCGGTGGGCTTCTTCCTGACCGCCG
CCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGGCCGGCCGCCCGGTCTACTCCTACCGCCTGTCCGTGGTGCAC
TTCTGGGCGCTGATCTTCACCTATATGTGGGCCGGTCCGCACCACCTGCACTACACCGCGCTGCCCGACTGGACCCAGTC
CGTCGGCATGGTGTTCTCGCTGATCCTGCTTGCGCCGTCCTGGGGCGGCATGATCAACGGCATCATGACCCTGTCCGGCG
CCTGGCATAAGCTGCGCACCGATCCGGTGCTGAAGTTCCTGGTGGTATCGCTGTCGTTCTACGGCATGTCCACCTTCGAA
GGCCCGATGATGTCGATCAAGACCGTCAACGCCCTCTCCCACTACACCGACTGGACCATCGGCCACGTGCACTCCGGCGC
GCTGGGCTGGGTGGGCTTCATCACCATCGGCTCGATGTACTACCTGATTCCGCGCCTGTTCGGCCGCGAAACCATGCACA
GCGTCAAGCTGATCGAGGCCCACTTCTGGCTGGCCACCGTCGGCGTGGTGCTCTACATCGCCGCGCTGTGGATCTCCGGC
GTGATGCAGGGCCTGATGTGGCGCGCGCTGAATCCGGACGGCACCCTGACCTACGCCTTCGTCGAAGCGGTGAAAGCCAC
CTACCCGTACCACACGGTGCGCCTGCTGGGCGGCTTCCTCTACCTCTCCGGCATGCTGCTGATGGCTTACAACACCTACC
GCACCGTCGTCGCAGGCCGCGCCGTCGATGCCAAGATTCCGGCCATCACCGCAGAAGCACATTAA

Upstream 100 bases:

>100_bases
CGGCTTGCTTTTCCAATTCTCCAGATAGGGATGAAGCCGGAAAGTTCAAGTCGCCTTGGTTTGTCATGTTCTGAGTTAGC
AACCTTGGAGAAAACCTTAA

Downstream 100 bases:

>100_bases
CAGGCGAGAATAATCATGGACAGAATCCAGAAACTGATTGAAGAGCATGTGGGCTGGCTGATCGTGCTGACCCTGCTGGT
GGTCAGCGTGGCCGGCCTGG

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
METQSTYNYKVVRQFAIMTVVWGIVGMLVGVIIAAQLVWPELNFGPWFHFGRLRPLHTNAVIFAFGGCGLFATSYYVVQR
TCNVRLISDKLAAVTFWGWQLVIVLAAITLPLGFTTSKEYAELEWPIKLLIAVIWVIYAIVFFGTIAIRKVKHIYVANWF
YGAFILAVALLHIVNSAFVPVTMWKSYSVYSGAVDAMVQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPVYSYRLSVVH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPVLKFLVVSLSFYGMSTFE
GPMMSIKTVNALSHYTDWTIGHVHSGALGWVGFITIGSMYYLIPRLFGRETMHSVKLIEAHFWLATVGVVLYIAALWISG
VMQGLMWRALNPDGTLTYAFVEAVKATYPYHTVRLLGGFLYLSGMLLMAYNTYRTVVAGRAVDAKIPAITAEAH

Sequences:

>Translated_474_residues
METQSTYNYKVVRQFAIMTVVWGIVGMLVGVIIAAQLVWPELNFGPWFHFGRLRPLHTNAVIFAFGGCGLFATSYYVVQR
TCNVRLISDKLAAVTFWGWQLVIVLAAITLPLGFTTSKEYAELEWPIKLLIAVIWVIYAIVFFGTIAIRKVKHIYVANWF
YGAFILAVALLHIVNSAFVPVTMWKSYSVYSGAVDAMVQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPVYSYRLSVVH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPVLKFLVVSLSFYGMSTFE
GPMMSIKTVNALSHYTDWTIGHVHSGALGWVGFITIGSMYYLIPRLFGRETMHSVKLIEAHFWLATVGVVLYIAALWISG
VMQGLMWRALNPDGTLTYAFVEAVKATYPYHTVRLLGGFLYLSGMLLMAYNTYRTVVAGRAVDAKIPAITAEAH
>Mature_474_residues
METQSTYNYKVVRQFAIMTVVWGIVGMLVGVIIAAQLVWPELNFGPWFHFGRLRPLHTNAVIFAFGGCGLFATSYYVVQR
TCNVRLISDKLAAVTFWGWQLVIVLAAITLPLGFTTSKEYAELEWPIKLLIAVIWVIYAIVFFGTIAIRKVKHIYVANWF
YGAFILAVALLHIVNSAFVPVTMWKSYSVYSGAVDAMVQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPVYSYRLSVVH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPVLKFLVVSLSFYGMSTFE
GPMMSIKTVNALSHYTDWTIGHVHSGALGWVGFITIGSMYYLIPRLFGRETMHSVKLIEAHFWLATVGVVLYIAALWISG
VMQGLMWRALNPDGTLTYAFVEAVKATYPYHTVRLLGGFLYLSGMLLMAYNTYRTVVAGRAVDAKIPAITAEAH

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 53334; Mature: 53334

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQSTYNYKVVRQFAIMTVVWGIVGMLVGVIIAAQLVWPELNFGPWFHFGRLRPLHTNA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCE
VIFAFGGCGLFATSYYVVQRTCNVRLISDKLAAVTFWGWQLVIVLAAITLPLGFTTSKEY
EEEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AELEWPIKLLIAVIWVIYAIVFFGTIAIRKVKHIYVANWFYGAFILAVALLHIVNSAFVP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VTMWKSYSVYSGAVDAMVQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPVYSYRLSVVH
EEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMVFSLILLAPSWGGMINGIMTLSGAWHKLRT
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCC
DPVLKFLVVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVGFITIGSMY
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHH
YLIPRLFGRETMHSVKLIEAHFWLATVGVVLYIAALWISGVMQGLMWRALNPDGTLTYAF
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VEAVKATYPYHTVRLLGGFLYLSGMLLMAYNTYRTVVAGRAVDAKIPAITAEAH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
>Mature Secondary Structure
METQSTYNYKVVRQFAIMTVVWGIVGMLVGVIIAAQLVWPELNFGPWFHFGRLRPLHTNA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCE
VIFAFGGCGLFATSYYVVQRTCNVRLISDKLAAVTFWGWQLVIVLAAITLPLGFTTSKEY
EEEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AELEWPIKLLIAVIWVIYAIVFFGTIAIRKVKHIYVANWFYGAFILAVALLHIVNSAFVP
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VTMWKSYSVYSGAVDAMVQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPVYSYRLSVVH
EEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FWALIFTYMWAGPHHLHYTALPDWTQSVGMVFSLILLAPSWGGMINGIMTLSGAWHKLRT
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCC
DPVLKFLVVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVGFITIGSMY
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHH
YLIPRLFGRETMHSVKLIEAHFWLATVGVVLYIAALWISGVMQGLMWRALNPDGTLTYAF
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VEAVKATYPYHTVRLLGGFLYLSGMLLMAYNTYRTVVAGRAVDAKIPAITAEAH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]