| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is envR [C]
Identifier: 34496532
GI number: 34496532
Start: 1124963
End: 1125604
Strand: Reverse
Name: envR [C]
Synonym: CV_1077
Alternate gene names: 34496532
Gene position: 1125604-1124963 (Counterclockwise)
Preceding gene: 34496533
Following gene: 34496517
Centisome position: 23.69
GC content: 61.68
Gene sequence:
>642_bases ATGCGCAAAAGCGGCCAATCGGAGACCTTCAACAAGATTGTCGAAGCGAGCCTGCAACTGTTCAATCAGGAAGGCGAGCG CGTCATCACCACCAACCACATCGCCGAGCGGATGAACATCAGCACCGGCAAGCTCTACTATCACTTCCGCAACAAGGAAG AGATCATCAACGAGCTCTACCAACGCTACGTGAAGGGCATGGCGGAGCAGCTGTCGGCCGCGCTCAGCCACAGCAACTCG ATCGAGGCGATGGTGATGGCGATGGAAAAGACGCTGCGCCACATCTGGAGCTTCCGCTTCCTGCCCAAGAGCCTGCCCAG CCTGTTCTACGTCAACCCGCAGCTGGAGGAAGAGCACCAGCAGCTGTCGCGCGGCCAGCTCAACGGCAAGCTGGGCCAGT TGTTCACCCGCTTGCGCGAGCAGGGCATGATCCTGGTCGACGACCAGCAGCTCGCCCATCTGGTCCAGCACTTCCAGATG GTGCAGACCGGCTGGATCAGCACCATCAGGCAGAACGCCAGCGCGGCGGAGCTGGACAAGCTGATCCAGCACGGCTGCCG CAGCCTGATGTATCTGCTGACGCCCTACGTCAGCCCCCGCTTCCAGTCGCCGTTCGAACGCGCCTGCGCGCGCTTCGCCT GA
Upstream 100 bases:
>100_bases CTGGATAGGCCTGGCGCTGGCGGCCGGCCTGCTCGCGGCCAGAAAAAACGGCTGAGCCGGCGCTCCGCGGCATCTCAGTT TCAGCGGGAAGAATCAAACC
Downstream 100 bases:
>100_bases TGCGGCCGCGCGGGACCGCCGCCAATGAACCCGCGCTAGAGCGCTAGGGCATAGCCCATAAAAAAAACACCCCGCGATCG CTCGCGGGGTGTTTTCGTTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator PhaD; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRKSGQSETFNKIVEASLQLFNQEGERVITTNHIAERMNISTGKLYYHFRNKEEIINELYQRYVKGMAEQLSAALSHSNS IEAMVMAMEKTLRHIWSFRFLPKSLPSLFYVNPQLEEEHQQLSRGQLNGKLGQLFTRLREQGMILVDDQQLAHLVQHFQM VQTGWISTIRQNASAAELDKLIQHGCRSLMYLLTPYVSPRFQSPFERACARFA
Sequences:
>Translated_213_residues MRKSGQSETFNKIVEASLQLFNQEGERVITTNHIAERMNISTGKLYYHFRNKEEIINELYQRYVKGMAEQLSAALSHSNS IEAMVMAMEKTLRHIWSFRFLPKSLPSLFYVNPQLEEEHQQLSRGQLNGKLGQLFTRLREQGMILVDDQQLAHLVQHFQM VQTGWISTIRQNASAAELDKLIQHGCRSLMYLLTPYVSPRFQSPFERACARFA >Mature_213_residues MRKSGQSETFNKIVEASLQLFNQEGERVITTNHIAERMNISTGKLYYHFRNKEEIINELYQRYVKGMAEQLSAALSHSNS IEAMVMAMEKTLRHIWSFRFLPKSLPSLFYVNPQLEEEHQQLSRGQLNGKLGQLFTRLREQGMILVDDQQLAHLVQHFQM VQTGWISTIRQNASAAELDKLIQHGCRSLMYLLTPYVSPRFQSPFERACARFA
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24753; Mature: 24753
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSGQSETFNKIVEASLQLFNQEGERVITTNHIAERMNISTGKLYYHFRNKEEIINELY CCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH QRYVKGMAEQLSAALSHSNSIEAMVMAMEKTLRHIWSFRFLPKSLPSLFYVNPQLEEEHQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHH QLSRGQLNGKLGQLFTRLREQGMILVDDQQLAHLVQHFQMVQTGWISTIRQNASAAELDK HHHHHHCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LIQHGCRSLMYLLTPYVSPRFQSPFERACARFA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MRKSGQSETFNKIVEASLQLFNQEGERVITTNHIAERMNISTGKLYYHFRNKEEIINELY CCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH QRYVKGMAEQLSAALSHSNSIEAMVMAMEKTLRHIWSFRFLPKSLPSLFYVNPQLEEEHQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHH QLSRGQLNGKLGQLFTRLREQGMILVDDQQLAHLVQHFQMVQTGWISTIRQNASAAELDK HHHHHHCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LIQHGCRSLMYLLTPYVSPRFQSPFERACARFA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA