| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496514
Identifier: 34496514
GI number: 34496514
Start: 1105436
End: 1106800
Strand: Reverse
Name: 34496514
Synonym: CV_1059
Alternate gene names: NA
Gene position: 1106800-1105436 (Counterclockwise)
Preceding gene: 34496515
Following gene: 34496510
Centisome position: 23.3
GC content: 32.97
Gene sequence:
>1365_bases ATGGAAAATCACGCCCTAACCTGCGAATGTGCTATTTGTAAAAATGAAAAAGATTTTGAGATATCAGAAGCACTTATTGA CGAAATTAACTCACAAAAGGTTACGATATTTGCAGGTGCAGGCATTAGCACAGAATCTCGCATCGTTCTCAAAAATACAT TTTATGATGATGTAGCACTAGAACTTTACAAAATCAATCCCCACTTAAGGGTCAAAGAACTTACATTTCCAAATCTAATG CAAGCTCTAAAATCACAGCCTAATGGCAGGATAAAATTATTGGAAATGATAACTAAAAGATTCTCTCTAATAAAATCATT TCCAGAACTCCGTAAAATGGCAACAAGATTCCATAGAGAATTAGGAACATTCTTCCCTATCAAGAATATCATCACAACCA ATTGGGATACATTTTTTGAGGAGGAATGTAAGGCAACCCCATTTGTATTTGACCAAGACATAGCATTCTGGGAAGCCGCA AAGAGAAGAGTATTAAAAATACACGGATCAGAAACCAATTTTGGATCGATTATTGCAGACGCCGATGATTACAAAAAATG CACAAAAAATTTAAGCAAGGGAATAATAGGAAGCAAACTAAAAGACATTCTTGCAACGCAAACAATAATATTCATTGGAT ACTCATTATCCGATTATGACTTTAACAGCATATATACTTTTGTTAGAAAACAAATGCGAGGTTTACACAAGCAAGCATAT ATAGTAACGCCATTTGAAAATGAGATAGAAAAGTTTAGAAAAATTGGGCTAATTCCGATTATTACGGATGGAACGTATTT TATTAAAAAATTAAAGCAACACCCTAAAATAGCCAGCCATTTTATAAAAGATTCATTTATAGAATTTTCCGCTCGGCTTT TATATAAAACAAACATTCAACACAACAGACTTCATAGTGAAATTAATTTTCTCAATCAACCTGATGCAATCTATTCGGCA TGTTATCAAGATGGATTAAAACACTCTCTAGAACGTGCAATTAATATGAGTGGGAACTCTGAATACTCTCATGCATGCGA ACTAAAAGAAATTATAAACAAATACGAAGATATAAAAAATAAAATAATTAATCGTGGCATTTTCGAAGACATTGCATATA TTGAAGGCTATATTAATGGACTAGTCGCCATTTATGAGCATGAAAAATTTACGGAAAATGACATCCCAATGTACTTTCAT TTTTCAGAAAGTGAAAATAGCCCAAGTATTACTGATATCGAGCATTACAAAGAAAAAATTCACTCACTCACAAAGAATGA TGAGTCATATCGCCATGCAGAAAAAGTTGTACAGCGATTAAAAGAAAATCCACTTTTAGAATATCATCACCCACCTTGGC TGTAA
Upstream 100 bases:
>100_bases TACATTGGGCTAAAGAGAAAGCCGCTCACTGCAAGGTGAGCGGCTTTTTTGCGACCTTTAAACGTAGCCTGTCCTATTTA TCCATCAGAAATGGAATAAC
Downstream 100 bases:
>100_bases GTCAGCTGAACCACGTAAAGCCCAAAGTTTACTACGCAATACCAATTAGTGTTGTGTCCGCTTCGCGGACAAATATTTAG GCGCCGGTTCCGCCCGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVALELYKINPHLRVKELTFPNLM QALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRELGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAA KRRVLKIHGSETNFGSIIADADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQHNRLHSEINFLNQPDAIYSA CYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKNKIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFH FSESENSPSITDIEHYKEKIHSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL
Sequences:
>Translated_454_residues MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVALELYKINPHLRVKELTFPNLM QALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRELGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAA KRRVLKIHGSETNFGSIIADADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQHNRLHSEINFLNQPDAIYSA CYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKNKIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFH FSESENSPSITDIEHYKEKIHSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL >Mature_454_residues MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVALELYKINPHLRVKELTFPNLM QALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRELGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAA KRRVLKIHGSETNFGSIIADADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQHNRLHSEINFLNQPDAIYSA CYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKNKIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFH FSESENSPSITDIEHYKEKIHSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52931; Mature: 52931
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVAL CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEE ELYKINPHLRVKELTFPNLMQALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRE EEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAAKRRVLKIHGSETNFGSIIAD HHCCCCHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHHHCCCEEEEECCCCCCCCEEEC ADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY CHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCEE IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQ EECCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC HNRLHSEINFLNQPDAIYSACYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFHFSESENSPSITDIEHYKEKI HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH HSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL HHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVAL CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEE ELYKINPHLRVKELTFPNLMQALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRE EEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAAKRRVLKIHGSETNFGSIIAD HHCCCCHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHHHCCCEEEEECCCCCCCCEEEC ADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY CHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCEE IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQ EECCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC HNRLHSEINFLNQPDAIYSACYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFHFSESENSPSITDIEHYKEKI HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH HSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL HHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA