| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496499
Identifier: 34496499
GI number: 34496499
Start: 1093514
End: 1095013
Strand: Reverse
Name: 34496499
Synonym: CV_1044
Alternate gene names: NA
Gene position: 1095013-1093514 (Counterclockwise)
Preceding gene: 34496500
Following gene: 34496498
Centisome position: 23.05
GC content: 67.73
Gene sequence:
>1500_bases ATGAACACGCCGCTCCAGGTGCTGACGCGCCCGTTCGCGATCGAGCCGGTGACCAGCGTCATGCTGCCCGACGGGATCTT CGACAACGCGATCTACCATTTGCGCATCGCCGCGCATTTCACCAACACCTCGGCCAGTGCGCTGAGCAACGTCACCGTCT ATCTGGAAAGCGTCGGCGATCCCGGCATCGCCCCGACGGCGCACACCTTCACCTTCCCCGCCATTCCCGCCGGCGGCACC GTGATGCTGGCCTGGGACGCGGACTTCCAGCACGCGGCGCCGGGCAAACCGCTGGTGAGCTTCGTCGCGCGCGCGGACGG CTTCGCGGCCCAACGCTCCATCCAGCAGATATTCGTGTCGCAAACCCGCTTCGACAGCGCCAGCAACACCTATACCTGCA CCGTCGAGGAAGGCACGCTGACCATTTCCAACCTCCAGGGCCACTCGCCAGGCAAAGCCTGGGGAGAGCCGACAGGCAAC GGCAAGGAATGCCGCTGCCCGCCCCGATTCGGCCCGATGGTGCCCACCGGCCTGACCATGGCCTGGAAACCGAACCCGGC CTATACCGGCACGCACGCCGAGCTGCCGTTCTCCGATCCTTGGTGGAAGGTGCTGGCCATCATCGTCGCCGTCATCGCCG CGCTGGTGGCCGTGATCGCGGCGGCAGTCGGCGGGGGCAAGGCCAATTTCAGCGTCGGCGGCTCGGTGGAGGAGACCGAC CCCAGCGTTCACTGCTGCTCGCTGAAAGGGGCGGGATCGGGCGCGCCGGAATTCACCGTCGCCGGCGTGGCTTCCGCCAT CGCCTCCGGCGCGATCGCGGTGGCCTGCTCGGACGAAGCCGATCCGTTCTGGCGCGGGCAGGCGGCCACGCCGCCGGCGG CCGGCGAGACCACGGTGGCGGAGCGGGTGGTCGCCAAGTGGAAAATGCTGGAAGCGCCGGTGGCGGGCAAAGCGTACAAG ACCGACGTGTCCTGGACTTACGAGCGCTTCACCACCGGCAAGACCTATCACCATTCGGTGACGGAAACCCAGGTCAACGT GCATGCCGCCGGCCCGGTGAAAGTGGAGACCCCCGACGTGGTCCACGCCTTCCAGCCCTTGTGGGTGCGGGCCGCTTTCC AGCGCCAGGACGGCTCGCTGTTCAAGGGCAGCGACCTGTATTCCTTCGCCCTGTTCGAAGCGCCGCAGGGGTTGTACTTC GTCGCGCCGCTGACCGACGACGGCCTGGGCTTCGATCCTGGCGCCAACGACGGCACCTATGCCGGCAGCCTGGACCTGGA GCGCGCCTACCGGCTGCTGCTGCAGCAGCACCAGGACGTGCACGGCGTCTGGCGGGTGTTCGTCTTCGCCCAGGATGTGA ACCTGACCAAGCCGGGCACGCCGCCGCACATCGCGGCCCAGCACATCGGCGGCTTCTTCGTGGCCAGCGCGATCGAGATC ACCTTCGACGACAGCCTGCCTTGCCCGCTCAAGGCCCAGTCGACGATCACCGTGGTCTGA
Upstream 100 bases:
>100_bases ACCACTACCAGCTGCTGCACATCGTCGAGCATGACGACGCCGGCAAGCCGCTGGGCGGCGTCAGCTATGTGGTCATTCCG CAAGGCAAGGAGAACAGACT
Downstream 100 bases:
>100_bases GGCCGCGCCGGCTGGACATCGCCTGATCGCCCATGCCGGCAAACGTAGGGCGGCCCGCCCTGGCCGCCCTTTTTATTCAT GCTTTGGCCATGCGAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MNTPLQVLTRPFAIEPVTSVMLPDGIFDNAIYHLRIAAHFTNTSASALSNVTVYLESVGDPGIAPTAHTFTFPAIPAGGT VMLAWDADFQHAAPGKPLVSFVARADGFAAQRSIQQIFVSQTRFDSASNTYTCTVEEGTLTISNLQGHSPGKAWGEPTGN GKECRCPPRFGPMVPTGLTMAWKPNPAYTGTHAELPFSDPWWKVLAIIVAVIAALVAVIAAAVGGGKANFSVGGSVEETD PSVHCCSLKGAGSGAPEFTVAGVASAIASGAIAVACSDEADPFWRGQAATPPAAGETTVAERVVAKWKMLEAPVAGKAYK TDVSWTYERFTTGKTYHHSVTETQVNVHAAGPVKVETPDVVHAFQPLWVRAAFQRQDGSLFKGSDLYSFALFEAPQGLYF VAPLTDDGLGFDPGANDGTYAGSLDLERAYRLLLQQHQDVHGVWRVFVFAQDVNLTKPGTPPHIAAQHIGGFFVASAIEI TFDDSLPCPLKAQSTITVV
Sequences:
>Translated_499_residues MNTPLQVLTRPFAIEPVTSVMLPDGIFDNAIYHLRIAAHFTNTSASALSNVTVYLESVGDPGIAPTAHTFTFPAIPAGGT VMLAWDADFQHAAPGKPLVSFVARADGFAAQRSIQQIFVSQTRFDSASNTYTCTVEEGTLTISNLQGHSPGKAWGEPTGN GKECRCPPRFGPMVPTGLTMAWKPNPAYTGTHAELPFSDPWWKVLAIIVAVIAALVAVIAAAVGGGKANFSVGGSVEETD PSVHCCSLKGAGSGAPEFTVAGVASAIASGAIAVACSDEADPFWRGQAATPPAAGETTVAERVVAKWKMLEAPVAGKAYK TDVSWTYERFTTGKTYHHSVTETQVNVHAAGPVKVETPDVVHAFQPLWVRAAFQRQDGSLFKGSDLYSFALFEAPQGLYF VAPLTDDGLGFDPGANDGTYAGSLDLERAYRLLLQQHQDVHGVWRVFVFAQDVNLTKPGTPPHIAAQHIGGFFVASAIEI TFDDSLPCPLKAQSTITVV >Mature_499_residues MNTPLQVLTRPFAIEPVTSVMLPDGIFDNAIYHLRIAAHFTNTSASALSNVTVYLESVGDPGIAPTAHTFTFPAIPAGGT VMLAWDADFQHAAPGKPLVSFVARADGFAAQRSIQQIFVSQTRFDSASNTYTCTVEEGTLTISNLQGHSPGKAWGEPTGN GKECRCPPRFGPMVPTGLTMAWKPNPAYTGTHAELPFSDPWWKVLAIIVAVIAALVAVIAAAVGGGKANFSVGGSVEETD PSVHCCSLKGAGSGAPEFTVAGVASAIASGAIAVACSDEADPFWRGQAATPPAAGETTVAERVVAKWKMLEAPVAGKAYK TDVSWTYERFTTGKTYHHSVTETQVNVHAAGPVKVETPDVVHAFQPLWVRAAFQRQDGSLFKGSDLYSFALFEAPQGLYF VAPLTDDGLGFDPGANDGTYAGSLDLERAYRLLLQQHQDVHGVWRVFVFAQDVNLTKPGTPPHIAAQHIGGFFVASAIEI TFDDSLPCPLKAQSTITVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52873; Mature: 52873
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPLQVLTRPFAIEPVTSVMLPDGIFDNAIYHLRIAAHFTNTSASALSNVTVYLESVGD CCCCHHHHCCCCEECCHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHCEEEEEEEECCC PGIAPTAHTFTFPAIPAGGTVMLAWDADFQHAAPGKPLVSFVARADGFAAQRSIQQIFVS CCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH QTRFDSASNTYTCTVEEGTLTISNLQGHSPGKAWGEPTGNGKECRCPPRFGPMVPTGLTM HHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE AWKPNPAYTGTHAELPFSDPWWKVLAIIVAVIAALVAVIAAAVGGGKANFSVGGSVEETD EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC PSVHCCSLKGAGSGAPEFTVAGVASAIASGAIAVACSDEADPFWRGQAATPPAAGETTVA CCEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH ERVVAKWKMLEAPVAGKAYKTDVSWTYERFTTGKTYHHSVTETQVNVHAAGPVKVETPDV HHHHHHHHHHCCCCCCCEEECCCCEEEEHCCCCCEEECCCCEEEEEEEECCCEEECCCHH VHAFQPLWVRAAFQRQDGSLFKGSDLYSFALFEAPQGLYFVAPLTDDGLGFDPGANDGTY HHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCE AGSLDLERAYRLLLQQHQDVHGVWRVFVFAQDVNLTKPGTPPHIAAQHIGGFFVASAIEI ECCCCHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEE TFDDSLPCPLKAQSTITVV EECCCCCCCCCCCCEEEEC >Mature Secondary Structure MNTPLQVLTRPFAIEPVTSVMLPDGIFDNAIYHLRIAAHFTNTSASALSNVTVYLESVGD CCCCHHHHCCCCEECCHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHCEEEEEEEECCC PGIAPTAHTFTFPAIPAGGTVMLAWDADFQHAAPGKPLVSFVARADGFAAQRSIQQIFVS CCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH QTRFDSASNTYTCTVEEGTLTISNLQGHSPGKAWGEPTGNGKECRCPPRFGPMVPTGLTM HHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE AWKPNPAYTGTHAELPFSDPWWKVLAIIVAVIAALVAVIAAAVGGGKANFSVGGSVEETD EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC PSVHCCSLKGAGSGAPEFTVAGVASAIASGAIAVACSDEADPFWRGQAATPPAAGETTVA CCEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH ERVVAKWKMLEAPVAGKAYKTDVSWTYERFTTGKTYHHSVTETQVNVHAAGPVKVETPDV HHHHHHHHHHCCCCCCCEEECCCCEEEEHCCCCCEEECCCCEEEEEEEECCCEEECCCHH VHAFQPLWVRAAFQRQDGSLFKGSDLYSFALFEAPQGLYFVAPLTDDGLGFDPGANDGTY HHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCE AGSLDLERAYRLLLQQHQDVHGVWRVFVFAQDVNLTKPGTPPHIAAQHIGGFFVASAIEI ECCCCHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEE TFDDSLPCPLKAQSTITVV EECCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA