| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496500
Identifier: 34496500
GI number: 34496500
Start: 1095010
End: 1095897
Strand: Reverse
Name: 34496500
Synonym: CV_1045
Alternate gene names: NA
Gene position: 1095897-1095010 (Counterclockwise)
Preceding gene: 34496502
Following gene: 34496499
Centisome position: 23.07
GC content: 68.02
Gene sequence:
>888_bases ATGTCTGCTCATATCCTGATACGGGACGGCTCTCCCCACTGGTGGCTCAGCACCGATGTCTGGGTCGTGCCCGGCAACGA CCCCAACGGCGCGCCCGGCGCGCCGCTTTCCGGCCAGAAAGCCTATGTCTGGGCCCATGTCGACAATATCGGCGACGCGG ACGCGCAAAACGTCCGCATCGATTTCTACTGGGCCAATCCGGCCGGGCAGATGACGGCCGGCGCGGTCAACTACATCGGC GCCGGCTACGCCGACCTGCCCGCGGACCCGAAGGAAGCGATGGGCCAGGACGTGCTGTGCCTGGTGCCCTGGCAGGTGCA GATCGTCAACGATGGCCACGAGTGCCTGCTGGCCGTGGCGCATGGGACGGGCGACAGCAATCCGATTCCCGACCCGCTGC CGGCCTCCTTCAGCTTCGATCCGCCGGCCCACGACCAGATCGCCCAGCGAAACCTCACCGTGCTGGACGCCAGCAAGATG GCGCCGATGCTGCGCATCGCGGTCAATGGCCTGCCGCGCCAGGACAAGCGGGTGAGGCTGACAGCGGAGTTCGGCGGAGA GCTGGACCAACGCCAGCTGCAGCGCCTGGGACTCGCCCGGCTGCAGCTGCGGCCCGCGCCCAAGCCGGAAGTGCAAGTGC GCCTGAGCCTGGAGCCGTCCTGCGGCGGCAAAAGCGCCGGGGAGAAGGCGAGCGATGCCCGCGTGCCCAGCCTGGCTGTC AGCGTGCCGCGCGGCGCGACGGTGCCGGTCTACCTCGACATCCAGGCCAGCCAGCTGCATCCCGACCACTACCAGCTGCT GCACATCGTCGAGCATGACGACGCCGGCAAGCCGCTGGGCGGCGTCAGCTATGTGGTCATTCCGCAAGGCAAGGAGAACA GACTATGA
Upstream 100 bases:
>100_bases CCTGAGCCGCCTTCCATTCCGCGATAGCCTGACGCGTTCCTTTACGCGCCGATTTCAGAGGGGATGTTTCCATCCATCTT TTGAGCGCGAAAGGACAACC
Downstream 100 bases:
>100_bases ACACGCCGCTCCAGGTGCTGACGCGCCCGTTCGCGATCGAGCCGGTGACCAGCGTCATGCTGCCCGACGGGATCTTCGAC AACGCGATCTACCATTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSAHILIRDGSPHWWLSTDVWVVPGNDPNGAPGAPLSGQKAYVWAHVDNIGDADAQNVRIDFYWANPAGQMTAGAVNYIG AGYADLPADPKEAMGQDVLCLVPWQVQIVNDGHECLLAVAHGTGDSNPIPDPLPASFSFDPPAHDQIAQRNLTVLDASKM APMLRIAVNGLPRQDKRVRLTAEFGGELDQRQLQRLGLARLQLRPAPKPEVQVRLSLEPSCGGKSAGEKASDARVPSLAV SVPRGATVPVYLDIQASQLHPDHYQLLHIVEHDDAGKPLGGVSYVVIPQGKENRL
Sequences:
>Translated_295_residues MSAHILIRDGSPHWWLSTDVWVVPGNDPNGAPGAPLSGQKAYVWAHVDNIGDADAQNVRIDFYWANPAGQMTAGAVNYIG AGYADLPADPKEAMGQDVLCLVPWQVQIVNDGHECLLAVAHGTGDSNPIPDPLPASFSFDPPAHDQIAQRNLTVLDASKM APMLRIAVNGLPRQDKRVRLTAEFGGELDQRQLQRLGLARLQLRPAPKPEVQVRLSLEPSCGGKSAGEKASDARVPSLAV SVPRGATVPVYLDIQASQLHPDHYQLLHIVEHDDAGKPLGGVSYVVIPQGKENRL >Mature_294_residues SAHILIRDGSPHWWLSTDVWVVPGNDPNGAPGAPLSGQKAYVWAHVDNIGDADAQNVRIDFYWANPAGQMTAGAVNYIGA GYADLPADPKEAMGQDVLCLVPWQVQIVNDGHECLLAVAHGTGDSNPIPDPLPASFSFDPPAHDQIAQRNLTVLDASKMA PMLRIAVNGLPRQDKRVRLTAEFGGELDQRQLQRLGLARLQLRPAPKPEVQVRLSLEPSCGGKSAGEKASDARVPSLAVS VPRGATVPVYLDIQASQLHPDHYQLLHIVEHDDAGKPLGGVSYVVIPQGKENRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31738; Mature: 31607
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHILIRDGSPHWWLSTDVWVVPGNDPNGAPGAPLSGQKAYVWAHVDNIGDADAQNVRI CCEEEEEECCCCCEEEECEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE DFYWANPAGQMTAGAVNYIGAGYADLPADPKEAMGQDVLCLVPWQVQIVNDGHECLLAVA EEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCEEEEECEEEEEEECCCEEEEEEE HGTGDSNPIPDPLPASFSFDPPAHDQIAQRNLTVLDASKMAPMLRIAVNGLPRQDKRVRL ECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEHHHHCCEEEEEECCCCCCCCEEEE TAEFGGELDQRQLQRLGLARLQLRPAPKPEVQVRLSLEPSCGGKSAGEKASDARVPSLAV EHHHCCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEE SVPRGATVPVYLDIQASQLHPDHYQLLHIVEHDDAGKPLGGVSYVVIPQGKENRL ECCCCCEEEEEEEEEHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure SAHILIRDGSPHWWLSTDVWVVPGNDPNGAPGAPLSGQKAYVWAHVDNIGDADAQNVRI CEEEEEECCCCCEEEECEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE DFYWANPAGQMTAGAVNYIGAGYADLPADPKEAMGQDVLCLVPWQVQIVNDGHECLLAVA EEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCEEEEECEEEEEEECCCEEEEEEE HGTGDSNPIPDPLPASFSFDPPAHDQIAQRNLTVLDASKMAPMLRIAVNGLPRQDKRVRL ECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEHHHHCCEEEEEECCCCCCCCEEEE TAEFGGELDQRQLQRLGLARLQLRPAPKPEVQVRLSLEPSCGGKSAGEKASDARVPSLAV EHHHCCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEE SVPRGATVPVYLDIQASQLHPDHYQLLHIVEHDDAGKPLGGVSYVVIPQGKENRL ECCCCCEEEEEEEEEHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA