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The map label for this gene is 34496162

Identifier: 34496162

GI number: 34496162

Start: 731625

End: 733259

Strand: Reverse

Name: 34496162

Synonym: CV_0707

Alternate gene names: NA

Gene position: 733259-731625 (Counterclockwise)

Preceding gene: 34496163

Following gene: 34496154

Centisome position: 15.43

GC content: 70.03

Gene sequence:

>1635_bases
ATGAAGCACTCGATCAATCGGCTGGCGCTCGCCATCGCCGCCGCGCTTGCCAGCCAGGCCGCCGCCACCGCGCCGCTCCA
GCCCATCCGCAACCACGCCTTCGCCCAATCCTGCCAGGCGCTGTGGGGCAAGGAAACCGCGCGCAGCCGCTGGGTGAAGG
ACGACGGCCAGGGCGGCCTCGCCTACGCGCCGCTGAACGGCAACGGCGACCACATCATGGACTTCTCCAGCGCCGGCTAT
ATGGGCGGCGGCGTCGCGCTGCCGACGGCGCCGGTGAAGGCGACGGTCAAGCCCAGCGGCAAGGCGGCAGACGACCTCGC
CAACATCCAGGCCGCCATCGCCAAGGTGGCGGCGCTGCCGGCGGTGAACGGCGTACGCGGCGCGGTGCTGCTCGCGCCCG
GCGTCTTCCTGCTCGAAGCGCCGATCCAGCTGGCCAGCGACGGCGTGGTGCTGCGCGGCAGCGGGTCCGGCGCCGGCGGC
ACCGTGCTGAAGGCGCAAGGCGCCGGCCACGCGATGCTGAGCCTGGGCGGCGCCGGCGCCAGCCTGACGCCGATCGGATC
CGCCGCCGCCATCGCCGACGGCTATCTGCCGTCCGGCGGCAGCGTCATCCATGTTTCCAACCCGTCCGGCTTCAAGCCCG
GCGACGCGGTGATGATCCGCCGCCGCGCCAGCGCCGAGTGGATTCATGTGATGGACATGGACCAGCTGGTCCGCGACGGC
AAACCGCAAACCTGGATCAACGCCGGCAACAACAACGAAATTTGGCTGCGCACCGTCGCCGCGGTCAGCGGCAACCAACT
GACGCTGGACATCCCGCTGTCCGATTCCTTCGACAGCGGCTATCTGGGGACGAATGGCGGCAGCGTGCAGAAATACGCGG
CCAGCGGCATCGCCAGCCAGATCGGCGCCGAGCGCCTGGCGCTGGAAGGCCTGCCCAACGGCAGCGGCGCCGACTACGGC
GTGGCCAACCTGGACAATCTGAGCGACGGCTGGCTCAACGACATCCAGGCGCACAACTTCACCAACGGCGTGGTGGTCGG
CAAGCAAGGCCGGCGGCTGACGCTGGAACAAGTGGCGCTCAGCCACGACCACAACCATGTCGACTGCTCCGGCGCCAAGG
CATTCGAGTTCAGCATCGCCGGCAGCCAGGTGCTGGTGGACCGCAGTTCGTCCATCGGCGGCAAGAAGTCGTTCTACTAC
GCCACCCAGGCCCAGGCCGGCGGGCCCAACGTACTGCTGAACTTCACCGGCCGCGCCGAAGCCTGCGGCAATATCGAGCC
GCACCAGCGCTGGGCCACCGGCCTGCTGGTGGACAACGCCGACATCAGCGGCGCCATCGCGCTGGGCAACCGCGGCGCCG
ACGGCAGCGGCCACGGCTGGAGCATCGGTTGGGGCGTGGCGTGGAATGCCAAGGCGGATCAACTGGCCATCGCCGCGCCG
CCGGGCGCGACCAACTGGGCGATAGGCAGCAGCGGCGCGCTGACGCCCGATGTGCCGGACGCGCAAGGCGTGCCGGTGCC
GCCCAAACTGGGAAGCGTCGACTCGGCCAACGTCCGCGTCGGCCCGGACAGCCTGTACCTGATGCAGCTGTGCCAGCGGC
TGGGCCCGCAGGCGGTGAAGAACATCGGCTATTGA

Upstream 100 bases:

>100_bases
ACTGCGTGCTATCAATATGCCTTCAAAATAATCAGCCCGGCCCGGCCGGCGGCGCCTCCGCTTTCCATTCAATCTCAACG
CAGACAGGAAATCTTCAGCC

Downstream 100 bases:

>100_bases
TGGACAGCTGAAACGAAAAGAGGCCCGCAGGGCCTCTTTGGCGATGCGGACGCGCCTTTGCTCAATACAATTCTTCGTTT
TCCCACATCGCCCTCAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Hemagglutinin-Related Protein; F5/8 Type C Domain Protein

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MKHSINRLALAIAAALASQAAATAPLQPIRNHAFAQSCQALWGKETARSRWVKDDGQGGLAYAPLNGNGDHIMDFSSAGY
MGGGVALPTAPVKATVKPSGKAADDLANIQAAIAKVAALPAVNGVRGAVLLAPGVFLLEAPIQLASDGVVLRGSGSGAGG
TVLKAQGAGHAMLSLGGAGASLTPIGSAAAIADGYLPSGGSVIHVSNPSGFKPGDAVMIRRRASAEWIHVMDMDQLVRDG
KPQTWINAGNNNEIWLRTVAAVSGNQLTLDIPLSDSFDSGYLGTNGGSVQKYAASGIASQIGAERLALEGLPNGSGADYG
VANLDNLSDGWLNDIQAHNFTNGVVVGKQGRRLTLEQVALSHDHNHVDCSGAKAFEFSIAGSQVLVDRSSSIGGKKSFYY
ATQAQAGGPNVLLNFTGRAEACGNIEPHQRWATGLLVDNADISGAIALGNRGADGSGHGWSIGWGVAWNAKADQLAIAAP
PGATNWAIGSSGALTPDVPDAQGVPVPPKLGSVDSANVRVGPDSLYLMQLCQRLGPQAVKNIGY

Sequences:

>Translated_544_residues
MKHSINRLALAIAAALASQAAATAPLQPIRNHAFAQSCQALWGKETARSRWVKDDGQGGLAYAPLNGNGDHIMDFSSAGY
MGGGVALPTAPVKATVKPSGKAADDLANIQAAIAKVAALPAVNGVRGAVLLAPGVFLLEAPIQLASDGVVLRGSGSGAGG
TVLKAQGAGHAMLSLGGAGASLTPIGSAAAIADGYLPSGGSVIHVSNPSGFKPGDAVMIRRRASAEWIHVMDMDQLVRDG
KPQTWINAGNNNEIWLRTVAAVSGNQLTLDIPLSDSFDSGYLGTNGGSVQKYAASGIASQIGAERLALEGLPNGSGADYG
VANLDNLSDGWLNDIQAHNFTNGVVVGKQGRRLTLEQVALSHDHNHVDCSGAKAFEFSIAGSQVLVDRSSSIGGKKSFYY
ATQAQAGGPNVLLNFTGRAEACGNIEPHQRWATGLLVDNADISGAIALGNRGADGSGHGWSIGWGVAWNAKADQLAIAAP
PGATNWAIGSSGALTPDVPDAQGVPVPPKLGSVDSANVRVGPDSLYLMQLCQRLGPQAVKNIGY
>Mature_544_residues
MKHSINRLALAIAAALASQAAATAPLQPIRNHAFAQSCQALWGKETARSRWVKDDGQGGLAYAPLNGNGDHIMDFSSAGY
MGGGVALPTAPVKATVKPSGKAADDLANIQAAIAKVAALPAVNGVRGAVLLAPGVFLLEAPIQLASDGVVLRGSGSGAGG
TVLKAQGAGHAMLSLGGAGASLTPIGSAAAIADGYLPSGGSVIHVSNPSGFKPGDAVMIRRRASAEWIHVMDMDQLVRDG
KPQTWINAGNNNEIWLRTVAAVSGNQLTLDIPLSDSFDSGYLGTNGGSVQKYAASGIASQIGAERLALEGLPNGSGADYG
VANLDNLSDGWLNDIQAHNFTNGVVVGKQGRRLTLEQVALSHDHNHVDCSGAKAFEFSIAGSQVLVDRSSSIGGKKSFYY
ATQAQAGGPNVLLNFTGRAEACGNIEPHQRWATGLLVDNADISGAIALGNRGADGSGHGWSIGWGVAWNAKADQLAIAAP
PGATNWAIGSSGALTPDVPDAQGVPVPPKLGSVDSANVRVGPDSLYLMQLCQRLGPQAVKNIGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55482; Mature: 55482

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSINRLALAIAAALASQAAATAPLQPIRNHAFAQSCQALWGKETARSRWVKDDGQGGL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCE
AYAPLNGNGDHIMDFSSAGYMGGGVALPTAPVKATVKPSGKAADDLANIQAAIAKVAALP
EEEECCCCCCEEEEECCCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
AVNGVRGAVLLAPGVFLLEAPIQLASDGVVLRGSGSGAGGTVLKAQGAGHAMLSLGGAGA
CCCCCCCEEEECCCEEEEECCHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEEECCCCC
SLTPIGSAAAIADGYLPSGGSVIHVSNPSGFKPGDAVMIRRRASAEWIHVMDMDQLVRDG
CCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHCC
KPQTWINAGNNNEIWLRTVAAVSGNQLTLDIPLSDSFDSGYLGTNGGSVQKYAASGIASQ
CCCEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IGAERLALEGLPNGSGADYGVANLDNLSDGWLNDIQAHNFTNGVVVGKQGRRLTLEQVAL
HCHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCEEEHHHHHH
SHDHNHVDCSGAKAFEFSIAGSQVLVDRSSSIGGKKSFYYATQAQAGGPNVLLNFTGRAE
HCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCC
ACGNIEPHQRWATGLLVDNADISGAIALGNRGADGSGHGWSIGWGVAWNAKADQLAIAAP
CCCCCCHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEECC
PGATNWAIGSSGALTPDVPDAQGVPVPPKLGSVDSANVRVGPDSLYLMQLCQRLGPQAVK
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCHHHHH
NIGY
HCCC
>Mature Secondary Structure
MKHSINRLALAIAAALASQAAATAPLQPIRNHAFAQSCQALWGKETARSRWVKDDGQGGL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCE
AYAPLNGNGDHIMDFSSAGYMGGGVALPTAPVKATVKPSGKAADDLANIQAAIAKVAALP
EEEECCCCCCEEEEECCCCCCCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
AVNGVRGAVLLAPGVFLLEAPIQLASDGVVLRGSGSGAGGTVLKAQGAGHAMLSLGGAGA
CCCCCCCEEEECCCEEEEECCHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEEECCCCC
SLTPIGSAAAIADGYLPSGGSVIHVSNPSGFKPGDAVMIRRRASAEWIHVMDMDQLVRDG
CCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHCC
KPQTWINAGNNNEIWLRTVAAVSGNQLTLDIPLSDSFDSGYLGTNGGSVQKYAASGIASQ
CCCEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IGAERLALEGLPNGSGADYGVANLDNLSDGWLNDIQAHNFTNGVVVGKQGRRLTLEQVAL
HCHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCEEEHHHHHH
SHDHNHVDCSGAKAFEFSIAGSQVLVDRSSSIGGKKSFYYATQAQAGGPNVLLNFTGRAE
HCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCC
ACGNIEPHQRWATGLLVDNADISGAIALGNRGADGSGHGWSIGWGVAWNAKADQLAIAAP
CCCCCCHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEECC
PGATNWAIGSSGALTPDVPDAQGVPVPPKLGSVDSANVRVGPDSLYLMQLCQRLGPQAVK
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCHHHHH
NIGY
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA