| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fecR [C]
Identifier: 339717974
GI number: 339717974
Start: 1350881
End: 1351855
Strand: Direct
Name: fecR [C]
Synonym: NA
Alternate gene names: 339717974
Gene position: 1350881-1351855 (Clockwise)
Preceding gene: 339717973
Following gene: 238024462
Centisome position: 47.78
GC content: 72.51
Gene sequence:
>975_bases ATGCTTTCTGAACCCTTGAACGCCTCACGCGGTGCCCGCGCGCCCGATTCCGCCATGCGCGAGGCCGTGCAATGGGAGGT CCGGCTGCGGGCCGGGGATGTCACGCGCGAGGAACGCGATCGATTCGAGGCGTGGCGCCGTGCCGATCCCGCTCACGACC AGGCGTGGACGCGGCTTCAGCAAGGGCTGGCGCGGTTTTCCCCGCTGCAGGCAGCCTCCGGCGCCGCGGTGCGCAGCGCG TTGAGCGAACCCTCCCATGCGAGACGCCGCCTGCTCAAGGCGGGGGGCGCGCTCAGCGCGCTGGCCTTGGCCGCGGTCGG CACGCGCGAGCTGGTGGGCCGCTACGCCCTGGACGCCGATTACCACAACGCGGGCCTGGCGCCCCAGGTGGTCGCGCTGA ACGACGGCGCGCCGATGACGCTCGGGGCCTCGGCTCGCGTCTATGCGACGGACGCCGCCGCGGGCCATGACGTCTACCTC GCGTCCGGCCAGATCCTCACCAATCCGGTCACGACGAGCCGCATCCCGCTGGTGGTGCGCACCCGCGACGGCAGCGCGGC GACGGCCAGCGCACGGCTCAGCGTCGACGCGCTGCGCTATCACACCGTGGTGGCGGTGCAGGGCGGCGAGGCCACCCTGG CCACGCCGGACGGCGGCAGCCTGCGTGTCGACGGCGGTTCGGCCTGGTCGATCACCGCACGGCGCATCGCCCGCATGCCC GAGACCGCCGAGGATATCTTCGCATGGAAGCGCGGCATGCTGGTGGTGCTCGACCGCCCCGTGCCCGACATCATCGAGAC GCTGGGCCGCTACTACAGCGGCTACATCCGGTTTCCGCAGGAAGCGCTCTCGCGCCGGGTCAGCGGCGTGTTCGCGCTCA ATGACGCCGAGGCGGCGCTGCGCCAGCTCGCCAGCGGCCTGGGGCTGTCCCTCGTCACCTACGGAAAGGTCCTGGCGGTC GCCTCCGAGGCCTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: putative transmembrane sensor
Products: NA
Alternate protein names: Transmembrane Sensor; Fe2+-Dicitrate Sensor Membrane Component; FecR Family Protein; Sigma Factor Regulatory Protein FecR/PupR Family; Anti-Sigma Factor FecR Family; Fe2+-Dicitrate Sensor Membrane Protein; FecR Family; FecR-Like Transmembrane Sensor; Fec Operon Regulator FecR; Iron(III) Dicitrate Sensor Protein; PupR/FecR-Like Anti-Sigma Factor Protein; FecR Protein; Sigma Factor Regulatory Protein; Sensor Protein; Iron Acquisition-Like Protein; Anti-Sigma Factor Protein FecR Family; Heme Uptake Transmembrane Sensor; Regulator Of Iron Dicitrate Transport
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
NA
Sequences:
>Translated_324_residues MLSEPLNASRGARAPDSAMREAVQWEVRLRAGDVTREERDRFEAWRRADPAHDQAWTRLQQGLARFSPLQAASGAAVRSA LSEPSHARRRLLKAGGALSALALAAVGTRELVGRYALDADYHNAGLAPQVVALNDGAPMTLGASARVYATDAAAGHDVYL ASGQILTNPVTTSRIPLVVRTRDGSAATASARLSVDALRYHTVVAVQGGEATLATPDGGSLRVDGGSAWSITARRIARMP ETAEDIFAWKRGMLVVLDRPVPDIIETLGRYYSGYIRFPQEALSRRVSGVFALNDAEAALRQLASGLGLSLVTYGKVLAV ASEA >Mature_324_residues MLSEPLNASRGARAPDSAMREAVQWEVRLRAGDVTREERDRFEAWRRADPAHDQAWTRLQQGLARFSPLQAASGAAVRSA LSEPSHARRRLLKAGGALSALALAAVGTRELVGRYALDADYHNAGLAPQVVALNDGAPMTLGASARVYATDAAAGHDVYL ASGQILTNPVTTSRIPLVVRTRDGSAATASARLSVDALRYHTVVAVQGGEATLATPDGGSLRVDGGSAWSITARRIARMP ETAEDIFAWKRGMLVVLDRPVPDIIETLGRYYSGYIRFPQEALSRRVSGVFALNDAEAALRQLASGLGLSLVTYGKVLAV ASEA
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=297, Percent_Identity=24.5791245791246, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34481; Mature: 34481
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEPLNASRGARAPDSAMREAVQWEVRLRAGDVTREERDRFEAWRRADPAHDQAWTRLQ CCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHH QGLARFSPLQAASGAAVRSALSEPSHARRRLLKAGGALSALALAAVGTRELVGRYALDAD HHHHHCCCCHHCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCCC YHNAGLAPQVVALNDGAPMTLGASARVYATDAAAGHDVYLASGQILTNPVTTSRIPLVVR CCCCCCCCEEEEECCCCCEEECCCCEEEEECCCCCCEEEEECCEEEECCCCCCCCEEEEE TRDGSAATASARLSVDALRYHTVVAVQGGEATLATPDGGSLRVDGGSAWSITARRIARMP ECCCCCCCHHHEEEHEEEEEEEEEEEECCCEEEECCCCCEEEECCCCEEHHHHHHHHHCC ETAEDIFAWKRGMLVVLDRPVPDIIETLGRYYSGYIRFPQEALSRRVSGVFALNDAEAAL CHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCEEEECHHHHHH RQLASGLGLSLVTYGKVLAVASEA HHHHHCCCCHHHHHHHHHEEECCC >Mature Secondary Structure MLSEPLNASRGARAPDSAMREAVQWEVRLRAGDVTREERDRFEAWRRADPAHDQAWTRLQ CCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHH QGLARFSPLQAASGAAVRSALSEPSHARRRLLKAGGALSALALAAVGTRELVGRYALDAD HHHHHCCCCHHCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCCC YHNAGLAPQVVALNDGAPMTLGASARVYATDAAAGHDVYLASGQILTNPVTTSRIPLVVR CCCCCCCCEEEEECCCCCEEECCCCEEEEECCCCCCEEEEECCEEEECCCCCCCCEEEEE TRDGSAATASARLSVDALRYHTVVAVQGGEATLATPDGGSLRVDGGSAWSITARRIARMP ECCCCCCCHHHEEEHEEEEEEEEEEEECCCEEEECCCCCEEEECCCCEEHHHHHHHHHCC ETAEDIFAWKRGMLVVLDRPVPDIIETLGRYYSGYIRFPQEALSRRVSGVFALNDAEAAL CHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCEEEECHHHHHH RQLASGLGLSLVTYGKVLAVASEA HHHHHCCCCHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA