| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is hisC [H]
Identifier: 33864334
GI number: 33864334
Start: 2175698
End: 2176837
Strand: Reverse
Name: hisC [H]
Synonym: PMT2069
Alternate gene names: 33864334
Gene position: 2176837-2175698 (Counterclockwise)
Preceding gene: 33864335
Following gene: 33864327
Centisome position: 90.29
GC content: 55.61
Gene sequence:
>1140_bases ATGGGGTCTTCACCTGCACGAATGAGTTCTGGTGCCCCCGCTCCTCGGGTGGAAGTGGAGTGTCTGAAGGCCTATAGCGC TCCGCTTGAGGGACGCCGTGGATTGCTGCGTCTTGATTTTAATGAGAATACGATCGGCCCTAGCCCTCGTGTACTCGAGG CGTTGCGAGCGATTCCTGCTGATCAGATCGCCGTTTATCCGGAGTACGACGGGTTGCGAGAAGCGGTGGTGGCCAATTTG AGCAATCGTGATCAGGGCCGACCAGGGCTGACCCAGCCACTCAGCCCTAGTCAGATTGGCTTATTTAACGGCGTTGATGC AGCGATTCACGCCATCTTTCATGCCTATGGCGATCGTGGTGATCGCTTACTGACAACGAGCCCTACCTTTGGCTACTACA CGCCCTGCGCCCAGATGCAGGGGATGAAGATTCTGGCAATTCCCTATGAAGGCAGCGATTTTCGCTTCCCTCTGCAGGTG ATCCGCACGCTTTTGCAGCAGAAGCGGCCGAGGCTGCTGTTGCTCTGCAATCCCAACAACCCCACAGGCACGCGCTTGGC GCCTGAGCAGATCCTTGAGCTGGCTGTTGCAGCGCCTGAAACGTTGGTGGTAGTCGATGAGCTTTATGAGGCGTTCACGG GCGATAGCGTTTTGCCGCAAGCAGATTTCAGTGTTACCCCGAATCTGTTGGTGTTGCGTTCGCTGGCCAAAACCGCAGGT TTGGCTGGTCTGCGCATGGGGTTTGCGATCGGCTCTGCTGATGTGATCGATCGCGTCAGTCGTGTGACTGGGCCTTATGA CATCAATAGCTTTGCGGTAACAGCAGCTTTCGCGGCTCTTGATGATCAGGCTTACGTGGATGCCTACGTGGCTGATGTGT TGAAGGCGCGTGATTGGATTAGCGCTCGTCTTGATGCTTCTGGTGTGCCTTACCACCTTGATGGAGGGAATTACCTGTTG ATCTGGCCGCAGCAGCAACCAACAGAGGTGGAAGCAGCCTTACGCAAGCGAGGCATCTTGGTTCGGCTGATGACTGGCAA ACCGCTGATTGATGGATCCTTGCGGGTCAGCATCGGCACGATTGAGCAAATGCAGCAATTTTGGCAAGCCTTTGCCACTG TTGAGTCTCTTGCAGCCTGA
Upstream 100 bases:
>100_bases AACCTTCTCGTAGCTGTCGCCTTGCACTCTGCCGGCTCACGGCAGATACCCTAAAACTAGGGCTGTCGTTGTTGGGTATT CCCACGCTGGAGCGGATGTG
Downstream 100 bases:
>100_bases GTGATCGGCAAGACATGCTGATCGACTCACTCAGGCTATGGATGCGCTGTTAGCGCATCACCTCAATGACGGGTCCATCA CCCAGATCGCTCGGCAGGCT
Product: aminotransferase class-I
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPADQIAVYPEYDGLREAVVANL SNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRGDRLLTTSPTFGYYTPCAQMQGMKILAIPYEGSDFRFPLQV IRTLLQQKRPRLLLLCNPNNPTGTRLAPEQILELAVAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWISARLDASGVPYHLDGGNYLL IWPQQQPTEVEAALRKRGILVRLMTGKPLIDGSLRVSIGTIEQMQQFWQAFATVESLAA
Sequences:
>Translated_379_residues MGSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPADQIAVYPEYDGLREAVVANL SNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRGDRLLTTSPTFGYYTPCAQMQGMKILAIPYEGSDFRFPLQV IRTLLQQKRPRLLLLCNPNNPTGTRLAPEQILELAVAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWISARLDASGVPYHLDGGNYLL IWPQQQPTEVEAALRKRGILVRLMTGKPLIDGSLRVSIGTIEQMQQFWQAFATVESLAA >Mature_378_residues GSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPADQIAVYPEYDGLREAVVANLS NRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRGDRLLTTSPTFGYYTPCAQMQGMKILAIPYEGSDFRFPLQVI RTLLQQKRPRLLLLCNPNNPTGTRLAPEQILELAVAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAGL AGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWISARLDASGVPYHLDGGNYLLI WPQQQPTEVEAALRKRGILVRLMTGKPLIDGSLRVSIGTIEQMQQFWQAFATVESLAA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=289, Percent_Identity=29.0657439446367, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1786816, Length=209, Percent_Identity=27.7511961722488, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322075, Length=362, Percent_Identity=26.5193370165746, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 41126; Mature: 40994
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPA CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCC DQIAVYPEYDGLREAVVANLSNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRG CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC DRLLTTSPTFGYYTPCAQMQGMKILAIPYEGSDFRFPLQVIRTLLQQKRPRLLLLCNPNN CEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC PTGTRLAPEQILELAVAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG CCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWI HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SARLDASGVPYHLDGGNYLLIWPQQQPTEVEAALRKRGILVRLMTGKPLIDGSLRVSIGT HHHCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCCCEECCCEEEEEHH IEQMQQFWQAFATVESLAA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCC DQIAVYPEYDGLREAVVANLSNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRG CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC DRLLTTSPTFGYYTPCAQMQGMKILAIPYEGSDFRFPLQVIRTLLQQKRPRLLLLCNPNN CEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC PTGTRLAPEQILELAVAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG CCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWI HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SARLDASGVPYHLDGGNYLLIWPQQQPTEVEAALRKRGILVRLMTGKPLIDGSLRVSIGT HHHCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCCCEECCCEEEEEHH IEQMQQFWQAFATVESLAA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA