Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is chlM [H]

Identifier: 33864305

GI number: 33864305

Start: 2153421

End: 2154134

Strand: Direct

Name: chlM [H]

Synonym: PMT2040

Alternate gene names: 33864305

Gene position: 2153421-2154134 (Clockwise)

Preceding gene: 33864304

Following gene: 33864310

Centisome position: 89.32

GC content: 53.64

Gene sequence:

>714_bases
ATGGCCATGGAACAGCGCCAAGAGCTCAAACAGGCCGAAAAAACTGAAGTAGCCAACTACTTCAACGGAACAGGATTTGA
TCGCTGGAATCGCATCTACAGCGAAAGTGATGATGTCAATAAAGTGCAGCGCAATATCCGCATCGGCCATCAAAAAACGG
TGGATGATGTGCTCGCCTGGCTTCAGGAACGCGGTGATCTGAGTGCCATGAGTTTCTGCGACGCCGGCTGCGGGGTAGGA
AGCCTCAGCCTTCCTCTGGCCGCAATGGGGGCTGGATCGATTGCCGCAAGTGACATTTCCGCCGCCATGGTGGCCGAAAC
CAAACGCCGCGCTGCAGATGCGCAGCTGGATCTAAGCCGACTAACTTTCACCACCTCCGACCTCGAAAGCCTGCAGGGTT
GCTTTCACACCGTGATCTGCCTGGATGTCTTCATCCACTACCCCCAACAGGCAGCGGAAGAGATGGTCCGTCACCTATGC
GGACTCACACAAGAAAGTTTGCTAGTGAGCTTTGCCCCTTACACCCCTCTACTAGCGCTACTCAAACGCATTGGCCAGCT
GTTCCCAGGGCCTAGTAAAACAACTCGCGCGTATACCCTTCGCGAAGACGGCATCATCAAAGCCGCAATGGGCTGCGGAT
TCGAACCCATCCGCAGCAAACTCAATCAGGCTCCATTCTACTTTTCACGACTGATTGAGTTCAAGAAAATTTAA

Upstream 100 bases:

>100_bases
AGCCCTTAACAGACTTACTCCGCTGGCAGTGGAAACCGGATACTGAAGAGCTGATCTGGAAGCATGCTGCTTAAGATCCC
GATCGTCTGAACCCAACTCA

Downstream 100 bases:

>100_bases
AATTACAGCTAAATCTTCTAGCAAAAGCAACAGGGAAAGGCAATATCTACTAAACTCAATCAAGCTTGAATTGACCAAAC
AAGTTAATATCAACTGCCAC

Product: Mg-protoporphyrin IX methyl transferase

Products: NA

Alternate protein names: Magnesium-protoporphyrin IX methyltransferase [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MAMEQRQELKQAEKTEVANYFNGTGFDRWNRIYSESDDVNKVQRNIRIGHQKTVDDVLAWLQERGDLSAMSFCDAGCGVG
SLSLPLAAMGAGSIAASDISAAMVAETKRRAADAQLDLSRLTFTTSDLESLQGCFHTVICLDVFIHYPQQAAEEMVRHLC
GLTQESLLVSFAPYTPLLALLKRIGQLFPGPSKTTRAYTLREDGIIKAAMGCGFEPIRSKLNQAPFYFSRLIEFKKI

Sequences:

>Translated_237_residues
MAMEQRQELKQAEKTEVANYFNGTGFDRWNRIYSESDDVNKVQRNIRIGHQKTVDDVLAWLQERGDLSAMSFCDAGCGVG
SLSLPLAAMGAGSIAASDISAAMVAETKRRAADAQLDLSRLTFTTSDLESLQGCFHTVICLDVFIHYPQQAAEEMVRHLC
GLTQESLLVSFAPYTPLLALLKRIGQLFPGPSKTTRAYTLREDGIIKAAMGCGFEPIRSKLNQAPFYFSRLIEFKKI
>Mature_236_residues
AMEQRQELKQAEKTEVANYFNGTGFDRWNRIYSESDDVNKVQRNIRIGHQKTVDDVLAWLQERGDLSAMSFCDAGCGVGS
LSLPLAAMGAGSIAASDISAAMVAETKRRAADAQLDLSRLTFTTSDLESLQGCFHTVICLDVFIHYPQQAAEEMVRHLCG
LTQESLLVSFAPYTPLLALLKRIGQLFPGPSKTTRAYTLREDGIIKAAMGCGFEPIRSKLNQAPFYFSRLIEFKKI

Specific function: Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor [H]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010251
- InterPro:   IPR010940 [H]

Pfam domain/function: PF07109 Mg-por_mtran_C [H]

EC number: =2.1.1.11 [H]

Molecular weight: Translated: 26280; Mature: 26149

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMEQRQELKQAEKTEVANYFNGTGFDRWNRIYSESDDVNKVQRNIRIGHQKTVDDVLAW
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
LQERGDLSAMSFCDAGCGVGSLSLPLAAMGAGSIAASDISAAMVAETKRRAADAQLDLSR
HHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTFTTSDLESLQGCFHTVICLDVFIHYPQQAAEEMVRHLCGLTQESLLVSFAPYTPLLAL
HHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
LKRIGQLFPGPSKTTRAYTLREDGIIKAAMGCGFEPIRSKLNQAPFYFSRLIEFKKI
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AMEQRQELKQAEKTEVANYFNGTGFDRWNRIYSESDDVNKVQRNIRIGHQKTVDDVLAW
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
LQERGDLSAMSFCDAGCGVGSLSLPLAAMGAGSIAASDISAAMVAETKRRAADAQLDLSR
HHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTFTTSDLESLQGCFHTVICLDVFIHYPQQAAEEMVRHLCGLTQESLLVSFAPYTPLLAL
HHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
LKRIGQLFPGPSKTTRAYTLREDGIIKAAMGCGFEPIRSKLNQAPFYFSRLIEFKKI
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704138; 8590279; 8905231 [H]