Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33864264

Identifier: 33864264

GI number: 33864264

Start: 2113802

End: 2114479

Strand: Reverse

Name: 33864264

Synonym: PMT1999

Alternate gene names: NA

Gene position: 2114479-2113802 (Counterclockwise)

Preceding gene: 33864265

Following gene: 33864258

Centisome position: 87.71

GC content: 54.57

Gene sequence:

>678_bases
ATGAGCTGTCAGCCCGGTTCATCCTTGGAAGAAGATAAGGCTTTTTTGCTTTTGGCACTCCACAGTTCTTCAGAAACGCT
TGGTGTCGCTGTTCAAGATTGCCGCGATCCCAAGACCAGTCGGCGAACTGCAACTTTCCCACTGGGCCGCGGGCTCTCAA
ATAGTTTGCTCAATTGTGTAGAGGAGCTTTTGCCAGCAGCCTCTTGGCCTCAGTTGGCTCGCTTGGCCGTGGCCATTGGT
CCTGGCGGATTTACCGGGACTCGTTTAACCGTCGTGATGGCAAGAACTCTGGCCCAGCAGCTTGGTTGTTCCCTCGATGG
GGTAAGCAGTTTTGCTTTGATGGCTCCTCGCTTGGCGGTTGCGTTAAGCCATGAGCAAATGGAGCAGCCATTTTGGATCG
TGAAATCCCTGCCGCGGCGAGGAACTGTGGCCGGTCGTTATCAGTTGCAAATGGCTGCAGACGTTGGCGCTGCAAAGGCT
GTTGTGGAGTTGGAATCGCCCCATTTGTTAGCAGAGGATTTCAAGGCCTTCCCTGCCCTTGATGCCCAAGATGATGTGGC
TAAGGATGTGGAGCATTTGCTTGAACTGTGCGCTGTGGCGCACAGTTTGGGCCAGGAGGTCGCCTGGACTGATGTGCTGC
CTGTTTATCCCACATCTCCGGTGGTGGTCTCGTCTTGA

Upstream 100 bases:

>100_bases
AAGGAGTGACAGGGGTGGAATGGGATGTACGGAACTGCGGTAGTTTTCTTTTAGATCATGGGCGCTGGAAGCGATTGTGC
CCTGGTCAGGAGCTGCCTCG

Downstream 100 bases:

>100_bases
GGAGTTGGTGCCGTCCTGGGCCGATTGTTGTTGTAGGCCTCTTGTTCTGGCTGATTGCTGCCGGACCTTTGCGTCCTTAT
CGGCAAGCGCTGACGAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Molecular Chaperone; Glycoprotease Family; Inactive Metal-Dependent Protease

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIG
PGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAVALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKA
VVELESPHLLAEDFKAFPALDAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS

Sequences:

>Translated_225_residues
MSCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIG
PGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAVALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKA
VVELESPHLLAEDFKAFPALDAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS
>Mature_224_residues
SCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIGP
GGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAVALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKAV
VELESPHLLAEDFKAFPALDAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23962; Mature: 23831

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCV
CCCCCCCCCCCCCEEEEEEEECCCCCHHEEHHHHCCCCCCCCEECCCCCCCHHHHHHHHH
EELLPAASWPQLARLAVAIGPGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAV
HHHHCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKAVVELESPHLLAEDFKAFPAL
HHCHHHHHCCHHHHHCCCCCCCCCCEEEEEEHHHCCHHHEEEEECCCCHHHHHHHHCCCC
DAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCV
CCCCCCCCCCCCEEEEEEEECCCCCHHEEHHHHCCCCCCCCEECCCCCCCHHHHHHHHH
EELLPAASWPQLARLAVAIGPGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAV
HHHHCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKAVVELESPHLLAEDFKAFPAL
HHCHHHHHCCHHHHHCCCCCCCCCCEEEEEEHHHCCHHHEEEEECCCCHHHHHHHHCCCC
DAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA