| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864264
Identifier: 33864264
GI number: 33864264
Start: 2113802
End: 2114479
Strand: Reverse
Name: 33864264
Synonym: PMT1999
Alternate gene names: NA
Gene position: 2114479-2113802 (Counterclockwise)
Preceding gene: 33864265
Following gene: 33864258
Centisome position: 87.71
GC content: 54.57
Gene sequence:
>678_bases ATGAGCTGTCAGCCCGGTTCATCCTTGGAAGAAGATAAGGCTTTTTTGCTTTTGGCACTCCACAGTTCTTCAGAAACGCT TGGTGTCGCTGTTCAAGATTGCCGCGATCCCAAGACCAGTCGGCGAACTGCAACTTTCCCACTGGGCCGCGGGCTCTCAA ATAGTTTGCTCAATTGTGTAGAGGAGCTTTTGCCAGCAGCCTCTTGGCCTCAGTTGGCTCGCTTGGCCGTGGCCATTGGT CCTGGCGGATTTACCGGGACTCGTTTAACCGTCGTGATGGCAAGAACTCTGGCCCAGCAGCTTGGTTGTTCCCTCGATGG GGTAAGCAGTTTTGCTTTGATGGCTCCTCGCTTGGCGGTTGCGTTAAGCCATGAGCAAATGGAGCAGCCATTTTGGATCG TGAAATCCCTGCCGCGGCGAGGAACTGTGGCCGGTCGTTATCAGTTGCAAATGGCTGCAGACGTTGGCGCTGCAAAGGCT GTTGTGGAGTTGGAATCGCCCCATTTGTTAGCAGAGGATTTCAAGGCCTTCCCTGCCCTTGATGCCCAAGATGATGTGGC TAAGGATGTGGAGCATTTGCTTGAACTGTGCGCTGTGGCGCACAGTTTGGGCCAGGAGGTCGCCTGGACTGATGTGCTGC CTGTTTATCCCACATCTCCGGTGGTGGTCTCGTCTTGA
Upstream 100 bases:
>100_bases AAGGAGTGACAGGGGTGGAATGGGATGTACGGAACTGCGGTAGTTTTCTTTTAGATCATGGGCGCTGGAAGCGATTGTGC CCTGGTCAGGAGCTGCCTCG
Downstream 100 bases:
>100_bases GGAGTTGGTGCCGTCCTGGGCCGATTGTTGTTGTAGGCCTCTTGTTCTGGCTGATTGCTGCCGGACCTTTGCGTCCTTAT CGGCAAGCGCTGACGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Molecular Chaperone; Glycoprotease Family; Inactive Metal-Dependent Protease
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIG PGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAVALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKA VVELESPHLLAEDFKAFPALDAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS
Sequences:
>Translated_225_residues MSCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIG PGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAVALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKA VVELESPHLLAEDFKAFPALDAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS >Mature_224_residues SCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCVEELLPAASWPQLARLAVAIGP GGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAVALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKAV VELESPHLLAEDFKAFPALDAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23962; Mature: 23831
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCV CCCCCCCCCCCCCEEEEEEEECCCCCHHEEHHHHCCCCCCCCEECCCCCCCHHHHHHHHH EELLPAASWPQLARLAVAIGPGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAV HHHHCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKAVVELESPHLLAEDFKAFPAL HHCHHHHHCCHHHHHCCCCCCCCCCEEEEEEHHHCCHHHEEEEECCCCHHHHHHHHCCCC DAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure SCQPGSSLEEDKAFLLLALHSSSETLGVAVQDCRDPKTSRRTATFPLGRGLSNSLLNCV CCCCCCCCCCCCEEEEEEEECCCCCHHEEHHHHCCCCCCCCEECCCCCCCHHHHHHHHH EELLPAASWPQLARLAVAIGPGGFTGTRLTVVMARTLAQQLGCSLDGVSSFALMAPRLAV HHHHCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ALSHEQMEQPFWIVKSLPRRGTVAGRYQLQMAADVGAAKAVVELESPHLLAEDFKAFPAL HHCHHHHHCCHHHHHCCCCCCCCCCEEEEEEHHHCCHHHEEEEECCCCHHHHHHHHCCCC DAQDDVAKDVEHLLELCAVAHSLGQEVAWTDVLPVYPTSPVVVSS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA