Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is ycf34

Identifier: 33864265

GI number: 33864265

Start: 2114476

End: 2114775

Strand: Reverse

Name: ycf34

Synonym: PMT2000

Alternate gene names: NA

Gene position: 2114775-2114476 (Counterclockwise)

Preceding gene: 33864268

Following gene: 33864264

Centisome position: 87.72

GC content: 57.0

Gene sequence:

>300_bases
ATGGTGGGATCACCCTCCAGAATGGGTGCAGCAGAGCGAAGGGAGGGCATGTGTATTTGTGTCGACTGCCGCTGGGTTGA
TCGTTGCCAGGCCTATCACGCGGTGGAGCGGCAGCACGGGGTTGCCCATCTCAATGCGGCACCGGATCTGGAGCCTCAGA
ACCCACGCATCCATATCAGTGTGATTGATTTGCCTGAAGGAGTGACAGGGGTGGAATGGGATGTACGGAACTGCGGTAGT
TTTCTTTTAGATCATGGGCGCTGGAAGCGATTGTGCCCTGGTCAGGAGCTGCCTCGATGA

Upstream 100 bases:

>100_bases
ACGAACGGCACCTCCTACTAAGACCGTTCCAGCAGGAAGGTCTTGAATCGATAGTGGCCAGTGATCAGGATGTAATTGTT
CCCAAAGGGCCTGGACCCGG

Downstream 100 bases:

>100_bases
GCTGTCAGCCCGGTTCATCCTTGGAAGAAGATAAGGCTTTTTTGCTTTTGGCACTCCACAGTTCTTCAGAAACGCTTGGT
GTCGCTGTTCAAGATTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MVGSPSRMGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLPEGVTGVEWDVRNCGS
FLLDHGRWKRLCPGQELPR

Sequences:

>Translated_99_residues
MVGSPSRMGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLPEGVTGVEWDVRNCGS
FLLDHGRWKRLCPGQELPR
>Mature_99_residues
MVGSPSRMGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHISVIDLPEGVTGVEWDVRNCGS
FLLDHGRWKRLCPGQELPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11158; Mature: 11158

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSPSRMGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHIS
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEE
VIDLPEGVTGVEWDVRNCGSFLLDHGRWKRLCPGQELPR
EEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVGSPSRMGAAERREGMCICVDCRWVDRCQAYHAVERQHGVAHLNAAPDLEPQNPRIHIS
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEE
VIDLPEGVTGVEWDVRNCGSFLLDHGRWKRLCPGQELPR
EEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA