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The map label for this gene is crtQ [H]

Identifier: 33864233

GI number: 33864233

Start: 2078722

End: 2080194

Strand: Reverse

Name: crtQ [H]

Synonym: PMT1968

Alternate gene names: 33864233

Gene position: 2080194-2078722 (Counterclockwise)

Preceding gene: 33864238

Following gene: 33864232

Centisome position: 86.28

GC content: 53.22

Gene sequence:

>1473_bases
GTGCGGGTCGCCATTGTGGGCGCTGGGCTTGCCGGATTGGCTGCAGCGGTTGATCTCGTTGATGCCGGTCATACCGTGGA
TCTCTACGAAGCTCGGCCGTTCATTGGTGGCAAGGTTGGTAGTTGGGAAGATCCAGATGGCAACCATGTCGAAATGGGGT
TGCATGTTTTCTTTTTCAATTACGCCAATCTTTTTGCGCTGATGCGCAAGGTGGGTGCCATTGACAATCTGCTGCCAAAG
GACCACACCCATTTGTTCGTCAATCGTGGTGGTGATCTTCGATCTCTTGATTTTCGTTTTGCGCTAGGGGCTCCTTTTAA
CGGTCTCAAGGCATTTTTTACCACTCCTCAGCTGAACTGGATCGATAAATTGCGCAATGCCCTTGCTCTGGGAACGAGTC
CCATTGTTAGGGGCCTGGTGGATTACGAGGGGGCCATGAGCACAATCCGTGCTCTCGATGCAGTGAGTTTTCAACAGTGG
TTTCTCAGTCATGGCGGCAGCCTGCAGAGCATTCAGCGCATGTGGAACCCGGTTGCCTATGCCCTTGGCTTTATTGACTG
TGAGGCGATCTCTGCCCGTTGCATGCTCACCATTTTCATGATGTTTGCAGCTCGTACGGAAGCATCCAAGCTGAATTTGC
TTAAAGGCTCCCCTCATCGTTGGCTTACCGCGCCGATTCTTGATTACATCCAGGCAAGGGGTGGTCGTCTTCATCTCCGC
CATCGTGTTCGTGAGGTGCACTTTCGCGATGACGACGTTCCCGTGGTTACCGGGCTCAGCCTTGGCACACCAGAAGGGGA
TGTCATGGTTGAAGCTGATTGCTATTTGGCCGCTTGCGATGTGCCAGGCATTCAGCGCTTGCTTCCTGAAGCATGGCGTA
AGTTCCCCCAATTTGATGACATCTACAAGCTCCAAGCCGTGCCAGTCGCCACCGTGCAGCTGCGTTACGACGGCTGGGTG
ACTGAGTTGGGTAATGACCCCATACACGAGGCTGCACGCAGGGATCTTCGGAGTCCTGTTGGCTTGGATAATCTTTTGTA
TACAGCTGATGCAGATTTCAGCTGCTTTGCGGATCTGGCTTTGGCGAGTCCTGAGGACTATCGCCGGGAGGGTCTGGGCT
CTTTACTCCAATGTGTACTCACTCCTGGTGACCCCTGGATTTCTAAATCCGTAGAGACGATCGTTTCGCACACCGATGCT
CAAGTGCGTGAATTGTTCCCTTCGTCTCTTTCTCTCAAGCTGGTGTGGAGCAACGTCGTCAAACTTGCTCAGTCTCTTTA
TCGAGAAGCCCCAGGGATGGAGCCTTATAGACCAGATCAGTGCACGCCTGTCAGTAATTTCTTTTTGGCGGGGAGTTATA
CCCGCCAGGATTACATCGACTCAATGGAGGGTGCCACGATGAGTGGCCATTTGGCTGCGGCGGCGATCCTTCATCAACCA
GCGATGTTGGCCACCAATGAGGCGGTGGCTTAA

Upstream 100 bases:

>100_bases
CTCAATTCATTTTATGGAGGGATGTCTCTCGTTGCACTATCCAATGCAGTCAACCTATCCGCCATATTTATAGAGTCGGA
AGGATTTTTGTAGGAAGCGC

Downstream 100 bases:

>100_bases
CGATGGGACGCTGGCTTGAACATACAGTTTCTAGCGATATCAATGCTCCCGTTGAGCAGGTATGGGCTGTATGGATGGAT
CTCGAGGCCATGCCTCGCTG

Product: zeta-carotene desaturase

Products: NA

Alternate protein names: Carotene 7,8-desaturase [H]

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MRVAIVGAGLAGLAAAVDLVDAGHTVDLYEARPFIGGKVGSWEDPDGNHVEMGLHVFFFNYANLFALMRKVGAIDNLLPK
DHTHLFVNRGGDLRSLDFRFALGAPFNGLKAFFTTPQLNWIDKLRNALALGTSPIVRGLVDYEGAMSTIRALDAVSFQQW
FLSHGGSLQSIQRMWNPVAYALGFIDCEAISARCMLTIFMMFAARTEASKLNLLKGSPHRWLTAPILDYIQARGGRLHLR
HRVREVHFRDDDVPVVTGLSLGTPEGDVMVEADCYLAACDVPGIQRLLPEAWRKFPQFDDIYKLQAVPVATVQLRYDGWV
TELGNDPIHEAARRDLRSPVGLDNLLYTADADFSCFADLALASPEDYRREGLGSLLQCVLTPGDPWISKSVETIVSHTDA
QVRELFPSSLSLKLVWSNVVKLAQSLYREAPGMEPYRPDQCTPVSNFFLAGSYTRQDYIDSMEGATMSGHLAAAAILHQP
AMLATNEAVA

Sequences:

>Translated_490_residues
MRVAIVGAGLAGLAAAVDLVDAGHTVDLYEARPFIGGKVGSWEDPDGNHVEMGLHVFFFNYANLFALMRKVGAIDNLLPK
DHTHLFVNRGGDLRSLDFRFALGAPFNGLKAFFTTPQLNWIDKLRNALALGTSPIVRGLVDYEGAMSTIRALDAVSFQQW
FLSHGGSLQSIQRMWNPVAYALGFIDCEAISARCMLTIFMMFAARTEASKLNLLKGSPHRWLTAPILDYIQARGGRLHLR
HRVREVHFRDDDVPVVTGLSLGTPEGDVMVEADCYLAACDVPGIQRLLPEAWRKFPQFDDIYKLQAVPVATVQLRYDGWV
TELGNDPIHEAARRDLRSPVGLDNLLYTADADFSCFADLALASPEDYRREGLGSLLQCVLTPGDPWISKSVETIVSHTDA
QVRELFPSSLSLKLVWSNVVKLAQSLYREAPGMEPYRPDQCTPVSNFFLAGSYTRQDYIDSMEGATMSGHLAAAAILHQP
AMLATNEAVA
>Mature_490_residues
MRVAIVGAGLAGLAAAVDLVDAGHTVDLYEARPFIGGKVGSWEDPDGNHVEMGLHVFFFNYANLFALMRKVGAIDNLLPK
DHTHLFVNRGGDLRSLDFRFALGAPFNGLKAFFTTPQLNWIDKLRNALALGTSPIVRGLVDYEGAMSTIRALDAVSFQQW
FLSHGGSLQSIQRMWNPVAYALGFIDCEAISARCMLTIFMMFAARTEASKLNLLKGSPHRWLTAPILDYIQARGGRLHLR
HRVREVHFRDDDVPVVTGLSLGTPEGDVMVEADCYLAACDVPGIQRLLPEAWRKFPQFDDIYKLQAVPVATVQLRYDGWV
TELGNDPIHEAARRDLRSPVGLDNLLYTADADFSCFADLALASPEDYRREGLGSLLQCVLTPGDPWISKSVETIVSHTDA
QVRELFPSSLSLKLVWSNVVKLAQSLYREAPGMEPYRPDQCTPVSNFFLAGSYTRQDYIDSMEGATMSGHLAAAAILHQP
AMLATNEAVA

Specific function: Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zeta carotene desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014103
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: =1.14.99.30 [H]

Molecular weight: Translated: 54041; Mature: 54041

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAIVGAGLAGLAAAVDLVDAGHTVDLYEARPFIGGKVGSWEDPDGNHVEMGLHVFFFN
CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHEEEHHH
YANLFALMRKVGAIDNLLPKDHTHLFVNRGGDLRSLDFRFALGAPFNGLKAFFTTPQLNW
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCEECCCCCHH
IDKLRNALALGTSPIVRGLVDYEGAMSTIRALDAVSFQQWFLSHGGSLQSIQRMWNPVAY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALGFIDCEAISARCMLTIFMMFAARTEASKLNLLKGSPHRWLTAPILDYIQARGGRLHLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCEEHHHHHHHHHCCCCEEHHH
HRVREVHFRDDDVPVVTGLSLGTPEGDVMVEADCYLAACDVPGIQRLLPEAWRKFPQFDD
HHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCC
IYKLQAVPVATVQLRYDGWVTELGNDPIHEAARRDLRSPVGLDNLLYTADADFSCFADLA
CEEEEECEEEEEEEEECCCHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHH
LASPEDYRREGLGSLLQCVLTPGDPWISKSVETIVSHTDAQVRELFPSSLSLKLVWSNVV
HCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHHHHHH
KLAQSLYREAPGMEPYRPDQCTPVSNFFLAGSYTRQDYIDSMEGATMSGHLAAAAILHQP
HHHHHHHHHCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHCC
AMLATNEAVA
HHCCCCCCCC
>Mature Secondary Structure
MRVAIVGAGLAGLAAAVDLVDAGHTVDLYEARPFIGGKVGSWEDPDGNHVEMGLHVFFFN
CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHEEEHHH
YANLFALMRKVGAIDNLLPKDHTHLFVNRGGDLRSLDFRFALGAPFNGLKAFFTTPQLNW
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCEECCCCCHH
IDKLRNALALGTSPIVRGLVDYEGAMSTIRALDAVSFQQWFLSHGGSLQSIQRMWNPVAY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALGFIDCEAISARCMLTIFMMFAARTEASKLNLLKGSPHRWLTAPILDYIQARGGRLHLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCEEHHHHHHHHHCCCCEEHHH
HRVREVHFRDDDVPVVTGLSLGTPEGDVMVEADCYLAACDVPGIQRLLPEAWRKFPQFDD
HHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCC
IYKLQAVPVATVQLRYDGWVTELGNDPIHEAARRDLRSPVGLDNLLYTADADFSCFADLA
CEEEEECEEEEEEEEECCCHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHH
LASPEDYRREGLGSLLQCVLTPGDPWISKSVETIVSHTDAQVRELFPSSLSLKLVWSNVV
HCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHHHHHH
KLAQSLYREAPGMEPYRPDQCTPVSNFFLAGSYTRQDYIDSMEGATMSGHLAAAAILHQP
HHHHHHHHHCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHCC
AMLATNEAVA
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]