| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864232
Identifier: 33864232
GI number: 33864232
Start: 2078270
End: 2078719
Strand: Reverse
Name: 33864232
Synonym: PMT1967
Alternate gene names: NA
Gene position: 2078719-2078270 (Counterclockwise)
Preceding gene: 33864233
Following gene: 33864226
Centisome position: 86.22
GC content: 51.56
Gene sequence:
>450_bases ATGGGACGCTGGCTTGAACATACAGTTTCTAGCGATATCAATGCTCCCGTTGAGCAGGTATGGGCTGTATGGATGGATCT CGAGGCCATGCCTCGCTGGATGAACTGGATTGAATCTGTCAAGACTCTTGATGATCCGAGTCTCACTGATTGGACCTTGG CTGCTCAGGGCTTTCGTTTCCATTGGCAGGCAAGGATCAGCAAGCAGGTTGAAGGCCAGCAGTTGCAATGGGAATCCATA GGAGGGCTACCTACGAAAGGTGCTGTGCGTTTCTATCCGGAGAGCGAGAACCGTACAGCTGTGAAATTGAGCGTTACTTA CGAGTTACCGAGGCCCTTGGCACCCTTGATGGAACCGAGCATCCTGGGAGGGATTGTTACTCGTGAGCTCCAGGCCAATC TTGACAGATTTAGGGATCTTGTGGAAAGCGGTTACTGCGTTTCTTCCTGA
Upstream 100 bases:
>100_bases TCGACTCAATGGAGGGTGCCACGATGAGTGGCCATTTGGCTGCGGCGGCGATCCTTCATCAACCAGCGATGTTGGCCACC AATGAGGCGGTGGCTTAACG
Downstream 100 bases:
>100_bases GTGCTCGAGGACAGCCGCCTGGCGGCTGATGAGTGGATTGATCCTGCTCACGGTTGCGCTAACGGGATGCAGTACCGATC GCTCCACTACCGAGAAGTTG
Product: integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Cyclase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MGRWLEHTVSSDINAPVEQVWAVWMDLEAMPRWMNWIESVKTLDDPSLTDWTLAAQGFRFHWQARISKQVEGQQLQWESI GGLPTKGAVRFYPESENRTAVKLSVTYELPRPLAPLMEPSILGGIVTRELQANLDRFRDLVESGYCVSS
Sequences:
>Translated_149_residues MGRWLEHTVSSDINAPVEQVWAVWMDLEAMPRWMNWIESVKTLDDPSLTDWTLAAQGFRFHWQARISKQVEGQQLQWESI GGLPTKGAVRFYPESENRTAVKLSVTYELPRPLAPLMEPSILGGIVTRELQANLDRFRDLVESGYCVSS >Mature_148_residues GRWLEHTVSSDINAPVEQVWAVWMDLEAMPRWMNWIESVKTLDDPSLTDWTLAAQGFRFHWQARISKQVEGQQLQWESIG GLPTKGAVRFYPESENRTAVKLSVTYELPRPLAPLMEPSILGGIVTRELQANLDRFRDLVESGYCVSS
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17049; Mature: 16917
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRWLEHTVSSDINAPVEQVWAVWMDLEAMPRWMNWIESVKTLDDPSLTDWTLAAQGFRF CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEE HWQARISKQVEGQQLQWESIGGLPTKGAVRFYPESENRTAVKLSVTYELPRPLAPLMEPS EHHHHHHHCCCCCEECHHHCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHCCHH ILGGIVTRELQANLDRFRDLVESGYCVSS HHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GRWLEHTVSSDINAPVEQVWAVWMDLEAMPRWMNWIESVKTLDDPSLTDWTLAAQGFRF CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEE HWQARISKQVEGQQLQWESIGGLPTKGAVRFYPESENRTAVKLSVTYELPRPLAPLMEPS EHHHHHHHCCCCCEECHHHCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHCCHH ILGGIVTRELQANLDRFRDLVESGYCVSS HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA