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The map label for this gene is yfcH [C]

Identifier: 33864238

GI number: 33864238

Start: 2082604

End: 2083545

Strand: Reverse

Name: yfcH [C]

Synonym: PMT1973

Alternate gene names: 33864238

Gene position: 2083545-2082604 (Counterclockwise)

Preceding gene: 33864239

Following gene: 33864233

Centisome position: 86.42

GC content: 55.73

Gene sequence:

>942_bases
ATGCGCCTTCTACTTGTTGGTTGCACAGGTTTTGTCGGCCGTGAGCTGGTCCCCCAGTTGTTGGCAGCCAAGCATCAGTT
GATCTTGGTCAGTCGCAAGGCTGCCTCTGGGTTCGATCAAGAGCGCCAGGCAGGGCAGTTGGAGTGGCTGCAGATCAATC
CGGCGGATCCAAACAGTTGGCTTGATGGCCCACTACTGACTGCCTTGGCCCAAGTAGAAGGAGTGGTGAACCTGGCCGGA
GAACCTATCGCTGAGCAGCGCTGGACAGCTGCTCATTGTCAGAAGCTGGAGTCGAGTCGTTTGGACACAACCAGGGCATT
GGTGAAAGCCATGAGTCAACTCAAGACACCACCAAGAGTGCTCTTGAATGCCTCTGCAGTGGGCTATTACGGCACCAGTC
CAGATGGCTACTTCACGGAAAAGAGTCCTTGTGGACAAGATTTCCTCGCTCACCTTTGTGAGCGCTGGGAGGCTGCAGCT
GCTGCTAAACCGTCTGCTACCAGATTGGTAGTAGTGCGTATTGGCATCGTTCTAGGGCCCGACGGAGGGGCTCTAGGCAA
GATGCTGCCAGTGTTCAGGCTTGGTATTGGTGGTCCGGTGGGCAGTGGCCTTCAGTGGATGAGTTGGATTCATCGCACTG
ATCTGTGTCAGTTGATTGAAAAGGCTCTTAAGGAACGGGCTTGGTCCGGTGTGGTGAATGGGGTTGCTCCTGAGCCTGTC
CCTATGGCTTCGTTCGCGGAGGTTCTCGGCAAGACTCTTGGTCGTCCAAGCCTCTTGCCGGTTCCAGGTCCGCTCCTCAA
AATCTTGCTTGGGGATGGCGCTCGTGTCGTCCTTGAGGGTCAACAGGTGGTCTCAGAACGACTTGCAGGGTTGGGTTTCA
GGTTTAAGTATCCCGATCTATGCCAGGCCTTATCCGCAGCCACCATGCCCACACCCCATTGA

Upstream 100 bases:

>100_bases
TTTGCTTTAGTGCCTATTGCAAATCGCCTTGGGCTAGCTAGTCCACTGAAGGCTCCGCTCTCAGCCCCTTAGTCTCGCGG
CCAATGCCGTCAGTTCTTTT

Downstream 100 bases:

>100_bases
TGAGGGCAGCGGTCATTAACAGGCTGATGGCGGGCAAAAATAGGGGCATCCAGAGTTGCTGAAACAGTCCTATTGGTTTC
TCCACTCCCTGGCTTGCGGC

Product: cell division inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRLLLVGCTGFVGRELVPQLLAAKHQLILVSRKAASGFDQERQAGQLEWLQINPADPNSWLDGPLLTALAQVEGVVNLAG
EPIAEQRWTAAHCQKLESSRLDTTRALVKAMSQLKTPPRVLLNASAVGYYGTSPDGYFTEKSPCGQDFLAHLCERWEAAA
AAKPSATRLVVVRIGIVLGPDGGALGKMLPVFRLGIGGPVGSGLQWMSWIHRTDLCQLIEKALKERAWSGVVNGVAPEPV
PMASFAEVLGKTLGRPSLLPVPGPLLKILLGDGARVVLEGQQVVSERLAGLGFRFKYPDLCQALSAATMPTPH

Sequences:

>Translated_313_residues
MRLLLVGCTGFVGRELVPQLLAAKHQLILVSRKAASGFDQERQAGQLEWLQINPADPNSWLDGPLLTALAQVEGVVNLAG
EPIAEQRWTAAHCQKLESSRLDTTRALVKAMSQLKTPPRVLLNASAVGYYGTSPDGYFTEKSPCGQDFLAHLCERWEAAA
AAKPSATRLVVVRIGIVLGPDGGALGKMLPVFRLGIGGPVGSGLQWMSWIHRTDLCQLIEKALKERAWSGVVNGVAPEPV
PMASFAEVLGKTLGRPSLLPVPGPLLKILLGDGARVVLEGQQVVSERLAGLGFRFKYPDLCQALSAATMPTPH
>Mature_313_residues
MRLLLVGCTGFVGRELVPQLLAAKHQLILVSRKAASGFDQERQAGQLEWLQINPADPNSWLDGPLLTALAQVEGVVNLAG
EPIAEQRWTAAHCQKLESSRLDTTRALVKAMSQLKTPPRVLLNASAVGYYGTSPDGYFTEKSPCGQDFLAHLCERWEAAA
AAKPSATRLVVVRIGIVLGPDGGALGKMLPVFRLGIGGPVGSGLQWMSWIHRTDLCQLIEKALKERAWSGVVNGVAPEPV
PMASFAEVLGKTLGRPSLLPVPGPLLKILLGDGARVVLEGQQVVSERLAGLGFRFKYPDLCQALSAATMPTPH

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=308, Percent_Identity=38.6363636363636, Blast_Score=199, Evalue=3e-51,
Organism=Escherichia coli, GI1788642, Length=315, Percent_Identity=40.3174603174603, Blast_Score=218, Evalue=4e-58,
Organism=Drosophila melanogaster, GI28573846, Length=314, Percent_Identity=31.2101910828025, Blast_Score=145, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33517; Mature: 33517

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLVGCTGFVGRELVPQLLAAKHQLILVSRKAASGFDQERQAGQLEWLQINPADPNSW
CEEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHCCCCHHHHCCCEEEEEECCCCCCCC
LDGPLLTALAQVEGVVNLAGEPIAEQRWTAAHCQKLESSRLDTTRALVKAMSQLKTPPRV
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH
LLNASAVGYYGTSPDGYFTEKSPCGQDFLAHLCERWEAAAAAKPSATRLVVVRIGIVLGP
EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECC
DGGALGKMLPVFRLGIGGPVGSGLQWMSWIHRTDLCQLIEKALKERAWSGVVNGVAPEPV
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PMASFAEVLGKTLGRPSLLPVPGPLLKILLGDGARVVLEGQQVVSERLAGLGFRFKYPDL
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCHHH
CQALSAATMPTPH
HHHHHHCCCCCCC
>Mature Secondary Structure
MRLLLVGCTGFVGRELVPQLLAAKHQLILVSRKAASGFDQERQAGQLEWLQINPADPNSW
CEEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHCCCCHHHHCCCEEEEEECCCCCCCC
LDGPLLTALAQVEGVVNLAGEPIAEQRWTAAHCQKLESSRLDTTRALVKAMSQLKTPPRV
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH
LLNASAVGYYGTSPDGYFTEKSPCGQDFLAHLCERWEAAAAAKPSATRLVVVRIGIVLGP
EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECC
DGGALGKMLPVFRLGIGGPVGSGLQWMSWIHRTDLCQLIEKALKERAWSGVVNGVAPEPV
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PMASFAEVLGKTLGRPSLLPVPGPLLKILLGDGARVVLEGQQVVSERLAGLGFRFKYPDL
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCHHH
CQALSAATMPTPH
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]