| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is sspA [C]
Identifier: 33864226
GI number: 33864226
Start: 2072098
End: 2072823
Strand: Reverse
Name: sspA [C]
Synonym: PMT1961
Alternate gene names: 33864226
Gene position: 2072823-2072098 (Counterclockwise)
Preceding gene: 33864232
Following gene: 33864225
Centisome position: 85.98
GC content: 53.86
Gene sequence:
>726_bases ATGATGGAACTGCATCAATTCCGCCATTCCGCCTTCTGTCTCAAGGTGCGGATGGTCTTGCAGGCCAAGGGTTTGACTTA CCAGGTGGTGGAAGTTACCCCCGGGTTAGGACAGCTCAACGTGTTTCGCTTGTCAGGTCAGCGTCAGGTCCCGGTACTTG TCGATGGCGATGTTGTTTTGGCAGATTCCAGCACTATTGCTCGACATCTAGAGGCTAAGCAGCCGGAACCACCCCTCATT CCGGTTGATCCACAGCAGGCCGCGCAGGTGTACTTGATTGAAGATTGGGCTGATACGACATTGGCGCGGGCAGGCCGGTC AGCTTTGTTGCAGGCTGCTGCCTTGGATTCTGAGTTGCGTTTAGCTCTTCTTCCAGAAGATTTGCCAACTCCCTTGCGTC AGGTCATGGGAGATCTCCCTGGGGGGTTGTTGAACGGTGCCTCTGAGATCATTGGCAAGGCAGAGAGGGTTGAGTTATTA ACGAGCCTCGAACAATTGGCTGATTTGATGCAGAAAAGGTCCTGGCTAGTAGGAGATGCGATGAGCTTGGCTGATTTAGC TGTAGCCGCTCAGATTTCTTTAATGCGTTTCCCAGCCTCGGCTGGGGCAGCACTTGCCGGTAAAGGTGTGTTCGGCCTGA GTGATCACCCGCGGCTGCAGCCCTTATTCCACTGGAGGGATCAGCTTGAGTTGTCATTGCTTGAGAAGGATGACTCAGCC CGATGA
Upstream 100 bases:
>100_bases TTTACTCTCAGCCGAAAGTGAAATGCGATTATTGCCCTCTTTGCCTTAGCGGGCTTTTGACGCTGTTAGCTACTCTGCCG TTCTTTTGGCAGAGCAAACG
Downstream 100 bases:
>100_bases GCCTTGCTTGAACATCGATCCAGAAATGGCTGTCTAATGTCTGATCCCTTGATTCGTGATTCTGATCACTACGTCGTTTT GGAGCCTGGCCAGTCTGAGC
Product: glutathione S-transferase
Products: HX; R-S-glutathione
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Zeta Class; Glutathione S-Transferase-Like
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVLADSSTIARHLEAKQPEPPLI PVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELRLALLPEDLPTPLRQVMGDLPGGLLNGASEIIGKAERVELL TSLEQLADLMQKRSWLVGDAMSLADLAVAAQISLMRFPASAGAALAGKGVFGLSDHPRLQPLFHWRDQLELSLLEKDDSA R
Sequences:
>Translated_241_residues MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVLADSSTIARHLEAKQPEPPLI PVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELRLALLPEDLPTPLRQVMGDLPGGLLNGASEIIGKAERVELL TSLEQLADLMQKRSWLVGDAMSLADLAVAAQISLMRFPASAGAALAGKGVFGLSDHPRLQPLFHWRDQLELSLLEKDDSA R >Mature_241_residues MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVLADSSTIARHLEAKQPEPPLI PVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELRLALLPEDLPTPLRQVMGDLPGGLLNGASEIIGKAERVELL TSLEQLADLMQKRSWLVGDAMSLADLAVAAQISLMRFPASAGAALAGKGVFGLSDHPRLQPLFHWRDQLELSLLEKDDSA R
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.18
Molecular weight: Translated: 26224; Mature: 26224
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVL CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCEEE ADSSTIARHLEAKQPEPPLIPVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELR ECCHHHHHHHHCCCCCCCCCCCCHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCE LALLPEDLPTPLRQVMGDLPGGLLNGASEIIGKAERVELLTSLEQLADLMQKRSWLVGDA EEECCCCCCHHHHHHHHHCCCHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHCCH MSLADLAVAAQISLMRFPASAGAALAGKGVFGLSDHPRLQPLFHWRDQLELSLLEKDDSA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHEEEECCCCCC R C >Mature Secondary Structure MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVL CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCEEE ADSSTIARHLEAKQPEPPLIPVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELR ECCHHHHHHHHCCCCCCCCCCCCHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCE LALLPEDLPTPLRQVMGDLPGGLLNGASEIIGKAERVELLTSLEQLADLMQKRSWLVGDA EEECCCCCCHHHHHHHHHCCCHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHCCH MSLADLAVAAQISLMRFPASAGAALAGKGVFGLSDHPRLQPLFHWRDQLELSLLEKDDSA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHEEEECCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA