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The map label for this gene is yrbE [H]

Identifier: 33864132

GI number: 33864132

Start: 1971736

End: 1972773

Strand: Reverse

Name: yrbE [H]

Synonym: PMT1865

Alternate gene names: 33864132

Gene position: 1972773-1971736 (Counterclockwise)

Preceding gene: 33864133

Following gene: 33864131

Centisome position: 81.83

GC content: 55.49

Gene sequence:

>1038_bases
TTGATAATTTCCCCGATGCGCCATGGCCTGCCGATGACCGATCCCATGGTTCCGGTGAAGGTCGGTGTGATCGGGATTGG
CAATATGGGTTGGCATCATGCCCGTGTGCTCAGTCTGCTTAAGGATGCGCAGTTGGTGGCAGTCGCTGATCCCGATCCTG
AGCGTGGTCAGCTGGCAACTGAACAGTTTGGATGCGATTGGTTCCCTGACTACCACAGCTTGCTAGGCGAGGTCGAAGCC
GTCTGCATTGCTGTGCCGACATTGCTTCATCACAAGGTCGGGCAGGCCTGCTTGGAGGCAGGCCTGCATGTGTTAATCGA
AAAACCGATTGCGGCCAGTCAGGAGGAGGCATCCGCATTGATTGTGGCGGCGAATAAGGCTGGACGGCTCTTGCAGGTTG
GCCATATTGAACGCTTTAACCCTGCCTTTCGAGAGTTGATCAAGGTGGTGGAAAATGAGGAGGTTGTGGTTCTTGAGGCT
CGTCGCCATAGCCCCCATGGTGACCGAGCGAATGATGTGTCGGTGGTGCTTGATCTGATGATTCATGACCTCGACTTGGT
TCTTGAGCTGGCGGGTGCTCCGGTGGTAGGTCTGGCTGCTGCAGGGGGCCGCACTGCCGAGGGCCCGATCGATTACGTCA
ATGCCACGCTTGGCTTCAGCAATGGTGTGGTGGCTAGCCTCACTGCTAGCAAGATGAGCCACCGCAAAATTCGCAGTCTC
AGTGCCCATTGTCGGGGCAGTCTTGTTGAGACTGATTTCCTGAATCACACCCTGCATATACATCGTCGTGCTCATGAGTG
GTATTCAGCCGATCACGGTGAGTTGTTGTATCGCAATGACGGTTTTATCGAAGAGGTCAGCACGACTTCTATTGAGCCTC
TCTATGCCGAGTTGGAGCATTTTCTTCAGTGTTTGCGAGGTCGTGAGACACCAGCCGTTGATGGGGAGCAGGCTTCGCGC
GCGCTTCGTTTGGCTGACCTGATTGAACATGCCGTCGAACACCCCGGCATGGGGCTTTCCTTGGAGGAGCCCATCTGA

Upstream 100 bases:

>100_bases
CTGCGATGGTTTGCAATTCGAGATCGTCACGATGAAGGGTCCTCGTATCGAGCGTGTGCGACTGATTCTTCCCAGTCACG
ATCACACTGAGGAATGATCG

Downstream 100 bases:

>100_bases
GTCGTTAGCAACACATCCGTCCAACAACCCTCTCGGCTCGCACAGCGCTACTTTCTCAGGGGCTTCTTTGCAAATCGGCT
GTTGCTCCATTCGCTTGCTT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MIISPMRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGCDWFPDYHSLLGEVEA
VCIAVPTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEA
RRHSPHGDRANDVSVVLDLMIHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSL
SAHCRGSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCLRGRETPAVDGEQASR
ALRLADLIEHAVEHPGMGLSLEEPI

Sequences:

>Translated_345_residues
MIISPMRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGCDWFPDYHSLLGEVEA
VCIAVPTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEA
RRHSPHGDRANDVSVVLDLMIHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSL
SAHCRGSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCLRGRETPAVDGEQASR
ALRLADLIEHAVEHPGMGLSLEEPI
>Mature_345_residues
MIISPMRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGCDWFPDYHSLLGEVEA
VCIAVPTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEA
RRHSPHGDRANDVSVVLDLMIHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSL
SAHCRGSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCLRGRETPAVDGEQASR
ALRLADLIEHAVEHPGMGLSLEEPI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=228, Percent_Identity=27.6315789473684, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787574, Length=195, Percent_Identity=29.2307692307692, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37596; Mature: 37596

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISPMRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLAT
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
EQFGCDWFPDYHSLLGEVEAVCIAVPTLLHHKVGQACLEAGLHVLIEKPIAASQEEASAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCEE
IVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEARRHSPHGDRANDVSVVLDLM
EEEECCCCCEEEECCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
IHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSL
HHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHEEEECCCCCEEEHHHHHHHHHHHHHHH
SAHCRGSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEH
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHH
FLQCLRGRETPAVDGEQASRALRLADLIEHAVEHPGMGLSLEEPI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIISPMRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLAT
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
EQFGCDWFPDYHSLLGEVEAVCIAVPTLLHHKVGQACLEAGLHVLIEKPIAASQEEASAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCEE
IVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEARRHSPHGDRANDVSVVLDLM
EEEECCCCCEEEECCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
IHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSL
HHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHEEEECCCCCEEEHHHHHHHHHHHHHHH
SAHCRGSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEH
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHH
FLQCLRGRETPAVDGEQASRALRLADLIEHAVEHPGMGLSLEEPI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]