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The map label for this gene is 33864076

Identifier: 33864076

GI number: 33864076

Start: 1909682

End: 1911331

Strand: Reverse

Name: 33864076

Synonym: PMT1809

Alternate gene names: NA

Gene position: 1911331-1909682 (Counterclockwise)

Preceding gene: 33864077

Following gene: 33864075

Centisome position: 79.28

GC content: 44.0

Gene sequence:

>1650_bases
ATGCAGCAGCTGCAGGCTGCGGTTGCATTGCATAAGCAGGGTGAGCTGGATAAGGCAGAAGCGATTTATCAGCAAGTGCT
TGCTGTTGATGTTAATAACTTTTATGCGCTTAACTTCTGTGGTTCTATTAAGCGTGAGAAGAAGAGATTTGATGAAGGGA
TTGACTTCTTAAGTAGGGCAATTTCGCTGCAGCCGGATAATCCTGATGCCATCTACAACCTTGGAAATGTATTTAAAGAT
TCTGAGAGGTGGGATGAGGCAATCTCTTGTTATGAGAAGACACTTGGTTTGAGGGCTGAGTCTCCAGAAGCGCTGAATAA
CTTGGGTATCTGCCTGAAGGAAGTTGAGCGCTTTGAGTATTCAGAGATTGTCTTGAGGCGTGTTGTCTCGATGCAGCCTG
GGCTTGCAGGAGCATGGTTGAATCTCGGCAATACTTTTAAGGAGCAAGAAAAGTATTCAGAAGCGAAAGCAAGTTATCGG
AATGCGATCGATTTGAAGCCCGATTTTGAAGCTGCGTATTTTGCTTTGGGCTTGGTATTGAAGGAAGAGGGAAAGGTTGA
GGAAGCGATTGCGAGTTATCGAAAAGCGATCGAGTTGAAGCCAGATTTTGCGGATGTGTATTTTGCTTTGGGCTTAGTAT
TGAAGGAAGCGGGAGAGTTTGAGGCTGCACGGCAAATCGTTTCTGCTCTTTCTACAGTAAATGCAATGGAAGATTCAACC
TTGCTGTCTTTTTCTCTCTGTGATTTAGTTTTTGACTGGTATCACAGGAGGGTATTAAACCTTTTGGAGGATGTGGAGAT
GACTGCCCTTTCTGGTGCTTCTGCGCCGTTTTCTGCATACGAAACTGTGAGAAAAATTCAGCCTCAACTTTTTCCTCCTT
TGTTTTTGAAAGGAGAAGGTGATAGGGCAAATGAAAAGCACTTGTATCGAAATGGGTATCTGGTAGAAGATGAGATATTG
CCAGAAGATTTATGTGCTGAGTTTGTAAATGGGTTTGAGGGTGCCAATGCGATGAGTGCAGCGTTGATCCGTGCGGTATC
TGAGAAGGGCGTCTTAGGTTCTGTCTTGGGGAAAATATTTAAACACACTGATTTTCCACACTTGGTATGGAATTGTATTT
ACTTTGCCAAGGGACCTGATGATCAGGCTATCTCTGATGCATGGCATTACGACAATCATTATAATGTTTGGACCCCAAAA
TTAATGATTTACCTTAATTCTCAGCGAGAAGAGGGTGGGGCTACGGAATTTGTTGATACGTCTCTATCTAGAAGATTGTC
AGAGGAAACAGATTATATGGGTTTTATTTGGCAGCGTGAGTCATATGCTGATCGAGTAAAAGGATCGGTAAAAGACCTAG
GTCTTGATCCTGCCACGTTGGATCCCGACCATTACACTTTCTCTCCAGATCATGCAGGATCAGGTGTGTGGTTTTGCCCT
TCCAGGGTTCTGCATCGAGGGGTAAGTCCAAAGAAAGGTGTAAGGCATGTGCTCTCTTTTTCGTTGACTCCTCTGCCACA
TGATTGCGGCTGGTCTATTGATCAGTGTGTCGATAAGTCAATTGAGATTCTGCAGGACAAAATAAATAAGGGTATGCAGA
AGTCTGATGTCAATCCCTATTGGATTCCCGCTGAGGCTGGCTACGCATAA

Upstream 100 bases:

>100_bases
TTGGATTGATTGGGATAGGGGTGTCAGGTAGTGAGGCGTGGCAAGAAGTGGCCGTAAAATGGCATGAAGTTGGAAATGCC
TGGTGAATCAAGAGGAGATC

Downstream 100 bases:

>100_bases
GCCAGAAACCAAACCGCAAACCAGGAAAGTCTGCGAATTTTTCCTCCTCTGAAGGTTGTTTGTTGGTGGGAGCTACAGAT
AGCTACTGGAGAAGGGCATC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MQQLQAAVALHKQGELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKRFDEGIDFLSRAISLQPDNPDAIYNLGNVFKD
SERWDEAISCYEKTLGLRAESPEALNNLGICLKEVERFEYSEIVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYR
NAIDLKPDFEAAYFALGLVLKEEGKVEEAIASYRKAIELKPDFADVYFALGLVLKEAGEFEAARQIVSALSTVNAMEDST
LLSFSLCDLVFDWYHRRVLNLLEDVEMTALSGASAPFSAYETVRKIQPQLFPPLFLKGEGDRANEKHLYRNGYLVEDEIL
PEDLCAEFVNGFEGANAMSAALIRAVSEKGVLGSVLGKIFKHTDFPHLVWNCIYFAKGPDDQAISDAWHYDNHYNVWTPK
LMIYLNSQREEGGATEFVDTSLSRRLSEETDYMGFIWQRESYADRVKGSVKDLGLDPATLDPDHYTFSPDHAGSGVWFCP
SRVLHRGVSPKKGVRHVLSFSLTPLPHDCGWSIDQCVDKSIEILQDKINKGMQKSDVNPYWIPAEAGYA

Sequences:

>Translated_549_residues
MQQLQAAVALHKQGELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKRFDEGIDFLSRAISLQPDNPDAIYNLGNVFKD
SERWDEAISCYEKTLGLRAESPEALNNLGICLKEVERFEYSEIVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYR
NAIDLKPDFEAAYFALGLVLKEEGKVEEAIASYRKAIELKPDFADVYFALGLVLKEAGEFEAARQIVSALSTVNAMEDST
LLSFSLCDLVFDWYHRRVLNLLEDVEMTALSGASAPFSAYETVRKIQPQLFPPLFLKGEGDRANEKHLYRNGYLVEDEIL
PEDLCAEFVNGFEGANAMSAALIRAVSEKGVLGSVLGKIFKHTDFPHLVWNCIYFAKGPDDQAISDAWHYDNHYNVWTPK
LMIYLNSQREEGGATEFVDTSLSRRLSEETDYMGFIWQRESYADRVKGSVKDLGLDPATLDPDHYTFSPDHAGSGVWFCP
SRVLHRGVSPKKGVRHVLSFSLTPLPHDCGWSIDQCVDKSIEILQDKINKGMQKSDVNPYWIPAEAGYA
>Mature_549_residues
MQQLQAAVALHKQGELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKRFDEGIDFLSRAISLQPDNPDAIYNLGNVFKD
SERWDEAISCYEKTLGLRAESPEALNNLGICLKEVERFEYSEIVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYR
NAIDLKPDFEAAYFALGLVLKEEGKVEEAIASYRKAIELKPDFADVYFALGLVLKEAGEFEAARQIVSALSTVNAMEDST
LLSFSLCDLVFDWYHRRVLNLLEDVEMTALSGASAPFSAYETVRKIQPQLFPPLFLKGEGDRANEKHLYRNGYLVEDEIL
PEDLCAEFVNGFEGANAMSAALIRAVSEKGVLGSVLGKIFKHTDFPHLVWNCIYFAKGPDDQAISDAWHYDNHYNVWTPK
LMIYLNSQREEGGATEFVDTSLSRRLSEETDYMGFIWQRESYADRVKGSVKDLGLDPATLDPDHYTFSPDHAGSGVWFCP
SRVLHRGVSPKKGVRHVLSFSLTPLPHDCGWSIDQCVDKSIEILQDKINKGMQKSDVNPYWIPAEAGYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=253, Percent_Identity=31.6205533596838, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI32307150, Length=253, Percent_Identity=31.6205533596838, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI118766330, Length=167, Percent_Identity=29.3413173652695, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI118766328, Length=167, Percent_Identity=29.3413173652695, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI301336134, Length=216, Percent_Identity=31.0185185185185, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI83415184, Length=216, Percent_Identity=31.0185185185185, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI224809432, Length=242, Percent_Identity=24.3801652892562, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI22749211, Length=104, Percent_Identity=37.5, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI170784867, Length=197, Percent_Identity=25.8883248730964, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=254, Percent_Identity=30.7086614173228, Blast_Score=111, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI115532690, Length=254, Percent_Identity=30.7086614173228, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI25147174, Length=175, Percent_Identity=28, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25146105, Length=207, Percent_Identity=24.1545893719807, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI17647755, Length=239, Percent_Identity=31.7991631799163, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24585827, Length=239, Percent_Identity=31.7991631799163, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24585829, Length=239, Percent_Identity=31.7991631799163, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24656717, Length=233, Percent_Identity=25.3218884120172, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI18110006, Length=233, Percent_Identity=25.3218884120172, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI19920486, Length=222, Percent_Identity=26.1261261261261, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI161076610, Length=220, Percent_Identity=26.3636363636364, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24647123, Length=168, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 61792; Mature: 61792

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLQAAVALHKQGELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKRFDEGIDFLSRA
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
ISLQPDNPDAIYNLGNVFKDSERWDEAISCYEKTLGLRAESPEALNNLGICLKEVERFEY
HCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SEIVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYRNAIDLKPDFEAAYFALGLVL
HHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KEEGKVEEAIASYRKAIELKPDFADVYFALGLVLKEAGEFEAARQIVSALSTVNAMEDST
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH
LLSFSLCDLVFDWYHRRVLNLLEDVEMTALSGASAPFSAYETVRKIQPQLFPPLFLKGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCEEEECCC
DRANEKHLYRNGYLVEDEILPEDLCAEFVNGFEGANAMSAALIRAVSEKGVLGSVLGKIF
CCCCCCHHHHCCEEECHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
KHTDFPHLVWNCIYFAKGPDDQAISDAWHYDNHYNVWTPKLMIYLNSQREEGGATEFVDT
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCHHHHHH
SLSRRLSEETDYMGFIWQRESYADRVKGSVKDLGLDPATLDPDHYTFSPDHAGSGVWFCP
HHHHHHHHCCCCHHEEECCHHHHHHHCCCHHHCCCCCCCCCCCCCEECCCCCCCCEEECC
SRVLHRGVSPKKGVRHVLSFSLTPLPHDCGWSIDQCVDKSIEILQDKINKGMQKSDVNPY
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE
WIPAEAGYA
EECCCCCCC
>Mature Secondary Structure
MQQLQAAVALHKQGELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKRFDEGIDFLSRA
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
ISLQPDNPDAIYNLGNVFKDSERWDEAISCYEKTLGLRAESPEALNNLGICLKEVERFEY
HCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SEIVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYRNAIDLKPDFEAAYFALGLVL
HHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KEEGKVEEAIASYRKAIELKPDFADVYFALGLVLKEAGEFEAARQIVSALSTVNAMEDST
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH
LLSFSLCDLVFDWYHRRVLNLLEDVEMTALSGASAPFSAYETVRKIQPQLFPPLFLKGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCEEEECCC
DRANEKHLYRNGYLVEDEILPEDLCAEFVNGFEGANAMSAALIRAVSEKGVLGSVLGKIF
CCCCCCHHHHCCEEECHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
KHTDFPHLVWNCIYFAKGPDDQAISDAWHYDNHYNVWTPKLMIYLNSQREEGGATEFVDT
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCHHHHHH
SLSRRLSEETDYMGFIWQRESYADRVKGSVKDLGLDPATLDPDHYTFSPDHAGSGVWFCP
HHHHHHHHCCCCHHEEECCHHHHHHHCCCHHHCCCCCCCCCCCCCEECCCCCCCCEEECC
SRVLHRGVSPKKGVRHVLSFSLTPLPHDCGWSIDQCVDKSIEILQDKINKGMQKSDVNPY
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE
WIPAEAGYA
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]