| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863995
Identifier: 33863995
GI number: 33863995
Start: 1831070
End: 1831792
Strand: Reverse
Name: 33863995
Synonym: PMT1728
Alternate gene names: NA
Gene position: 1831792-1831070 (Counterclockwise)
Preceding gene: 33863996
Following gene: 33863994
Centisome position: 75.98
GC content: 60.44
Gene sequence:
>723_bases ATGGGCGAGTACTGGTGGAGTGCCCGGCACGCTTGTCTGCAGTTAGTGGGTCTTGACTTTGGTCCAGACCCTTTGCCCGA TGCTGCTCCTGAAGCTTTTCGTTTGCTCCGGCCCTGGATCCATCAGGGTTGGGAGATGGTGCTTTTGGCGGCAGAGCTGC TGCGCTCTGATGGACCCTTGCTGAGGCATGGAGCTAAGGCCTTTTCGGTCGATTATCACTTGCGATGTCAGCAGGCTTTA GATGCTTGGGGATGGCAGCCAGGTCAGTTGCAGGAGGCCTTGGAGCAGGTGCGGCGGAGTGCGCTGGAGGCCGATCGGTT GAATTGGCTGGCCCGCCACCGCCCTTTTCCTGGTGTGATTGAGCGTCTTCGTGGCCTCCACGATGAAGGCTTCGACTTGG TGGTGCTCACCACCAAGGGGGCCGAGTTCACCGCTGAACTGTTGAAGTGCTTTCAACTTGCTCCTCATGGGTTGTACGGC CATGAGTCGGGCAGTAAGACTGAGGTGCTGCTGCGGTTGGCGGCGGAGCGACCACTGCGGGGCTTCGTTGAGGATCGTCG TGTCACCCTCGAGACGGTGCTCGCGACGCCCGGACTCTCTTCTCTGCCTTGCTATCTGGCGAGTTGGGGCTACCTCAAGC CGGAAGACTCTCGGGCCTTGCCCATGGGTATTCGCCTGTTGGAGCCAGAAGCTTTGGCGGCACCCTTGGCGAGCTGGCCC TGA
Upstream 100 bases:
>100_bases CCATTCCTAGGTTCGAATCCTAGCGGCCCAGTTTCTCAATCCTCAGTTGACGTCTCGCTCCCTGTTGGTTTTCGACTTTG ACGGTGTCATTGTTGATGGG
Downstream 100 bases:
>100_bases TCCGTTAGGGTACGTCTGTACTATCTGGGACGGTTCGCGGTTGTGGTGGTATTGGACTCTTTGATCGGTGTCCGTCAGCT TTGCCGCAGTGTTTTTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGEYWWSARHACLQLVGLDFGPDPLPDAAPEAFRLLRPWIHQGWEMVLLAAELLRSDGPLLRHGAKAFSVDYHLRCQQAL DAWGWQPGQLQEALEQVRRSALEADRLNWLARHRPFPGVIERLRGLHDEGFDLVVLTTKGAEFTAELLKCFQLAPHGLYG HESGSKTEVLLRLAAERPLRGFVEDRRVTLETVLATPGLSSLPCYLASWGYLKPEDSRALPMGIRLLEPEALAAPLASWP
Sequences:
>Translated_240_residues MGEYWWSARHACLQLVGLDFGPDPLPDAAPEAFRLLRPWIHQGWEMVLLAAELLRSDGPLLRHGAKAFSVDYHLRCQQAL DAWGWQPGQLQEALEQVRRSALEADRLNWLARHRPFPGVIERLRGLHDEGFDLVVLTTKGAEFTAELLKCFQLAPHGLYG HESGSKTEVLLRLAAERPLRGFVEDRRVTLETVLATPGLSSLPCYLASWGYLKPEDSRALPMGIRLLEPEALAAPLASWP >Mature_239_residues GEYWWSARHACLQLVGLDFGPDPLPDAAPEAFRLLRPWIHQGWEMVLLAAELLRSDGPLLRHGAKAFSVDYHLRCQQALD AWGWQPGQLQEALEQVRRSALEADRLNWLARHRPFPGVIERLRGLHDEGFDLVVLTTKGAEFTAELLKCFQLAPHGLYGH ESGSKTEVLLRLAAERPLRGFVEDRRVTLETVLATPGLSSLPCYLASWGYLKPEDSRALPMGIRLLEPEALAAPLASWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26941; Mature: 26810
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEYWWSARHACLQLVGLDFGPDPLPDAAPEAFRLLRPWIHQGWEMVLLAAELLRSDGPL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH LRHGAKAFSVDYHLRCQQALDAWGWQPGQLQEALEQVRRSALEADRLNWLARHRPFPGVI HHHCCHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ERLRGLHDEGFDLVVLTTKGAEFTAELLKCFQLAPHGLYGHESGSKTEVLLRLAAERPLR HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHH GFVEDRRVTLETVLATPGLSSLPCYLASWGYLKPEDSRALPMGIRLLEPEALAAPLASWP HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCC >Mature Secondary Structure GEYWWSARHACLQLVGLDFGPDPLPDAAPEAFRLLRPWIHQGWEMVLLAAELLRSDGPL CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH LRHGAKAFSVDYHLRCQQALDAWGWQPGQLQEALEQVRRSALEADRLNWLARHRPFPGVI HHHCCHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ERLRGLHDEGFDLVVLTTKGAEFTAELLKCFQLAPHGLYGHESGSKTEVLLRLAAERPLR HHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHH GFVEDRRVTLETVLATPGLSSLPCYLASWGYLKPEDSRALPMGIRLLEPEALAAPLASWP HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA