Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is tyrC [H]

Identifier: 33863991

GI number: 33863991

Start: 1826934

End: 1827878

Strand: Reverse

Name: tyrC [H]

Synonym: PMT1724

Alternate gene names: 33863991

Gene position: 1827878-1826934 (Counterclockwise)

Preceding gene: 33863994

Following gene: 33863989

Centisome position: 75.82

GC content: 55.87

Gene sequence:

>945_bases
ATGGACTGCAGTGCGAGAACCGTAGGGATGGAGCAGAACAAAAACACATCACTTTGCGCTGGAGTCGTAGGGCTTGGGCT
GATTGGTGGCTCCTTGGGATTGGATCTGCAGGCGCTTGGTTGGAAGGTCAATGGTCTGGTGCATCGTTCCACTACTGCTG
ATAGGGCTCGCGCTAGGGGTTTGGCTCACTTGGTGAGTACCGATCCGGGCATTCTCGCGGATTGTGATTTGGTGATCCTG
GCGCTGCCTTTGGCTCAGCTGCTCAATCCAGATCCGAATCTTCTAAAGGCTTTGCCTGCAGCTGCTGTGGTAACTGATGT
GGGTTCAGTGAAGATGCCTGTTTTAGAGCTCTGGCGCGACCTACACCCCCGCTTTGTGGCTAGCCATCCCATGGCAGGCA
CCGCTGAAGCAGGAGTGGACGCAGGGCTGCGGGGCTTATTTCAGCAACGTCCTTGGGTAGCGACACCTGACAATCAAACA
GACCTTGAGGCGCTCGAGTTGGTGCGTCGATTTGCGGTGTCTTTGGGCAGTCAATGGTTTACGGCGGATGCAGCTAACCA
TGATCAAGCGGTGGCGCTGATTTCCCACCTGCCTGTGCTGGTGAGTGCTGCGTTGCTACGAACAGTGGGTGAGGAGCGTG
ATCCTGCTGTTCGCGAACTCGCCAGAGTGCTGTCTTCTAGTGGTTTTGCTGATACCACCAGGGTGGGTGGTGGCAATCCC
CAGTTGGGGACATCTATGGCTGAGAGCAACACCGCAGCGATCTTGCGTGGTTTGGCTGCTTATCGCTGGAGCTTGGAGCA
GCTTGAGGAGGCCGTTTTGAATGGGCACTGGTCGCAGTTAAAGGCTGAATTGGAACGTTCCCAGGCATTGCGACCCAGCT
TTCTTGTTGCTGCTAACAACGACCTCAATTCGCCACCCGCAACTGATGACCTCGCTGAGCCATGA

Upstream 100 bases:

>100_bases
GAGCAGGTGCTTGAGTTGCTGATGGCTGCGGGCTTCGAGCATTGCCAGAGCCTAGGAAGCTGTAAACCCGAGAAAGCTCC
ATGTTGATTGGTCGATCAAC

Downstream 100 bases:

>100_bases
GCTGGCGACAGGTCATGAGTGCCGAGATGCTCACCCCTGCAGTACCTTCACCAGGGTGAATTGAGTCGCCACAGAGCCAG
AGCCCTCGCATGGGAGTGCG

Product: arogenate dehydrogenase

Products: NA

Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARGLAHLVSTDPGILADCDLVIL
ALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQT
DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP
QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPATDDLAEP

Sequences:

>Translated_314_residues
MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARGLAHLVSTDPGILADCDLVIL
ALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQT
DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP
QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPATDDLAEP
>Mature_314_residues
MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARGLAHLVSTDPGILADCDLVIL
ALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQT
DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP
QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPATDDLAEP

Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF02153 PDH [H]

EC number: =1.3.1.43; =1.3.1.12 [H]

Molecular weight: Translated: 33242; Mature: 33242

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCEEECCEEECCCHHHHHHHHH
LAHLVSTDPGILADCDLVILALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRD
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQTDLEALELVRRFAVSLGSQWF
HCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
TADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC
DLNSPPATDDLAEP
CCCCCCCCCCCCCC
>Mature Secondary Structure
MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCEEECCEEECCCHHHHHHHHH
LAHLVSTDPGILADCDLVILALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRD
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQTDLEALELVRRFAVSLGSQWF
HCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE
TADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC
DLNSPPATDDLAEP
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7916685 [H]