| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is pgm [H]
Identifier: 33863881
GI number: 33863881
Start: 1712999
End: 1714699
Strand: Direct
Name: pgm [H]
Synonym: PMT1614
Alternate gene names: 33863881
Gene position: 1712999-1714699 (Clockwise)
Preceding gene: 33863879
Following gene: 33863885
Centisome position: 71.05
GC content: 54.85
Gene sequence:
>1701_bases TTGCGTTTGATTAGGTTCGATGAAGAACTGCCTTCGTCTCTGATGACCAGCTCGGCCCAGACGGGACCCACACAGCGCCA GGTACATCTGAACACACCCTTCAACGACCAAAAGCCAGGGACCTCCGGCCTACGCAAAAGCAGCAAGCAATTCGAACAAA CCAATTACCTGGAGAGCTTCATTGAAGCAATCTTCCAAACCCTACCTGGCGTTGAGGGAGGGACTCTGATCTTGGGGGGG GATGGTCGCTACGGCAATCACCGCGCCATTGATGTGATCCTGCGTATGGGTGCTGCTCATGGCCTAAGCCGAGTGATCAC CACCACAAATGGCATTCTCTCCACGCCGGCAGCATCCCATCTCATCCGTGCCAATAAGGCCATCGGAGGAATCATCCTTT CCGCGAGCCACAACCAAGGCGGTCCAGATGGCGACTTCGGCGTCAAAGTCAACGGTGCCAATGGTGGCCCAGCAGCCGAA TCACTCACAAACGCGATCTACGCATGTAGCCAAGCTTTAGAGAAATACAGCCTTGTCGATGCAGACGTAATCCCACTTGA AACCCCCGGCCACCATGCCATCGGTGGCATGACCGTAGACGTGATCGACGGCGTTGAAGACTATGTAGAGCTGATGCAGA AGTTGTTCGACTTCGGGCGCATCAAGGACCTCATCAAAACCGACTTCCCAGTCGTGTTTGATGCCATGCATGCTGTCACT GGTCCCTATGCAAAACGGCTACTGGAAGGACTTCTCGGTGCCCCAACTGGCACTGTGCGCAACGGAGTCCCGCTTGAGGA TTTTGGTGGAGGCCACCCAGATCCCAACCTCACCTACGCCGCTGAACTAGCAGACCTCCTCCTCAATGGCAAGGCCTACA GCTTCGGTGCCGCCTGCGATGGTGATGGCGACCGCAACATGATCCTGGGCAGAGGTTGCTTCGTTAACCCAAGTGACAGC CTTGCAATCCTGGCTGCTAATGCCAACGTTGCACCGGCCTATGCCGATGGGCTTGCTGGTGTGGCCCGCTCCATGCCCAC TAGCGCCGCAGTGGATGTTGTAGCCAAACAACTCAATATCGACTGTTTTGAAACTCCCACCGGGTGGAAGTTTTTCGGCA ACCTGCTTGATGCAGGTCGAATCACCCTCTGTGGTGAAGAAAGCTTCGGCACTGGCAGCAACCACGTGCGTGAGAAGGAT GGACTATGGGCAGTGCTCTTCTGGCTACAGATCCTGGCAGAGCGACGCTGCAGCGTCGCTGATGTGATGACACAGCATTG GAGTCGTTTTGGACGCCATTACTACTCCCGTCACGACTACGAGGCGATTGCTAGTGAAAATGCTCATGGTCTTTACAACC GGTTGGAGAGCATGCTTCCTCGACTAATCGGTCAACCATTCGCCGGGCGCCAAGTGAGCCAGGCAGACAATTTTAGTTAT AGCGATCCTGTGGATGGCTCAGAGACACAATCTCAGGGTCTACGCATCCTGCTGGAAGACGGCAGCAGAGTCGTGGTTCG ACTCTCGGGCACCGGCACCAAAGGTGCCACATTGCGCGTTTATCTAGAATGCTACGAACCTAGTCATGGCAACTTAAATC AAGATCCCCAGCATGCTCTAGCCGATCTCATCAATGGCATCGATGCGCTTGCCGAAATTCAAAAGCGCACTGGGATGCAA CGACCAACGGTGATCACTTGA
Upstream 100 bases:
>100_bases CCGCCCATTCCCCAACAACTGAGCTGCACCTCAGATCCTCTCAATGATCTTTGCGAACACTAGCCGCGAGAACTGGAGGG GGCCAAAACAGGATCGATGA
Downstream 100 bases:
>100_bases TCTCAGCGCAGCCACCACTCCCGTGGGCGGCGGTGATACTCCGCCTCGGTGCTGCTTTGTTGCAGCTGGCGCATGCTTTC AATGACCACTGCTCCAAGCG
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MRLIRFDEELPSSLMTSSAQTGPTQRQVHLNTPFNDQKPGTSGLRKSSKQFEQTNYLESFIEAIFQTLPGVEGGTLILGG DGRYGNHRAIDVILRMGAAHGLSRVITTTNGILSTPAASHLIRANKAIGGIILSASHNQGGPDGDFGVKVNGANGGPAAE SLTNAIYACSQALEKYSLVDADVIPLETPGHHAIGGMTVDVIDGVEDYVELMQKLFDFGRIKDLIKTDFPVVFDAMHAVT GPYAKRLLEGLLGAPTGTVRNGVPLEDFGGGHPDPNLTYAAELADLLLNGKAYSFGAACDGDGDRNMILGRGCFVNPSDS LAILAANANVAPAYADGLAGVARSMPTSAAVDVVAKQLNIDCFETPTGWKFFGNLLDAGRITLCGEESFGTGSNHVREKD GLWAVLFWLQILAERRCSVADVMTQHWSRFGRHYYSRHDYEAIASENAHGLYNRLESMLPRLIGQPFAGRQVSQADNFSY SDPVDGSETQSQGLRILLEDGSRVVVRLSGTGTKGATLRVYLECYEPSHGNLNQDPQHALADLINGIDALAEIQKRTGMQ RPTVIT
Sequences:
>Translated_566_residues MRLIRFDEELPSSLMTSSAQTGPTQRQVHLNTPFNDQKPGTSGLRKSSKQFEQTNYLESFIEAIFQTLPGVEGGTLILGG DGRYGNHRAIDVILRMGAAHGLSRVITTTNGILSTPAASHLIRANKAIGGIILSASHNQGGPDGDFGVKVNGANGGPAAE SLTNAIYACSQALEKYSLVDADVIPLETPGHHAIGGMTVDVIDGVEDYVELMQKLFDFGRIKDLIKTDFPVVFDAMHAVT GPYAKRLLEGLLGAPTGTVRNGVPLEDFGGGHPDPNLTYAAELADLLLNGKAYSFGAACDGDGDRNMILGRGCFVNPSDS LAILAANANVAPAYADGLAGVARSMPTSAAVDVVAKQLNIDCFETPTGWKFFGNLLDAGRITLCGEESFGTGSNHVREKD GLWAVLFWLQILAERRCSVADVMTQHWSRFGRHYYSRHDYEAIASENAHGLYNRLESMLPRLIGQPFAGRQVSQADNFSY SDPVDGSETQSQGLRILLEDGSRVVVRLSGTGTKGATLRVYLECYEPSHGNLNQDPQHALADLINGIDALAEIQKRTGMQ RPTVIT >Mature_566_residues MRLIRFDEELPSSLMTSSAQTGPTQRQVHLNTPFNDQKPGTSGLRKSSKQFEQTNYLESFIEAIFQTLPGVEGGTLILGG DGRYGNHRAIDVILRMGAAHGLSRVITTTNGILSTPAASHLIRANKAIGGIILSASHNQGGPDGDFGVKVNGANGGPAAE SLTNAIYACSQALEKYSLVDADVIPLETPGHHAIGGMTVDVIDGVEDYVELMQKLFDFGRIKDLIKTDFPVVFDAMHAVT GPYAKRLLEGLLGAPTGTVRNGVPLEDFGGGHPDPNLTYAAELADLLLNGKAYSFGAACDGDGDRNMILGRGCFVNPSDS LAILAANANVAPAYADGLAGVARSMPTSAAVDVVAKQLNIDCFETPTGWKFFGNLLDAGRITLCGEESFGTGSNHVREKD GLWAVLFWLQILAERRCSVADVMTQHWSRFGRHYYSRHDYEAIASENAHGLYNRLESMLPRLIGQPFAGRQVSQADNFSY SDPVDGSETQSQGLRILLEDGSRVVVRLSGTGTKGATLRVYLECYEPSHGNLNQDPQHALADLINGIDALAEIQKRTGMQ RPTVIT
Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=569, Percent_Identity=50.4393673110721, Blast_Score=571, Evalue=1e-163, Organism=Homo sapiens, GI21361621, Length=552, Percent_Identity=50.7246376811594, Blast_Score=561, Evalue=1e-160, Organism=Homo sapiens, GI133922562, Length=556, Percent_Identity=47.6618705035971, Blast_Score=503, Evalue=1e-142, Organism=Homo sapiens, GI290463104, Length=366, Percent_Identity=53.0054644808743, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI239741729, Length=123, Percent_Identity=45.5284552845528, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI239743670, Length=114, Percent_Identity=46.4912280701754, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1786904, Length=425, Percent_Identity=27.2941176470588, Blast_Score=87, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17535441, Length=559, Percent_Identity=49.3738819320215, Blast_Score=521, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6323752, Length=578, Percent_Identity=43.7716262975779, Blast_Score=472, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6322722, Length=560, Percent_Identity=44.1071428571429, Blast_Score=452, Evalue=1e-128, Organism=Drosophila melanogaster, GI17864244, Length=558, Percent_Identity=47.6702508960573, Blast_Score=520, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 60776; Mature: 60776
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIRFDEELPSSLMTSSAQTGPTQRQVHLNTPFNDQKPGTSGLRKSSKQFEQTNYLESF CCEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IEAIFQTLPGVEGGTLILGGDGRYGNHRAIDVILRMGAAHGLSRVITTTNGILSTPAASH HHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LIRANKAIGGIILSASHNQGGPDGDFGVKVNGANGGPAAESLTNAIYACSQALEKYSLVD HHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC ADVIPLETPGHHAIGGMTVDVIDGVEDYVELMQKLFDFGRIKDLIKTDFPVVFDAMHAVT CCEEECCCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GPYAKRLLEGLLGAPTGTVRNGVPLEDFGGGHPDPNLTYAAELADLLLNGKAYSFGAACD CHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCC GDGDRNMILGRGCFVNPSDSLAILAANANVAPAYADGLAGVARSMPTSAAVDVVAKQLNI CCCCCCEEEECCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC DCFETPTGWKFFGNLLDAGRITLCGEESFGTGSNHVREKDGLWAVLFWLQILAERRCSVA EEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCHHH DVMTQHWSRFGRHYYSRHDYEAIASENAHGLYNRLESMLPRLIGQPFAGRQVSQADNFSY HHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SDPVDGSETQSQGLRILLEDGSRVVVRLSGTGTKGATLRVYLECYEPSHGNLNQDPQHAL CCCCCCCCCHHCCCEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHH ADLINGIDALAEIQKRTGMQRPTVIT HHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRLIRFDEELPSSLMTSSAQTGPTQRQVHLNTPFNDQKPGTSGLRKSSKQFEQTNYLESF CCEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IEAIFQTLPGVEGGTLILGGDGRYGNHRAIDVILRMGAAHGLSRVITTTNGILSTPAASH HHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LIRANKAIGGIILSASHNQGGPDGDFGVKVNGANGGPAAESLTNAIYACSQALEKYSLVD HHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC ADVIPLETPGHHAIGGMTVDVIDGVEDYVELMQKLFDFGRIKDLIKTDFPVVFDAMHAVT CCEEECCCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GPYAKRLLEGLLGAPTGTVRNGVPLEDFGGGHPDPNLTYAAELADLLLNGKAYSFGAACD CHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCC GDGDRNMILGRGCFVNPSDSLAILAANANVAPAYADGLAGVARSMPTSAAVDVVAKQLNI CCCCCCEEEECCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC DCFETPTGWKFFGNLLDAGRITLCGEESFGTGSNHVREKDGLWAVLFWLQILAERRCSVA EEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCHHH DVMTQHWSRFGRHYYSRHDYEAIASENAHGLYNRLESMLPRLIGQPFAGRQVSQADNFSY HHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SDPVDGSETQSQGLRILLEDGSRVVVRLSGTGTKGATLRVYLECYEPSHGNLNQDPQHAL CCCCCCCCCHHCCCEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHH ADLINGIDALAEIQKRTGMQRPTVIT HHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7959036; 2307661 [H]